Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq53 848 0.0 seq48864 307 1e-78 seq805 147 3e-30 seq75 138 2e-27 seq199 127 3e-24 seq79 114 2e-20 seq44217 86.0 9e-12 >seq53 Length=2810707 Score = 848 bits (940), Expect = 0.0 Identities = 1554/2256 (69%), Gaps = 54/2256 (2%) Strand=Plus/Minus Query 68359 TTATCCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTAC 68418 || ||||||| | |||||| | || || | ||| ||| |||| | || ||| ||| Sbjct 1303578 TTTTCCTTATTTAGAGTAAACAGGATTGGATTAGCTGCTGGTCTTGTCCTTAAATAATAC 1303519 Query 68419 ATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAA 68478 || || || |||| | | |||| || ||||| |||||||| || |||||| ||| Sbjct 1303518 ATCCCAGTCTTCAAATTCTGCTTCCAGCCATAGAAGTGCATACTGGTGAGTTTGCCATAG 1303459 Query 68479 CTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCT 68538 | || || || ||||| ||||||| || ||||||||||| ||||||| |||| | Sbjct 1303458 TTAGGTTCAGCAATATGGATATTCAAAGACTGACTTTGATCAATGAAAGTATCTCTCTTG 1303399 Query 68539 GCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTG 68598 || ||||| || | || | | || || | |||||||| ||||||||| ||| | || Sbjct 1303398 GCTGCCATCTTGAGAACAGTTTTCTGGGAGATTTCCCACATAGTCTTATAAAGTTCCTTC 1303339 Query 68599 ATATCATCTGGAAGG-CTCGTATTTTGAATGGATCCA-CCATCGGATATAATTAT---AT 68653 | ||||| | || || |||| | ||||| | |||| | || ||| || || Sbjct 1303338 AGGTCATCAGTAATTTCTGGTATGCTC--TGGATAGAGCCATTGCATGCAATAATCTGAT 1303281 Query 68654 TCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAA 68713 | || ||||| ||||||||||| | ||| || | | || | || | || ||||| | Sbjct 1303280 TTTTCATCTCTTCATTCCACAAGCCCCACTCAGTAAGATCTTTCAGTAAGTGAGGATTTA 1303221 Query 68714 CTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCA 68773 | || |||||||| || || || ||||| ||||||| || || |||||||| ||||| | Sbjct 1303220 CAATCTGAAATTCTCCTGACAAGACTCTGTGAGTGTAGATGTTGCTGGTATAAGGTTCAA 1303161 Query 68774 CAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATA 68833 || |||||||| |||| || |||||||||| ||||| | ||| || || | | || Sbjct 1303160 TGGACTCATTATTCCCCAAGATCTGAGCAGTTGCAGCAGTAGTCATTGGGGCAATAAGTA 1303101 Query 68834 AACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGAT 68893 |||| ||||| | ||||| || || || || || ||| ||||||| ||||| || | Sbjct 1303100 AACTGTTTCTTACACCATACTTTGCAATCTTGTCCTTGAGAAGTTTCCAGTCCCACAGGT 1303041 Query 68894 CAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCAT 68953 | | || ||||||||| | ||| || || |||||| | || ||| | || || | Sbjct 1303040 CTGTGGGAGTAACATTCCACACATCATACTGAAGAATTTCTTTGCTTACTGGAGAGCCCT 1302981 Query 68954 TATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGT 69013 ||| ||||| || || || | || || || || ||||| || || || || || || | Sbjct 1302980 CATAGGTTTCCTATGGACCATACTCTTTGGCCAGGTCACAGCTGGCTTCCAAGGCTCCAT 1302921 Query 69014 AATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGAT 69073 ||||||| |||| || || | |||||| || || | ||| |||| || ||||||| Sbjct 1302920 AATAAATAGTTTGAAAGATTTGCTTATTCAGTAACTGGACCTCTGGACTTTCAAATGGAT 1302861 Query 69074 AATGTAA--AAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATG 69131 | | | | |||| |||| ||||| |||| | ||||||||||| || || || ||| Sbjct 1302860 A-TCTCATCAAGA-TAAAAGCATCAGCCAGAACTTGAACCCCAATTCCAATGGGGTGATG 1302803 Query 69132 TCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT 69191 | |||||||| | || ||||||||||| || || || ||| ||||||||||| Sbjct 1302802 