Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_026604.1 Length=53636 Score E Sequences producing significant alignments: (Bits) Value seq49917 857 0.0 seq50663 497 4e-136 seq38559 304 4e-78 seq45035 107 7e-19 seq43497 91.5 5e-14 >seq49917 Length=2087 Score = 857 bits (950), Expect = 0.0 Identities = 945/1252 (75%), Gaps = 11/1252 (1%) Strand=Plus/Plus Query 14884 CCTCTCATCCCTTTGTTCATGGACTGCAAAAAGACGATGGTCGGTGTCATCGTCGAGACA 14943 || || |||| |||||||||||||| || || ||||||| ||| | ||||| Sbjct 67 CCACTGATCCAGATGTTCATGGACTGCCGCAACACCCTGGTCGGGGTCGAGATGGAGACC 126 Query 14944 GCCGGTTTGCGGTATGCGTTCTACACGAAGAACCACACCTACGAGTACCGCGACAGCGCA 15003 ||||| || | |||||||| ||| ||| |||| ||| | |||| Sbjct 127 GCCGGCAGCCGACAGAACTTCTACACCAAGGTTCACCGCTACCGCTACGAAAAGGGCGCG 186 Query 15004 TGGACCGGCACCGCTGAACTGCGCGGTATCCGCGACATCCTCAATTACTACGTGATTTGG 15063 ||||| |||| | || ||||||| || | |||||||| || ||||||||||| ||| Sbjct 187 TGGACAGGCAATGTCGAGATGCGCGGCATTTGGGACATCCTGAACTACTACGTGATCTGG 246 Query 15064 CCGTCGTGGTGGCTGCCGATTCAGGCACAGCCGTTCTCGCACGCGATCTTCGTGTGGGCG 15123 ||| |||||||||| || || || ||||| | |||||||| |||||| | |||||| Sbjct 247 CCGACGTGGTGGCTTCCCCTTGCCGCCCAGCCCATTTCGCACGCAATCTTCATCTGGGCG 306 Query 15124 CTGCAAACCGTCGTGGAGAACATGGTCGCAGAATGCGCTCTGCGGTTGCAGTCCGGGTGG 15183 || | ||| |||||||||||||||||| |||||||| ||||| | |||||||||||| Sbjct 307 CTACCGACCTGCGTGGAGAACATGGTCGCCGAATGCGCGCTGCGCATCCAGTCCGGGTGG 366 Query 15184 CTGGAGTTCATCAACAACGGCCTGTCGTTAAACC---CGG--ATATCCGGGCATGGTTCG 15238 ||||||||| ||||||||| |||||| | || ||| | |||||||||||| | | Sbjct 367 CTGGAGTTCGTCAACAACGCCCTGTCCCTCCACGGAACGGCGACATCCGGGCATGGATGG 426 Query 15239 GCACCGTGTTGCAAGCCCTGTCGCGGGACGGGCTGTCGGTCCAGGCGTTCACCCGCATGC 15298 ||||| | ||||||||||| ||| ||| ||| ||||| ||| | ||| | |||| Sbjct 427 GCACCATCTTGCAAGCCCTCAAGCGCGACAAGCTCTCGGTGCAGACCTTCGGCAAGATGC 486 Query 15299 TGCGAACCCCGGTGTATGTGTCACGCACCAATCCACTGCTGGACACGTCGCCGATGGTGG 15358 |||| ||||| |||||| |||||||| || | |||||||| ||||| ||| | Sbjct 487 TGCGCACCCCCACCTATGTGCAGCGCACCAACCCGTTCCTGGACACATCGCCCATGTGCG 546 Query 15359 CTCGCACAGTGCGGATGGAAACCGTTCAG-GCCGTCATCAAGGACGTTACCCAGTCGTAC 15417 | || || || ||||||||| | | | | ||||||||||| || |||| | ||| Sbjct 547 CCAAGACCGTTCGCATGGAAACC-TGCGGAACGGTCATCAAGGATGTCACCCGCGCCTAC 605 Query 15418 GGTGTGGATACCCGCATGGATTTGTGGCTTCCAGGTGATCCGCAGCCTGACAGGTGGGCG 