Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_026588.1 Length=60285 Score E Sequences producing significant alignments: (Bits) Value seq49917 832 0.0 seq50663 473 5e-129 seq38559 282 2e-71 seq45035 107 7e-19 seq45817 105 3e-18 seq42881 102 3e-17 seq43497 87.8 7e-13 >seq49917 Length=2087 Score = 832 bits (922), Expect = 0.0 Identities = 937/1250 (75%), Gaps = 7/1250 (1%) Strand=Plus/Plus Query 14961 CCTCTCATCCCTTTGTTCATGGACTGCAAAAAGACGATGGTCGGTGTCATCGTCGAGACA 15020 || || |||| |||||||||||||| || || ||||||| ||| | ||||| Sbjct 67 CCACTGATCCAGATGTTCATGGACTGCCGCAACACCCTGGTCGGGGTCGAGATGGAGACC 126 Query 15021 GCCGGTTTGCGGTATGCGTTCTACACGAAGAACCACACCTACGAGTACCGCGACAGCGCA 15080 ||||| || | |||||||| ||| ||| |||| ||| | |||| Sbjct 127 GCCGGCAGCCGACAGAACTTCTACACCAAGGTTCACCGCTACCGCTACGAAAAGGGCGCG 186 Query 15081 TGGACCGGCACCGCTGAACTGCGCGGTATCCGCGACATCCTCAATTACTACGTGATTTGG 15140 ||||| |||| | || ||||||| || | |||||||| || ||||||||||| ||| Sbjct 187 TGGACAGGCAATGTCGAGATGCGCGGCATTTGGGACATCCTGAACTACTACGTGATCTGG 246 Query 15141 CCGTCGTGGTGGCTGCCGATTCAGGCACAGCCGTTCTCGCACGCGATCTTCGTGTGGGCG 15200 ||| |||||||||| || || || ||||| | |||||||| |||||| | |||||| Sbjct 247 CCGACGTGGTGGCTTCCCCTTGCCGCCCAGCCCATTTCGCACGCAATCTTCATCTGGGCG 306 Query 15201 CTGCAAACCGTCGTGGAGAACATGGTCGCAGAATGCGCTCTGCGGTTGCAGTCCGGGTGG 15260 || | ||| |||||||||||||||||| |||||||| ||||| | |||||||||||| Sbjct 307 CTACCGACCTGCGTGGAGAACATGGTCGCCGAATGCGCGCTGCGCATCCAGTCCGGGTGG 366 Query 15261 CTGGAGTTCATCAACAACGGCCTGTCGTTAAACC---CGG--ATATCCGGGCATGGTTCG 15315 ||||||||| ||||||||| |||||| | || ||| | |||||||||||| | | Sbjct 367 CTGGAGTTCGTCAACAACGCCCTGTCCCTCCACGGAACGGCGACATCCGGGCATGGATGG 426 Query 15316 GCACCGTTCTGCAAGCCCTGTCGCGGGACGGGCTGTCGGTCCAGGCGTTCACCCGCATGC 15375 ||||| | |||||||||| ||| ||| ||| ||||| ||| | ||| | |||| Sbjct 427 GCACCATCTTGCAAGCCCTCAAGCGCGACAAGCTCTCGGTGCAGACCTTCGGCAAGATGC 486 Query 15376 TGCGAACCCCGGTGTATGTGTCACGCACCAATCCACTGCTGGACACGTCGCCGATGGTCG 15435 |||| ||||| |||||| |||||||| || | |||||||| ||||| ||| || Sbjct 487 TGCGCACCCCCACCTATGTGCAGCGCACCAACCCGTTCCTGGACACATCGCCCATGTGCG 546 Query 15436 CGCGGACAGTGCGGATGGAAACCGTTCAGGCCG-TCATCAAGGACGTTACCCAGTCGTAC 15494 | ||| || || ||||||||| | | | || |||||||||| || |||| | ||| Sbjct 547 CCAAGACCGTTCGCATGGAAACC-TGCGGAACGGTCATCAAGGATGTCACCCGCGCCTAC 605 