GCGTTTATTTGATACGTATGCCTCTGGAATAGGGTAGTAGTTTCTATTAATAATTTTATT 1302743 Query 69192 AAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATC---GTCC 69248 | ||||| || | |||| | || || || || ||| || | || | Sbjct 1302742 CAAGTTTCGAACAATGACTTCAGTGACTTCAGCCAGCTTCTTAAAGTCGTACGTGTGTTC 1302683 Query 69249 ATCTATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGA 69308 | | ||| |||||||||| || | || || | ||||||||||| ||||| | Sbjct 1302682 TGATGTGACATACATATTCAGGGCCAGGGAAGCCAAGTTACAAACTGCAACCTCCTC--- 1302626 Query 69309 ATTTGC----ATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGAT 69364 ||||| ||| | || ||| ||||| || || || || |||||||| | ||||| | Sbjct 1302625 -TTTGCTGGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATTGCTCCCAGGT 1302567 Query 69365 TTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTT 69424 | ||||| || ||||| | ||||||| | ||||| || || | || || |||| | Sbjct 1302566 TCTGCTGGTTGCTCTTATGATTACAGGAATTTTTGTAGAGCATGTAGGG-GTGTCAGTCT 1302508 Query 69425 CAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCT---TGT 69481 | ||||||| || ||||||| | ||||| | ||| || | || | | ||| Sbjct 1302507 CTGTCTGAGACTCAATAATAGCATACCAAAGCTGCTGAGCTTTCACAACTTTGTGAATGT 1302448 Query 69482 AACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCAT 69541 || || || | ||||| | | ||||||| || ||||| ||||||||||| |||| Sbjct 1302447 GACCCTGCT---TCTCATACTTTTCATATAGCTTCTCAAATTCTTCTCCCCAAACTTCAT 1302391 Query 69542 CCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTT 69601 ||| |||||||| ||||||||||||||||| ||||| | | || | | || | || Sbjct 1302390 CCAGGCCAGGACACTCATTTGGACACATCAAAGACCAGTCCTGATTAGTTTCCACCCATT 1302331 Query 69602 TCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCAT 69661 |||| || ||||| | ||||||||| || | || ||||| || | | |||||| | Sbjct 1302330 TCATGAAGAGATCTGAAATCCAAAGGGCAAAGAAAAGATCCCTCGCATGCTGTTCTTCCT 1302271 Query 69662 TTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGAT 69721 ||||||| || || || | |||||||||||| | || || ||||| | |||| || | Sbjct 1302270 TTCCTGTGTTCTTCTTTAAATCGAGAAACTCAAAGATGTCTAAATGCTAAGGTTTCAGGT 1302211 Query 69722 ATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTAT 69781 | || || | | || | || || ||||| || ||||||| ||||| || || ||| Sbjct 1302210 AAATAGCAAATGCCCCAAGACGCTTGTTTCCACCTTGATCTACGTATCGAGCTGTATTAC 1302151 Query 69782 TATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAAC 69841 | || ||||||||||| || | || ||||| || || ||||| || |||| || || | Sbjct 1302150 TGTATACTCTCAGCATTGGTACAAGGCCATTGGAATTGCCATTAGTCCCAGCAAGGTAGC 1302091 Query 69842 TTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTA 69901 | || | || |||||| ||| | || | ||| ||||| || || ||||| || | Sbjct 1302090 TGCCAGTAGCCCGAATACAACTCACAGCAACACCAATTCCCCCAGCAGACTTAGAAATCA 1302031 Query 69902 GAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAA 69961 |||||| | || | || ||||| || || || ||||| |||||| ||||||| |||| Sbjct 1302030 AAGCACACTGCTTTAGAGTATCATAAATCCCTTCAATGCTGTCATCTTTCATGTTCAGAA 1301971 Query 69962 GAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGT 70021 | ||| || |||| | || | | | || || ||||| || | || ||||| || | Sbjct 1301970 GGAAATAGGTAGAAAGTTCTGGGCGATTGGTGCCAGCATTGAAGAGAGTGGGAGAGGCAT 1301911 Query 70022 GAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACT 70081 |||||||||| || |||||||| || || ||||||||||| || | || || || | Sbjct 1301910 GAGTGAACCACTTCTCAGAAAGAAGGTTATATGTTTCAATTGCAGCATCAATGTCTTCTT 