15477 |||||||| ||||||||||| |||||| || ||||| ||||| || |||| |||||| Sbjct 606 GGTGTGGACACCCGCATGGACCTGTGGCGCCCGGGTGACCCGCAACCGGACAAGTGGGCC 665 Query 15478 AACCTGGACCAGCCTACCTACGTGTTTTCCACAGTGGACCGGTCGCAGATCACTGGTCCG 15537 ||||| || ||| ||||||||||||||||| |||||| ||||||| | || || Sbjct 666 AACCTCGATTCGCCCACCTACGTGTTTTCCACCCGGGACCGCCAGCAGATCTCGGGGCCC 725 Query 15538 ACGAAAACCGTGCTCGATTCGGTGCTGCGCACCACGATTGACCTTGGCGGGTCGCTGGGG 15597 || |||||||| |||||||||| | || ||| ||||| ||||| || || || Sbjct 726 ACCAAAACCGTTGCCGATTCGGTGATCAAGACGGTGATCGACCTCGGCGGATCACTCGGT 785 Query 15598 GACATCTTCAAACCTGTCATCAAGCAGGTTCCCGGCATGGACGGCGTGTTCTATGCGCCC 15657 ||||||||||| || |||||| ||||||| ||||| ||| |||| |||||||| || ||| Sbjct 786 GACATCTTCAAGCCAGTCATCCAGCAGGTACCCGGTATGAACGGGGTGTTCTACGCCCCC 845 Query 15658 GCGTTGGGTGTGGATTTCGAGCAGCCATACGCCTATTTCGTGGCCCCCGAGCCGGGTGAG 15717 | | ||||| |||||||||||||| |||||||| |||| |||||||| ||| ||| Sbjct 846 AAGCTCGGTGTCGATTTCGAGCAGCCCTACGCCTACGTCGTCGCCCCCGAAGAGGGCGAG 905 Query 15718 GACACCGGCATCGATGCGTGCACGATCACTGACCACACACCTGAGGGTTGGCAGCACATT 15777 ||| || |||| ||| ||| | |||||||| || ||||| ||||| ||||| Sbjct 906 GACTCCAACATCATCAACTGCGAAATCGCCGACCACACCCCCGAGGGCTGGCAACACATC 965 Query 15778 ATTGGTGGCCGTAGCCCAAAGTGGTTGAACGACTTGATGAATGCCACCTTCGCATGGCTA 15837 || || |||||| |||||||||||||||||||| |||||||||||||||||| || Sbjct 966 ATCGGCGGCCGTTCTCCAAAGTGGTTGAACGACTTAATGAATGCCACCTTCGCAGGGTGG 1025 Query 15838 ATCGACTCGCTGATGATCGTTGTTGGATTCACCGGCATACCGTCCGATCTGCTGTCGGGG 15897 || | |||||||||||||| || || ||| ||||||| ||||| |||||||| ||||| Sbjct 1026 ATGTATTCGCTGATGATCGTGGTCGGGTTCTCCGGCATCCCGTCGGATCTGCTCTCGGGA 1085 Query 15898 TTCCTGAACAACAGCTTCCTGGCGTTCCAGTTGATTCAGCATTACGACCGCCGTGACGCA 15957 |||||||||||||||||||||||||||||| || | ||| ||| | ||| |||| Sbjct 1086 TTCCTGAACAACAGCTTCCTGGCGTTCCAGATGGTCCAGGTGTACCAGGTCCGCGACGAG 1145 Query 15958 GTTGGCCCGTACCATCCGGCGATCGAGCGGTTCTATCCGACAGCATCAGCG--CCGTACA 16015 || ||||| | ||||||||||||||||||||||| ||||| || ||||| ||||||| Sbjct 1146 GTGGGCCCTTTTCATCCGGCGATCGAGCGGTTCTACCCGACCGC--CAGCGCCCCGTACA 1203 Query 16016 ACATCGAAACGGTGTTCGCATTCATCAACGCCTTGTTTGATTCGCAGGGCAAGACGACGG 16075 |||||||||| ||||||| ||||||||||| | || ||| | || || || |||| Sbjct 1204 ACATCGAAACCATGTTCGCGTTCATCAACGCGATTTTCGATGCCCAAGGTGCTACCACGG 1263 Query 16076 CGACGGTGCAGTTCCGCAACGGTGCCCAGTATGCGTTGGGTCGGGACGTTTT 