Query 15495 GGTGTGGATACCCGCATGGATTTGTGGCTTCCAGGTGATCCGCAGCCTGACAGGTGGGCG 15554 |||||||| ||||||||||| |||||| || ||||| ||||| || |||| |||||| Sbjct 606 GGTGTGGACACCCGCATGGACCTGTGGCGCCCGGGTGACCCGCAACCGGACAAGTGGGCC 665 Query 15555 AACCTGGACCAGCCTACCTACGTGTTTTCCACGGTGGACAGGTCGCAGATCACTGGTCCG 15614 ||||| || ||| ||||||||||||||||| |||| | ||||||| | || || Sbjct 666 AACCTCGATTCGCCCACCTACGTGTTTTCCACCCGGGACCGCCAGCAGATCTCGGGGCCC 725 Query 15615 ACGAAAACCGTGCTTGATTCGGTGCTGCGCACCACGATTGACCTTGGCGGCTCGCTGGGG 15674 || |||||||| ||||||||| | || ||| ||||| ||||| || || || Sbjct 726 ACCAAAACCGTTGCCGATTCGGTGATCAAGACGGTGATCGACCTCGGCGGATCACTCGGT 785 Query 15675 GACATCTTCAAACCGGTCATCAAGCAGGTTCCCGGCATGGACGGCGTGTTTTATGCGCCC 15734 ||||||||||| || |||||| ||||||| ||||| ||| |||| ||||| || || ||| Sbjct 786 GACATCTTCAAGCCAGTCATCCAGCAGGTACCCGGTATGAACGGGGTGTTCTACGCCCCC 845 Query 15735 GCGTTGGGTGTGGATTTCGAGCAGCCATACGCCTATTTCGTGGCGCCTGAGCCGGGTGAG 15794 | | ||||| |||||||||||||| |||||||| |||| || || || ||| ||| Sbjct 846 AAGCTCGGTGTCGATTTCGAGCAGCCCTACGCCTACGTCGTCGCCCCCGAAGAGGGCGAG 905 Query 15795 GACACCGGTATCGATGCGTGCACGATCACTGACCACACCCCTGAGGGGTGGCAGCACATT 15854 ||| || ||| ||| ||| | ||||||||||| ||||| ||||| ||||| Sbjct 906 GACTCCAACATCATCAACTGCGAAATCGCCGACCACACCCCCGAGGGCTGGCAACACATC 965 Query 15855 ATTGGTGGCCGTTCCCCAAAGTGGTTGAACGACTTGATGAATGCCACCTTCGCATGGCTA 15914 || || |||||||| |||||||||||||||||||| |||||||||||||||||| || Sbjct 966 ATCGGCGGCCGTTCTCCAAAGTGGTTGAACGACTTAATGAATGCCACCTTCGCAGGGTGG 1025 Query 15915 ATCGACTCGCTGATGATCGTTGTTGGATTCACCGGCATACCGTCCGATCTGCTGTCGGGG 15974 || | |||||||||||||| || || ||| ||||||| ||||| |||||||| ||||| Sbjct 1026 ATGTATTCGCTGATGATCGTGGTCGGGTTCTCCGGCATCCCGTCGGATCTGCTCTCGGGA 1085 Query 15975 TTCCTGAACAACAGCTTCCTGGCGTTCCAGTTGATTCAGCACTACGACCGGCGTGATGAT 16034 |||||||||||||||||||||||||||||| || | ||| ||| | || || || Sbjct 1086 TTCCTGAACAACAGCTTCCTGGCGTTCCAGATGGTCCAGGTGTACCAGGTCCGCGACGAG 1145 Query 16035 GTTGGCCCGTACCATCCGGCGATCGAGCGGTTCTATCCGACAGCTTCGGCGCCGTACAAC 16094 || ||||| | ||||||||||||||||||||||| ||||| || || ||||||||| Sbjct 1146 GTGGGCCCTTTTCATCCGGCGATCGAGCGGTTCTACCCGACCGCCAGCGCCCCGTACAAC 1205 Query 16095 ATCGAAACGGTGTTTGCATTCATCAACGCTTTGTTTGATTCGCAGGGCAAGACGACGGCG 16154 |||||||| |||| || ||||||||||| | || ||| | || || || |||||| Sbjct 1206 