1301851 Query 70082 GATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTAT 70141 ||||| || | | || | ||||||||| || || |||| || || ||| | Sbjct 1301850 TGTGAATCCCCACAGATACCCTCATCAACATGTGTTGCGGTCTGTCAGCCACTTTCCCAC 1301791 Query 70142 TTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGT 70201 | || ||||||| || || | |||| | ||||| |||||||| ||||| ||||| | Sbjct 1301790 TAATCTTCAACAAATAGGACTGCTCCAATGCCTTAAAGCCAAAATAATTGTAAGAAAAAT 1301731 Query 70202 CTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGG---TAACTATATCCA 70258 ||| || || || || |||||||||| ||| ||| |||| ||| || |||| Sbjct 1301730 CTCGATCATAGATGATGGCAGAATTTAGGCAATCTTTA---TTGGCCAAAACAATGTCCA 1301674 Query 70259 ----TAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTG 70314 | || | | | | || | ||| |||| ||||| | ||||| | |||||| Sbjct 1301673 GTGTTGAC--TTG--GCCACCATGGAAGAGTGTTTGCCATTATGTGGATTTATGTAGTTG 1301618 Query 70315 AATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATG 70374 | | |||||||| ||||||||||| | ||| |||||||| ||||| || || |||| Sbjct 1301617 TAAAGGTCTTCCATCACATCACTAAACATTTTCTTTGTTTCTTTGTGCAAGTTAGATACA 1301558 Query 70375 GCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATT 70434 || || || ||||| ||||| ||||||||||| || | ||||| | || || ||| || Sbjct 1301557 GCAATCCTTGCTGCCAGAATGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTT 1301498 Query 70435 TCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACT 70494 || ||||| || ||||||| ||| | | || || || |||| | ||||| || ||| Sbjct 1301497 TCAGCAGCCAAAGTATCTAGTTCAACCATGGTGACCCCACTATACAAGCCTTGGATTACT 1301438 Query 70495 TTCATGGCTATTTTGATAGGATCTATGAATTCTGTGTTCAGACCATAACATAATTTTCT- 70553 ||||| | || |||| | | || || | || || |||||||| || |||| Sbjct 1301437 TTCATCG-TA-------AGGA-CCAAAAAGTCCATATTGAGTCCATAACA-AAGCTTCTG 1301388 Query 70554 AATACGAGATGTAATTTTATCAAACATAACATTCTC 70589 | | |||||||||||| | ||||| || | ||| Sbjct 1301387 GTTTCTAGATGTAATTTTGTAGAACATGACTTGCTC 1301352 >seq48864 Length=438413 Score = 307 bits (340), Expect = 1e-78 Identities = 551/800 (69%), Gaps = 11/800 (1%) Strand=Plus/Plus Query 39273 AAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTTTTT 39329 |||||||| ||||||| | |||| ||| || | | ||||||||||||||| | | Sbjct 419683 AAAAGTCAGCATCTAAGGTAAAAGAATTCTCGGTTGGACTTGACATAACTCCCATCCTCT 419742 Query 39330 GGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCA 39389 | || ||||| || | ||||| || || ||||| || ||||||| | | ||||| |||| Sbjct 419743 GATACTCACCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTAAAATATTCTCCA 419802 Query 39390 TGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCAATC 39449 | || ||||| ||||| | | | | | ||||||| | ||| || | || Sbjct 419803 TAAAGTCAAATGGATTTCCTACTCTGAAAACCTCGCTAAATCCCAGTTCCAGCATAAGTC 419862 Query 39450 TATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTAA 39509 ||| |||||||| || ||||| ||||||| | || ||||| | ||||| || | Sbjct 419863 TATTGGCAACAAACTCAATGTACTGCTTCATCAAG-CGCAGTTCATCTCAATGAGCTTCA 419921 Query 39510 CTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGA-TGTCTACGGCCTCTGTTATTATCGAT 39568 | || | |||||| || || ||||| | ||| | | | || || | | || || | Sbjct 419922 CAGGCAAAGCCTCTGTGAGGAACTCCTGTTCCACTCTTGACAGCATTGATAATGATTTCT 419981 Query 39569 GTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAGTCA 39628 | ||| || || ||| || | | |||| ||||| | | |||| | | | Sbjct 