16127 || ||| ||||||||||||| ||| ||||| || || || ||| |||| Sbjct 1264 CGCAGGTCACTTTCCGCAACGGTGACCAATATGCCTTAGGCCGAGACATTTT 1315 >seq50663 Length=1982 Score = 497 bits (550), Expect = 4e-136 Identities = 477/609 (78%), Gaps = 2/609 (0%) Strand=Plus/Plus Query 15616 ATCAAGCAGGTTCCCGGCATGGACGGCGTGTTCTATGCGCCCGCGTTGGGTGTGGATTTC 15675 || ||||| | |||||||||||||| ||||| || ||||| | |||||| | ||| Sbjct 1330 ATGAAGCAAGACCCCGGCATGGACGGGGTGTTTTACGCGCCGCTACTCGGTGTGAACTTC 1389 Query 15676 GAGCAGCCATACGCCTATTTCGTGGCCCCCGAGCCGGGTGAGGACACCGGCATCGATGCG 15735 ||||| || ||||||||| | || || || || | ||||||||| | |||| || Sbjct 1390 GAGCAACCCTACGCCTATCTTGTTGCGCCAGAATCCGGTGAGGACTCATCCATCACCTCG 1449 Query 15736 TGCACGATCACTGACCACACACCTGAGGGTTGGCAGCACATTATTGGTGGCCGTAGCCCA 15795 ||| |||||| |||| || || ||||||||||||||||| || |||||||||||||| Sbjct 1450 TGCCGGATCACCAACCATACCCCCGAGGGTTGGCAGCACATCATCGGTGGCCGTAGCCCT 1509 Query 15796 AAGTGGTTGAACGACTTGATGAATGCCACCTTCGCATGGCTAATCGACTCGCTGATGATC 15855 ||||||||||||||||||||||||||||| ||||| ||| | ||||| |||||||||||| Sbjct 1510 AAGTGGTTGAACGACTTGATGAATGCCACGTTCGCGTGGTTGATCGATTCGCTGATGATC 1569 Query 15856 GTTGTTGGATTCACCGGCATACCGTCCGATCTGCTGTCGGGGTTCCTGAACAACAGCTTC 15915 || || || ||| |||| || || || || ||||| || || |||||||||||||||||| Sbjct 1570 GTGGTCGGGTTCTCCGGTATCCCATCAGACCTGCTATCCGGCTTCCTGAACAACAGCTTC 1629 Query 15916 CTGGCGTTCCAGTTGATTCAGCATTACGACCGCCGTGACGCAGTTGGCCCGTACCATCCG 15975 ||||| |||||| | | ||||| |||||||| || |||| ||| ||||| ||||| || Sbjct 1630 CTGGCCTTCCAGCTCCTGCAGCACTACGACCGACGCGACGAAGTCGGCCCCTACCACCCA 1689 Query 15976 GCGATCGAGCGGTTCTATCCGACAGCATCAGCGCCGTACAACATCGAAACGGTGTTCGCA 16035 ||| ||||||| |||||||| || |||||||| || |||||||||||||| || ||||| Sbjct 1690 GCGGTCGAGCGCTTCTATCCCACCGCATCAGCCCCCTACAACATCGAAACAGTATTCGCG 1749 Query 16036 TTCATCAACGCCTTGTTTGATTCGCAGGGCAAGACGACGGCGACGGTGCAGTTCCGCAAC 16095 |||||||||||| | |||||||| |||||| | || || || || ||||||||| Sbjct 1750 TTCATCAACGCCCTCTTTGATTCACAGGGCTACACCACCGCACAAGTCACGTTCCGCAAT 1809 Query 16096 GGTGCCCAGTATGCGTTGGGTCGGGACGTTTTTCGCGGCGGCCTGATGTCGCTGGTGT-T 16154 |||| ||| || || ||||| | |||||||| ||||| |||||||| | || | Sbjct 1810 GGTGACCAATACGCCTTGGGAAGAGACGTTTTCAAGGGCGGATTGATGTCGGTCGTCTAC 1869 Query 16155 CATGTCACGTACCCGAATGGTGACTGACTACATCGAAAACGTCATGTGGCGGGTTTCCCA 16214 || | | || ||| ||||| || ||||||||||| |||||||||||||| | | | Sbjct 