ATCGAAACCATGTTCGCGTTCATCAACGCGATTTTCGATGCCCAAGGTGCTACCACGGCG 1265 Query 16155 ACTGTGCAGTTCCGCAACGGTGCCCAGTATGCGTTGGGCCGTAACGTTTT 16204 || ||||||||||||| ||| ||||| || ||||| || |||| Sbjct 1266 CAGGTCACTTTCCGCAACGGTGACCAATATGCCTTAGGCCGAGACATTTT 1315 >seq50663 Length=1982 Score = 473 bits (524), Expect = 5e-129 Identities = 472/609 (78%), Gaps = 2/609 (0%) Strand=Plus/Plus Query 15693 ATCAAGCAGGTTCCCGGCATGGACGGCGTGTTTTATGCGCCCGCGTTGGGTGTGGATTTC 15752 || ||||| | |||||||||||||| |||||||| ||||| | |||||| | ||| Sbjct 1330 ATGAAGCAAGACCCCGGCATGGACGGGGTGTTTTACGCGCCGCTACTCGGTGTGAACTTC 1389 Query 15753 GAGCAGCCATACGCCTATTTCGTGGCGCCTGAGCCGGGTGAGGACACCGGTATCGATGCG 15812 ||||| || ||||||||| | || ||||| || | ||||||||| | ||| || Sbjct 1390 GAGCAACCCTACGCCTATCTTGTTGCGCCAGAATCCGGTGAGGACTCATCCATCACCTCG 1449 Query 15813 TGCACGATCACTGACCACACCCCTGAGGGGTGGCAGCACATTATTGGTGGCCGTTCCCCA 15872 ||| |||||| |||| ||||| ||||| ||||||||||| || ||||||||| ||| Sbjct 1450 TGCCGGATCACCAACCATACCCCCGAGGGTTGGCAGCACATCATCGGTGGCCGTAGCCCT 1509 Query 15873 AAGTGGTTGAACGACTTGATGAATGCCACCTTCGCATGGCTAATCGACTCGCTGATGATC 15932 ||||||||||||||||||||||||||||| ||||| ||| | ||||| |||||||||||| Sbjct 1510 AAGTGGTTGAACGACTTGATGAATGCCACGTTCGCGTGGTTGATCGATTCGCTGATGATC 1569 Query 15933 GTTGTTGGATTCACCGGCATACCGTCCGATCTGCTGTCGGGGTTCCTGAACAACAGCTTC 15992 || || || ||| |||| || || || || ||||| || || |||||||||||||||||| Sbjct 1570 GTGGTCGGGTTCTCCGGTATCCCATCAGACCTGCTATCCGGCTTCCTGAACAACAGCTTC 1629 Query 15993 CTGGCGTTCCAGTTGATTCAGCACTACGACCGGCGTGATGATGTTGGCCCGTACCATCCG 16052 ||||| |||||| | | |||||||||||||| || || || || ||||| ||||| || Sbjct 1630 CTGGCCTTCCAGCTCCTGCAGCACTACGACCGACGCGACGAAGTCGGCCCCTACCACCCA 1689 Query 16053 GCGATCGAGCGGTTCTATCCGACAGCTTCGGCGCCGTACAACATCGAAACGGTGTTTGCA 16112 ||| ||||||| |||||||| || || || || || |||||||||||||| || || || Sbjct 1690 GCGGTCGAGCGCTTCTATCCCACCGCATCAGCCCCCTACAACATCGAAACAGTATTCGCG 1749 Query 16113 TTCATCAACGCTTTGTTTGATTCGCAGGGCAAGACGACGGCGACTGTGCAGTTCCGCAAC 16172 ||||||||||| | |||||||| |||||| | || || || || ||||||||| Sbjct 1750 TTCATCAACGCCCTCTTTGATTCACAGGGCTACACCACCGCACAAGTCACGTTCCGCAAT 1809 Query 16173 GGTGCCCAGTATGCGTTGGGCCGTAACGTTTTTCGCGGCGGCCTGATGTCGCTGGTGT-T 16231 |||| ||| || || ||||| | ||||||| ||||| |||||||| | || | Sbjct 1810 GGTGACCAATACGCCTTGGGAAGAGACGTTTTCAAGGGCGGATTGATGTCGGTCGTCTAC 