419982 TTCACTCTCTGCTCTAACGGATAGTGTAGCAGGCGTTTGAACATCAGGTAGGCAACATTA 420041 Query 39629 CAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGA 39688 || |||| | ||||||||| ||||| | ||| || ||||||||||| |||||||| || Sbjct 420042 CAGTGTAAACTCTCATCTCTGCTAATCAGTTCATTGGAAAATGTGAGACCAGGCATCAGT 420101 Query 39689 CCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACT 39748 | || | |||||||| ||||| ||||| || |||| ||||||||| ||||||||| Sbjct 420102 CTTCGTTCCTTGAGCCAGAATATCTATGCAAACGAGCCAGTAAAGAAGATTCCTTCTACT 420161 Query 39749 GCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT-----ATCCACTTCT 39803 |||||||| || ||| | ||||| || | | || || ||| ||||| | Sbjct 420162 GCTGCAAAAGCTACACAACGTTCTCCATAGGTAGCCTCCTT-TGTCCCCAATCCAACGCA 420220 Query 39804 GTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAAT 39863 |||||||| || | |||||| ||||||||||| ||||| || ||| | |||||| | | Sbjct 420221 AGGCCCAATCTGCCTCCTTCTTGACACAAGGCATGGTTTCAATGGCACTGAAGAGAAATT 420280 Query 39864 GTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGA 39923 |||| | |||||||| || || || || | | |||||||||||| ||| | | Sbjct 420281 CCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAAACTATACATTTCAGAAGGTA 420340 Query 39924 TGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTG 39983 ||||||| || || || || || || || ||||| | ||||| ||||| | || ||| Sbjct 420341 TGTTTTCCATGGCAATTTGGAAGCCATACAAACAGCGGGCTTCTGTAATGTCAACTTCTT 420400 Query 39984 AACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCA 40043 | ||||| ||| ||| |||||||| || || ||||||| || |||| || |||| Sbjct 420401 GGCTAAATCGCTCCACCAGGTTTTCATTTACGATGCCATCACATGCTACAAAGAAAGCCA 420460 Query 40044 ATACATGTTTAATAAAATAT 40063 ||||| || |||||| Sbjct 420461 GAACATGGGATATGAAATAT 420480 Score = 304 bits (336), Expect = 2e-77 Identities = 550/800 (69%), Gaps = 11/800 (1%) Strand=Plus/Plus Query 39273 AAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTTTTT 39329 |||||||| ||||||| | |||| ||| || | | ||||||||||||||| | | Sbjct 414760 AAAAGTCAGCATCTAAGGTAAAAGAATTCTCGGTTGGACTTGACATAACTCCCATCCTCT 414819 Query 39330 GGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCA 39389 | || ||||| || | ||||| || || ||||| || ||||||| | | ||||| |||| Sbjct 414820 GATACTCACCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTAAAATATTCTCCA 414879 Query 39390 TGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCAATC 39449 | || ||||| ||||| | | | | | ||||||| | ||| || | || Sbjct 414880 TAAAGTCAAATGGATTTCCTACTCTGAAAACCTCGCTAAATCCCAGTTCCAGCATAAGTC 414939 Query 39450 TATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTAA 39509 ||| |||||||| || ||||| ||||||| | || ||||| | ||||| || | Sbjct 414940 TATTGGCAACAAACTCAATGTACTGCTTCATCAAG-CGCAGTTCATCTCAATGAGCTTCA 414998 Query 39510 CTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGA-TGTCTACGGCCTCTGTTATTATCGAT 39568 | || | |||||| || || ||||| | ||| | | | || || | | || || | Sbjct 414999 CAGGCAAAGCCTCTGTGAGGAACTCCTGTTCCACTCTTGACAGCATTGATAATGATTTCT 415058 Query 39569 GTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAGTCA 39628 | ||| || || ||| || | | |||| ||||| | | |||| | | | Sbjct 415059 TTCACTCTCTGCTCTAACGGATAGTGTAGCAGGCGTTTGAACATCAGGTAGGCAACATTA 415118 Query 39629 CAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGA 39688 || |||| | ||||||||| ||||| | ||| || ||||||||||| |||||||| || Sbjct 415119 