1870 CACGGC-CGAACCAAGATGGTCACCGACTACATCGAGAACGTCATGTGGCGCATCACTCC 1928 Query 16215 GGATGAGCG 16223 |||||||| Sbjct 1929 AGATGAGCG 1937 Score = 168 bits (186), Expect = 2e-37 Identities = 204/275 (74%), Gaps = 2/275 (1%) Strand=Plus/Plus Query 15172 CAGTCCGGGTGGCTGGAGTTCATCAACAACGGCCTGTCGTTAAACCCGGATATCCGGGCA 15231 ||||| |||||| |||| ||| |||||||| || ||||| ||||| || ||||| ||| Sbjct 894 CAGTCGGGGTGGATGGAAGCCATTAACAACGGGCTCTCGTTGAACCCCGACATCCGTGCA 953 Query 15232 TGGTTCGGCACCGTGTTGCAAGCCCTGTCGCGGGACGGGCTGTCGGTCCAGGCGTTCACC 15291 |||||||||||| | ||||||||||| || || || |||||| | || | ||| | Sbjct 954 TGGTTCGGCACCATCCTGCAAGCCCTGGACCGCGATGGCCTGTCGATTAAGACCTTCGCG 1013 Query 15292 CGCATGCTGCGAACCCCGGTGTATGTGTCACGCACCAATCCACTGCTGGACACGTCGCCG 15351 |||||||| || || || |||||| || ||||| || | |||||||| || ||| Sbjct 1014 CGCATGCTACGCACGCCAACGTATGTCAAGCGAACCAACCCGTTCCTGGACACATCCCCG 1073 Query 15352 ATG-GTGGCTCGCACAGTGCGGATGGAAACCGTTCAGGCCGTCATCAAGGACGTTACCCA 15410 || ||| | | || || || ||||| |||||| | || |||||||| || || | Sbjct 1074 TTGTGTGCCAAG-ACCGTCCGCATGGAGACCGTTGGCTCGGTAATCAAGGATGTCACGCG 1132 Query 15411 GTCGTACGGTGTGGATACCCGCATGGATTTGTGGC 15445 | |||||||| |||||||| |||||| |||||| Sbjct 1133 AGCCTACGGTGTAGATACCCGTATGGATCTGTGGC 1167 Score = 136 bits (150), Expect = 1e-27 Identities = 233/338 (69%), Gaps = 0/338 (0%) Strand=Plus/Plus Query 14770 TGCGACAAGTTTTGGCAGCCGATGGGCGCGGTTGGTGGCGACCTGATCGAGGCGTCGGGT 14829 |||| |||||| ||| || ||||| | || ||| || || ||||||||||| Sbjct 479 TGCGGCAAGTTCTGGACACCCATGGGGTTAATCGGCAACGAACTCATGGAGGCGTCGGGG 538 Query 14830 GCTGACCCGCGCAACGATGTTGAAACCGGCCGGATCGTCCTCAAAGGGAACAGCCCTCTC 14889 | || || || || || |||| ||||||| | ||| || | ||||||||| Sbjct 539 ACCGATCCCCGTAATGACTGCCCTACCGCCCGGATCAAGCACAAGGGTGATAGCCCTCTC 598 Query 14890 ATCCCTTTGTTCATGGACTGCAAAAAGACGATGGTCGGTGTCATCGTCGAGACAGCCGGT 14949 | | |||||||||||||| || |||||||| || | || ||||| || || Sbjct 599 GTGCAGATGTTCATGGACTGCCGGAACACGATGGTGGGCATTGAGGTAGAGACCGCGGGG 658 Query 14950 TTGCGGTATGCGTTCTACACGAAGAACCACACCTACGAGTACCGCGACAGCGCATGGACC 15009 ||||| | |||||| || || ||| || ||||||| ||| |||| ||||| Sbjct 659 CTGCGGCAGAACTTCTACGTCAAAAAGCACGACTGGGAGTACCAAGACGGCGCTTGGACG 718 Query 15010 GGCACCGCTGAACTGCGCGGTATCCGCGACATCCTCAATTACTACGTGATTTGGCCGTCG 15069 || || | ||| || |||||| | ||||| ||||| || |||||||| |||||||| Sbjct 