1869 Query 16232 CATGTCGCGTACCCGCATGGTGACTGACTACATCGAGAACGTGATGTGGCGGGTTACCCA 16291 || | | || ||| ||||| || ||||||||||||||||| |||||||| | || | Sbjct 1870 CACGGC-CGAACCAAGATGGTCACCGACTACATCGAGAACGTCATGTGGCGCATCACTCC 1928 Query 16292 GGATGAGCG 16300 |||||||| Sbjct 1929 AGATGAGCG 1937 Score = 174 bits (192), Expect = 6e-39 Identities = 203/274 (74%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 15249 CAGTCCGGGTGGCTGGAGTTCATCAACAACGGCCTGTCGTTAAACCCGGATATCCGGGCA 15308 ||||| |||||| |||| ||| |||||||| || ||||| ||||| || ||||| ||| Sbjct 894 CAGTCGGGGTGGATGGAAGCCATTAACAACGGGCTCTCGTTGAACCCCGACATCCGTGCA 953 Query 15309 TGGTTCGGCACCGTTCTGCAAGCCCTGTCGCGGGACGGGCTGTCGGTCCAGGCGTTCACC 15368 |||||||||||| | |||||||||||| || || || |||||| | || | ||| | Sbjct 954 TGGTTCGGCACCATCCTGCAAGCCCTGGACCGCGATGGCCTGTCGATTAAGACCTTCGCG 1013 Query 15369 CGCATGCTGCGAACCCCGGTGTATGTGTCACGCACCAATCCACTGCTGGACACGTCGCCG 15428 |||||||| || || || |||||| || ||||| || | |||||||| || ||| Sbjct 1014 CGCATGCTACGCACGCCAACGTATGTCAAGCGAACCAACCCGTTCCTGGACACATCCCCG 1073 Query 15429 ATGGTCGCGCGGACAGTGCGGATGGAAACCGTTCAGGCCGTCATCAAGGACGTTACCCAG 15488 || || ||| || || ||||| |||||| | || |||||||| || || | Sbjct 1074 TTGTGTGCCAAGACCGTCCGCATGGAGACCGTTGGCTCGGTAATCAAGGATGTCACGCGA 1133 Query 15489 TCGTACGGTGTGGATACCCGCATGGATTTGTGGC 15522 | |||||||| |||||||| |||||| |||||| Sbjct 1134 GCCTACGGTGTAGATACCCGTATGGATCTGTGGC 1167 Score = 141 bits (156), Expect = 4e-29 Identities = 234/338 (69%), Gaps = 0/338 (0%) Strand=Plus/Plus Query 14847 TGCGACAAGTTTTGGCAGCCGATGGGCGCTGTCGGTGGCGACCTGATCGAGGCGTCGGGT 14906 |||| |||||| ||| || ||||| |||| ||| || || ||||||||||| Sbjct 479 TGCGGCAAGTTCTGGACACCCATGGGGTTAATCGGCAACGAACTCATGGAGGCGTCGGGG 538 Query 14907 GCTGACCCGCGCAACGATGTTGAAACCGGCCGGATCGTCCTCAAAGGGAACAGCCCTCTC 14966 | || || || || || |||| ||||||| | ||| || | ||||||||| Sbjct 539 ACCGATCCCCGTAATGACTGCCCTACCGCCCGGATCAAGCACAAGGGTGATAGCCCTCTC 598 Query 14967 ATCCCTTTGTTCATGGACTGCAAAAAGACGATGGTCGGTGTCATCGTCGAGACAGCCGGT 15026 | | |||||||||||||| || |||||||| || | || ||||| || || Sbjct 599 GTGCAGATGTTCATGGACTGCCGGAACACGATGGTGGGCATTGAGGTAGAGACCGCGGGG 658 Query 15027 TTGCGGTATGCGTTCTACACGAAGAACCACACCTACGAGTACCGCGACAGCGCATGGACC 15086 ||||| | |||||| || || ||| || ||||||| ||| |||| ||||| Sbjct 659 CTGCGGCAGAACTTCTACGTCAAAAAGCACGACTGGGAGTACCAAGACGGCGCTTGGACG 