CAGTGTAAACTCTCATCTCTGCTAATCAGTTCATTGGAAAATGTGAGACCAGGCATCAGT 415178 Query 39689 CCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACT 39748 | || | |||||||| ||||| ||||| || ||| ||||||||| ||||||||| Sbjct 415179 CTTCGTTCCTTGAGCCAGAATATCTATGCAAACGAGACAGTAAAGAAGATTCCTTCTACT 415238 Query 39749 GCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT-----ATCCACTTCT 39803 |||||||| || ||| | ||||| || | | || || ||| ||||| | Sbjct 415239 GCTGCAAAAGCTACACAACGTTCTCCATAGGTAGCCTCCTT-TGTCCCCAATCCAACGCA 415297 Query 39804 GTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAAT 39863 |||||||| || | |||||| ||||||||||| ||||| || ||| | |||||| | | Sbjct 415298 AGGCCCAATCTGCCTCCTTCTTGACACAAGGCATGGTTTCAATGGCACTGAAGAGAAATT 415357 Query 39864 GTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGA 39923 |||| | |||||||| || || || || | | |||||||||||| ||| | | Sbjct 415358 CCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAAACTATACATTTCAGAAGGTA 415417 Query 39924 TGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTG 39983 ||||||| || || || || || || || ||||| | ||||| ||||| | || ||| Sbjct 415418 TGTTTTCCATGGCAATTTGGAAGCCATACAAACAGCGGGCTTCTGTAATGTCAACTTCTT 415477 Query 39984 AACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCA 40043 | ||||| ||| ||| |||||||| || || ||||||| || |||| || |||| Sbjct 415478 GGCTAAATCGCTCCACCAGGTTTTCATTTACGATGCCATCACATGCTACAAAGAAAGCCA 415537 Query 40044 ATACATGTTTAATAAAATAT 40063 ||||| || |||||| Sbjct 415538 GAACATGGGATATGAAATAT 415557 >seq805 Length=2268304 Score = 147 bits (162), Expect = 3e-30 Identities = 481/733 (66%), Gaps = 36/733 (5%) Strand=Plus/Minus Query 68956 TATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAA 69015 || || ||||| || || | || || || || ||||| || || || | || || ||| Sbjct 1613369 TAGGTGTCATACGGGCCATACTCTTTGGCCAGGTCACAGCTGGCTTCCAGAGCTCCATAA 1613310 Query 69016 TAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAA 69075 ||| | ||||| || || | |||||| || | || ||| |||| || || |||| Sbjct 1613309 TAAGTGGTTTCAAAGATTTGCTTATTCAGTAACAGGGCCTCTGGACTCTCAAAATGATA- 1613251 Query 69076 TGTAA--AAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTC 69133 | | | |||| |||| ||||| |||| || ||||| || || || | || Sbjct 1613250 TCTCATCAAGA-TAAAAGCATCGGCCA------GA---CCAATTCCAATGGGGCGATAAT 1613201 Query 69134 TCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAA 69193 |||||||| || ||||||||||| || || | | ||| | ||||||||| | Sbjct 1613200 GTTTATTTGATAAGCATGCCTCTGGAATAGGGTAGTAGCTTACATCAACAATTTTATTCA 1613141 Query 69194 GATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAAT-CGTCCATC- 69251 |||||||| | |||||| || | ||||| ||| ||| || || | || Sbjct 1613140 AGTTTCGGACAATGACTTTAGTGACTTGGGCCAGTTTCTTAAAGTCATATGTGTGC-TCT 1613082 Query 69252 --TATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAA 69309 | | ||| ||| |||||| || | || || || ||||||||||| | || | Sbjct 1613081 GATGTGACATACACATTCAGGGCCATGGAAGCCAGGTTACAAACTGCAAGTTCTCT---G 1613025 Query 69310 TTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGC 69369 | | ||| | || ||| ||||| || || || ||||||| ||| | ||||| || ||| Sbjct 1613024 CTGGTATACTCTACTATTTCTGTGCACAGGTTGCTACATTCGATCATTCCCAGGTTCTGC 1612965 Query 69370 TGATTACTC------TTTTTG-TTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGT 69422 || || ||| |||||| |||| | || ||| || | | || |||||| | Sbjct 1612964 