719 GGAACTGTTGAGGCCCGGGGTATCTGGGACATACTCAACTATTACGTGATATGGCCGTCA 778 Query 15070 TGGTGGCTGCCGATTCAGGCACAGCCGTTCTCGCACGC 15107 |||||||| || ||||| | |||||| || ||||| Sbjct 779 TGGTGGCTACCCCCACAGGCCCCGCCGTTTTCTCACGC 816 >seq38559 Length=768 Score = 304 bits (336), Expect = 4e-78 Identities = 291/370 (79%), Gaps = 2/370 (1%) Strand=Plus/Plus Query 15837 AATCGACTCGCTGATGATCGTTGTTGGATTCACCGGCATACCGTCCGATCTGCTGTCGGG 15896 |||||| ||||||||||||| || || ||| |||| || || || || ||||| || || Sbjct 388 AATCGATGCGCTGATGATCGTGGTCGGGTTCTCCGGTATCCCATCAGACCTGCTATCCGG 447 Query 15897 GTTCCTGAACAACAGCTTCCTGGCGTTCCAGTTGATTCAGCATTACGACCGCCGTGACGC 15956 ||||||||||||||||||||||| |||||| | || ||||| |||||||| || |||| Sbjct 448 CTTCCTGAACAACAGCTTCCTGGCCTTCCAGCTCATGCAGCACTACGACCGACGCGACGA 507 Query 15957 AGTTGGCCCGTACCATCCGGCGATCGAGCGGTTCTATCCGACAGCATCAGCGCCGTACAA 16016 ||| ||||| ||||| || ||| ||||||| |||||||| || |||||||| || ||||| Sbjct 508 AGTCGGCCCCTACCACCCAGCGGTCGAGCGCTTCTATCCCACCGCATCAGCCCCCTACAA 567 Query 16017 CATCGAAACGGTGTTCGCATTCATCAACGCCTTGTTTGATTCGCAGGGCAAGACGACGGC 16076 ||||||||| || ||||| |||||||||||| | |||||||| |||||| | || || || Sbjct 568 CATCGAAACAGTATTCGCGTTCATCAACGCCCTCTTTGATTCACAGGGCTACACCACCGC 627 Query 16077 GACGGTGCAGTTCCGCAACGGTGCCCAGTATGCGTTGGGTCGGGACGTTTTTCGCGGCGG 16136 || ||||||||| |||| ||| || || ||||| | |||||||| ||||| Sbjct 628 ACAAGTCACGTTCCGCAATGGTGACCAATACGCCTTGGGAAGAGACGTTTTCAAGGGCGG 687 Query 16137 CCTGATGTCGCTGGTGT-TCATGTCACGTACCCGAATGGTGACTGACTACATCGAAAACG 16195 |||||||| | || | || | | || ||| ||||| || |||||| |||| |||| Sbjct 688 ATTGATGTCGGTCGTCTACCACGGC-CGAACCAAGATGGTCACCGACTACCTCGAGAACG 746 Query 16196 TCATGTGGCG 16205 |||||||||| Sbjct 747 TCATGTGGCG 756 Score = 152 bits (168), Expect = 2e-32 Identities = 213/299 (71%), Gaps = 0/299 (0%) Strand=Plus/Plus Query 15448 CCAGGTGATCCGCAGCCTGACAGGTGGGCGAACCTGGACCAGCCTACCTACGTGTTTTCC 15507 || |||||| |||||| || |||| | ||| || || || || || || ||||| Sbjct 1 CCCGGTGATGAGCAGCCCGATCAGTGGATCACCCTCGATCAACCCACATATGTCTTTTCG 60 Query 15508 ACAGTGGACCGGTCGCAGATCACTGGTCCGACGAAAACCGTGCTCGATTCGGTGCTGCGC 15567 || || ||||| || ||| || || || ||||| || || |||||||| |||| Sbjct 61 ACTGTCGACCGCAGCCAAATCGAAGGCCCCACAAAAACTGTCCTTGATTCGGTCTTGCGG 120 Query 15568 ACCACGATTGACCTTGGCGGGTCGCTGGGGGACATCTTCAAACCTGTCATCAAGCAGGTT 15627 || | ||||| || || ||||| || | |||||||| || ||||| ||||| || Sbjct 