718 Query 15087 GGCACCGCTGAACTGCGCGGTATCCGCGACATCCTCAATTACTACGTGATTTGGCCGTCG 15146 || || | ||| || |||||| | ||||| ||||| || |||||||| |||||||| Sbjct 719 GGAACTGTTGAGGCCCGGGGTATCTGGGACATACTCAACTATTACGTGATATGGCCGTCA 778 Query 15147 TGGTGGCTGCCGATTCAGGCACAGCCGTTCTCGCACGC 15184 |||||||| || ||||| | |||||| || ||||| Sbjct 779 TGGTGGCTACCCCCACAGGCCCCGCCGTTTTCTCACGC 816 >seq38559 Length=768 Score = 282 bits (312), Expect = 2e-71 Identities = 286/370 (77%), Gaps = 2/370 (1%) Strand=Plus/Plus Query 15914 AATCGACTCGCTGATGATCGTTGTTGGATTCACCGGCATACCGTCCGATCTGCTGTCGGG 15973 |||||| ||||||||||||| || || ||| |||| || || || || ||||| || || Sbjct 388 AATCGATGCGCTGATGATCGTGGTCGGGTTCTCCGGTATCCCATCAGACCTGCTATCCGG 447 Query 15974 GTTCCTGAACAACAGCTTCCTGGCGTTCCAGTTGATTCAGCACTACGACCGGCGTGATGA 16033 ||||||||||||||||||||||| |||||| | || |||||||||||||| || || || Sbjct 448 CTTCCTGAACAACAGCTTCCTGGCCTTCCAGCTCATGCAGCACTACGACCGACGCGACGA 507 Query 16034 TGTTGGCCCGTACCATCCGGCGATCGAGCGGTTCTATCCGACAGCTTCGGCGCCGTACAA 16093 || ||||| ||||| || ||| ||||||| |||||||| || || || || || ||||| Sbjct 508 AGTCGGCCCCTACCACCCAGCGGTCGAGCGCTTCTATCCCACCGCATCAGCCCCCTACAA 567 Query 16094 CATCGAAACGGTGTTTGCATTCATCAACGCTTTGTTTGATTCGCAGGGCAAGACGACGGC 16153 ||||||||| || || || ||||||||||| | |||||||| |||||| | || || || Sbjct 568 CATCGAAACAGTATTCGCGTTCATCAACGCCCTCTTTGATTCACAGGGCTACACCACCGC 627 Query 16154 GACTGTGCAGTTCCGCAACGGTGCCCAGTATGCGTTGGGCCGTAACGTTTTTCGCGGCGG 16213 || ||||||||| |||| ||| || || ||||| | ||||||| ||||| Sbjct 628 ACAAGTCACGTTCCGCAATGGTGACCAATACGCCTTGGGAAGAGACGTTTTCAAGGGCGG 687 Query 16214 CCTGATGTCGCTGGTGT-TCATGTCGCGTACCCGCATGGTGACTGACTACATCGAGAACG 16272 |||||||| | || | || | | || ||| ||||| || |||||| ||||||||| Sbjct 688 ATTGATGTCGGTCGTCTACCACGGC-CGAACCAAGATGGTCACCGACTACCTCGAGAACG 746 Query 16273 TGATGTGGCG 16282 | |||||||| Sbjct 747 TCATGTGGCG 756 Score = 154 bits (170), Expect = 6e-33 Identities = 198/273 (73%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 15525 CCAGGTGATCCGCAGCCTGACAGGTGGGCGAACCTGGACCAGCCTACCTACGTGTTTTCC 15584 || |||||| |||||| || |||| | ||| || || || || || || ||||| Sbjct 1 CCCGGTGATGAGCAGCCCGATCAGTGGATCACCCTCGATCAACCCACATATGTCTTTTCG 60 Query 15585 ACGGTGGACAGGTCGCAGATCACTGGTCCGACGAAAACCGTGCTTGATTCGGTGCTGCGC 15644 || || ||| | || ||| || || || ||||| || ||||||||||| |||| Sbjct 61 ACTGTCGACCGCAGCCAAATCGAAGGCCCCACAAAAACTGTCCTTGATTCGGTCTTGCGG 120 Query 15645 ACCACGATTGACCTTGGCGGCTCGCTGGGGGACATCTTCAAACCGGTCATCAAGCAGGTT 15704 || | ||||| || || ||||| || | |||||||| |||||||| ||||| || Sbjct 121 ACGGTAGTGGACCTGGGTGGATCGCTCGGCGGGATCTTCAAGCCGGTCATGAAGCAAGTC 180 Query 15705 CCCGGCATGGACGGCGTGTTTTATGCGCCCGCGTTGGGTGTGGATTTCGAGCAGCCATAC 15764 |||||||||||||| ||||| || ||||| | |||||| | |||||||| || ||| Sbjct 181 CCCGGCATGGACGGGGTGTTCTACGCGCCGCTACTCGGTGTGAACTTCGAGCAACCCTAC 240 Query 15765 GCCTATTTCGTGGCGCCTGAGCCGGGTGAGGAC 15797 |||||| | || ||||| || | ||||||||| Sbjct 241 GCCTATCTTGTTGCGCCAGAATCCGGTGAGGAC 273 >seq45035 Length=256 Score = 107 bits (118), Expect = 7e-19 Identities = 119/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 14213 TATGACGGTCCCGGCGCGGATGAGTATGTGGAGTTTGGTCCGCTGCTGCCCAATCAGATT 14272 || ||||| |||||| |||| | ||||| || || || |||||||| ||||||||| | Sbjct 59 TACGACGGGCCCGGCTCGGACCAATATGTCGAATTCGGGCCGCTGCTACCCAATCAGGTG 118 Query 14273 GTGTTCCTACGTACCGACCCGCGCTCACAGACGACGTTGGTGCAGGATTTGACGTCGGTG 14332 ||||| | || ||||| |||||| || || || |||||| | || | || |||||| Sbjct 119 GTGTTTTTGCGCACCGATCCGCGCGTGCACACCACCTTGGTGAAAGACCTAACCTCGGTG 178 Query 14333 CCGCCGTCGCCGCAGGAGTTGAACATTTTCCAGCAGGCG 14371 ||||| || |||||||| | | | |||||| ||||| Sbjct 179 CCGCCCTCACCGCAGGAACTCGATTTGTTCCAGGAGGCG 217 >seq45817 Length=532 Score = 105 bits (116), Expect = 3e-18 Identities = 202/294 (69%), Gaps = 23/294 (8%) Strand=Plus/Minus Query 32383 ACCAGCCGGTCCGGGTCGTGATGATCGACGGCGAGCCGTGGTTCGTCCTCGCCGACCTCT 32442 |||| |||| |||||||| | |||| |||||| || ||||||||||| || ||||||| Sbjct 287 ACCATTCGGTGCGGGTCGTCGTTATCGGCGGCGAACCCTGGTTCGTCCTGGCTGACCTCT 228 Query 32443 GCAAGGTGCTCGACATCCG--CAA-------CGTCAAGGACGTTCGGGATCGCTTAGCGG 32493 |||||||||| | ||| | | ||||| ||| ||| | | ||| | | Sbjct 227 GCAAGGTGCTGGGCATTTTGTCGAGTAGTGCCGTCACGGATGTTAAGAAGCGCCTTGACC 168 Query 32494 ATGGGG---TAGATCAGACCTACCCCATCGCTGACAGCCTCGGTCGTACGCA-GCAGGCG 32549 | || | ||| |||| | || || ||||| || | || || | | Sbjct 167 AGGGCACTCTGGATTCGACCAAGGTTAT----GAA---CTCGGCCGGATACATGCGTGAG 115 Query 32550 ACC---ATCGTGTCCGAGTCGGGCATGTACGAGGTCGTCATCCGCTCCGACAAGCCAGAG 32606 ||| ||||||||||| |||||||||||||||||||||| ||||| |||||||| ||| Sbjct 114 ACCGACATCGTGTCCGAAGCGGGCATGTACGAGGTCGTCATACGCTCGGACAAGCCCGAG 