121 ACGGTAGTGGACCTGGGTGGATCGCTCGGCGGGATCTTCAAGCCGGTCATGAAGCAAGTC 180 Query 15628 CCCGGCATGGACGGCGTGTTCTATGCGCCCGCGTTGGGTGTGGATTTCGAGCAGCCATAC 15687 |||||||||||||| |||||||| ||||| | |||||| | |||||||| || ||| Sbjct 181 CCCGGCATGGACGGGGTGTTCTACGCGCCGCTACTCGGTGTGAACTTCGAGCAACCCTAC 240 Query 15688 GCCTATTTCGTGGCCCCCGAGCCGGGTGAGGACACCGGCATCGATGCGTGCACGATCAC 15746 |||||| | || || || || | ||||||||| | |||| ||||| |||||| Sbjct 241 GCCTATCTTGTTGCGCCAGAATCCGGTGAGGACTCATCCATCACCTCGTGCCGGATCAC 299 >seq45035 Length=256 Score = 107 bits (118), Expect = 7e-19 Identities = 119/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 14164 TATGACGGTCCCGGCGCGGATGAGTATGTGGAGTTTGGTCCGCTGCTGCCCAATCAGATT 14223 || ||||| |||||| |||| | ||||| || || || |||||||| ||||||||| | Sbjct 59 TACGACGGGCCCGGCTCGGACCAATATGTCGAATTCGGGCCGCTGCTACCCAATCAGGTG 118 Query 14224 GTGTTCCTACGTACCGACCCGCGCTCACAGACGACGTTGGTGCAGGATTTGACGTCGGTG 14283 ||||| | || ||||| |||||| || || || |||||| | || | || |||||| Sbjct 119 GTGTTTTTGCGCACCGATCCGCGCGTGCACACCACCTTGGTGAAAGACCTAACCTCGGTG 178 Query 14284 CCGCCGTCGCCGCAGGAGTTGAACATTTTCCAGCAGGCG 14322 ||||| || |||||||| | | | |||||| ||||| Sbjct 179 CCGCCCTCACCGCAGGAACTCGATTTGTTCCAGGAGGCG 217 >seq43497 Length=1050 Score = 91.5 bits (100), Expect = 5e-14 Identities = 174/254 (69%), Gaps = 18/254 (7%) Strand=Plus/Plus Query 17199 GTTTTCGGTTGAGGTTTTGCCGCTGTCATGACGTCATCGTTTGATCCGTTGCCGGAGTGG 17258 ||||| || ||||||| ||||||||| | ||||| | | || || ||| Sbjct 3 GTTTTGGGCTGAGGTTCTGCCGCTGTGA------CATCGGG------GATTCCCGAATGG 50 Query 17259 GCTCATGCGGTGCCGTCTGAGCCGGGTATTCACCCGGAGCAGTCGGCGTTGCAGTGGCAG 17318 || || ||| | ||||||| || | | || | ||||||| | | || || || Sbjct 51 GCGCAGGCGATCCCGTCTGCCCCAG---TCCATCAGGAGCAGCC--CAATGAGCTGACA- 104 Query 17319 CGTCCGTTCACTGTTCAGCAGCTGCTTGAGATTGGTGAGCAGTTCATCGAGCAGTTTTTG 17378 || |||||||| | |||||||| ||||| | ||||| ||| ||||||||||||| || Sbjct 105 CGGCCGTTCACGGCGCAGCAGCTCATTGAGTTCGGTGAACAGCTCATCGAGCAGTTCCTG 164 Query 17379 GCGTGGGTGGTGCGCGCGGTTGTCGGCGTATTCGTTCCGGGTGAGGGTTCGTTCGATCAG 17438 | | || || | || || |||||| |||| | || ||||| || |||||||| ||| Sbjct 165 CGGCGCGTAGTCCTGGCCGTGGTCGGCTCATTCATCCCCGGTGAAGGCTCGTTCGAGCAG 224 Query 17439 TTGCGTGATTGGGC 17452 || || ||||| Sbjct 225 CTGGAGGAATGGGC 238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 171410236257000