55 Query 32607 GCTGTCAAGTTTCGCCGCTGGATCACCGGCGAGGTGCTGCCTGCAATCCGCAAG 32660 |||||| |||| || || | | || || ||| ||||| | ||||| ||| Sbjct 54 GCTGTCGAGTTCCGGCGTTTCGTTACGGGTACGGTTCTGCCCTCCATCCGAAAG 1 >seq42881 Length=1721 Score = 102 bits (112), Expect = 3e-17 Identities = 149/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 11391 TGGGGCAGATCGGCGCCCAGCTGGATCAGGATTTCGGTATCTCGAAGGGTTTGGCGGGGA 11450 ||||| |||| |||||| |||||||| || ||||| ||| ||||| | | || Sbjct 1488 TGGGGGAGATTGGCGCCAAGCTGGATGCCGACTTCGGCGCCTCCAAGGGCCTCGGTGGAC 1547 Query 11451 TCGCGGAGAACATCACGAAGTTCGTGGCGAACCTCGCTGCGGCACCGTTGTTGGGTCAGT 11510 | || ||||| | ||||||||||| ||||| ||||| || ||| || | || ||| Sbjct 1548 TTGCCGAGAATCTAACGAAGTTCGTCGCGAATCTCGCGTTCGCGCCGATGCTTGGGCAGC 1607 Query 11511 TGCAG-GCCATTTCGGCCTATAACCCGACTCAGGGTGGTCACGGTTTGATGGGTGTCCTC 11569 | ||| || || ||| ||||| | |||| || |||| ||||||| ||||| Sbjct 1608 T-CAGCGCTATAAGCGCCGCCAACCCCTCCAAGGGCGGATACGGGATGATGGGCATCCTC 1666 Query 11570 GCGGCGCAGGGTGTGTTCGGTCCGCAGT 11597 | |||||||||||| ||||| ||||||| Sbjct 1667 GGGGCGCAGGGTGTATTCGGGCCGCAGT 1694 >seq43497 Length=1050 Score = 87.8 bits (96), Expect = 7e-13 Identities = 190/282 (67%), Gaps = 18/282 (6%) Strand=Plus/Plus Query 17278 GTTTTCGGTTGAGGTTTTGCCGCTGTCATGACGTCTTCGTTTGATCCGTTGCCGGAGTGG 17337 ||||| || ||||||| ||||||||| ||| || | || || || ||| Sbjct 3 GTTTTGGGCTGAGGTTCTGCCGCTGT---GACATCGGGGATT---------CCCGAATGG 50 Query 17338 GCTCATGCGGTGCCGTCTGAGCCGGGTATTCACCCGGAGCAGTCGGCGTTGCAGTGGCAG 17397 || || ||| | ||||||| || | | || | ||||||| | | || || || Sbjct 51 GCGCAGGCGATCCCGTCTGCCCCAG---TCCATCAGGAGCAGCC--CAATGAGCTGACA- 104 Query 17398 CGTCCGTTCACTGTTCAGCAGCTGCTTGAGATTGGTGAGCAGTTCATCGAGCAGTTTTTG 17457 || |||||||| | |||||||| ||||| | ||||| ||| ||||||||||||| || Sbjct 105 CGGCCGTTCACGGCGCAGCAGCTCATTGAGTTCGGTGAACAGCTCATCGAGCAGTTCCTG 164 Query 17458 GCGTGGGTGGTGCGCGCGGTCGCTGGGGTGTTCATCCCTGGTGAGGCGTCGTTCGACCAG 17517 | | || || | || || | || |||||||| ||||| | |||||||| ||| Sbjct 165 CGGCGCGTAGTCCTGGCCGTGGTCGGCTCATTCATCCCCGGTGAAGGCTCGTTCGAGCAG 224 Query 17518 TTGCGTGATTGGGCTTTGAACATCCCCATTCTCGGGGACATC 17559 || || ||||| | | ||||||||| | || ||||| Sbjct 225 CTGGAGGAATGGGCATACAGCATCCCCATCATAGGCCACATC 266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 192674213660500