TGGTTGCTCTTCCTTTTTTTGATTAC-TGAATCTTTGAGGAGCAAGTAGGGGGTACCAAT 1612906 Query 69423 TTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTA 69482 ||| ||||||| || | ||||| | ||||| | ||| | || | | | Sbjct 1612905 CTCAGTCTGAGACTCAACAATAGCATACCAAAGCTGCTGAGCTTCCCCAAC--TTTGCAA 1612848 Query 69483 AC--GCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCA 69540 || | || || ||||| | |||||| | || ||||| |||| |||||| | Sbjct 1612847 ACATGACCCTGCTTCTCATACTTCTCATATAG-CTCTCAAATTCTTCTCTCCAAACTGGA 1612789 Query 69541 T--CCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTC 69598 | ||| ||||||| ||||||||||||||||| ||||| | | || | | |||| Sbjct 1612788 TGACCAGGTCAGGACACTCATTTGGACACATCAAAGACCAGTCCTGATTAGTTTCCACTC 1612729 Query 69599 GTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTT 69658 ||||||| || ||||| |||||||||||| | | | ||||| |||| | | |||| Sbjct 1612728 GTTTCATGAAGAGATCTGGAATCCAAAGACCAAAGGAAAGATCCCTGGCACGCTGCTCTT 1612669 Query 69659 CATTTCCTGTAtt 69671 | |||||||| || Sbjct 1612668 CCTTTCCTGTGTT 1612656 Score = 109 bits (120), Expect = 8e-19 Identities = 197/285 (69%), Gaps = 10/285 (4%) Strand=Plus/Minus Query 69781 TTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAA 69840 ||| | |||||||||||||| | || |||| | || ||||| || |||| || ||| Sbjct 1611085 TTACATACTCTCAGCATCGGTACAAGGCCATCGGCATTGCCATTAGTCCCAGCAACATAG 1611026 Query 69841 CTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATT 69900 || || || || | |||| ||| | || | ||| | | | || || |||||| || Sbjct 1611025 CTGCCACTAGCTCAAATACAACTCACAGCAACACCAACTTCCCCAGCAGATTTAGAAATC 1610966 Query 69901 AGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGA 69960 | ||||| | || | |||||||| || || | |||| || ||| ||||| | ||| Sbjct 1610965 AATGCACATTGCTTGAGAGTGTCATAAATGCCTTTGGTGCTGTCGTCTTTCATGCTCAGA 1610906 Query 69961 AGAAAACAGCTAGACATTTGATGATGTA-TAGTTCCCGCATTAAATAATGTAGGAGATGC 70019 || ||||||||||| | ||| ||| | | || || ||||| | | |||| || Sbjct 1610905 AGTAAACAGCTAGAAAGTTG-TGAGCCATTGGTGCCAGCATTGA-----GAGTGAGAGGC 1610852 Query 70020 GTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGC 70064 ||||||||||| || ||||| || |||||| ||||||| || Sbjct 1610851 ATGAGTGAACCACTTCTCAGA---GAGGTTGTATATTTCAATTGC 1610810 >seq75 Length=11204613 Score = 138 bits (152), Expect = 2e-27 Identities = 106/126 (84%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 |||||||||| ||||| | ||| |||||||||||||| || ||||| || || || || | Sbjct 8448220 CCTCATCTCTGCTAATCAGTTCATTAGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTCT 8448279 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 ||||||| ||||| | ||||| || |||||||||||||| ||||||||||||||||| | Sbjct 8448280 TGAGCCAGAATATTGATGCAAACGAGCCAGAAAAGAAGATTCCTTCTACTGCTGCAAAGG 8448339 Query 39759 CAACAA 39764 | |||| Sbjct 8448340 CTACAA 8448345 >seq199 Length=4383281 Score = 127 bits (140), Expect = 3e-24 Identities = 106/130 (82%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 |||||||||| || || | ||| || ||||| || ||||||||||| ||||| | ||| | Sbjct 4204743 CCTCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGACCTCTCTTCT 4204684 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 | ||||| ||||| |||||||||||||| || ||||| || |||||||| || ||||| | Sbjct 4204683 TCAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 4204624 Query 39759 CAACAAGTCT 39768 | |||| ||| Sbjct 4204623 CCACAACTCT 4204614 Score = 93.3 bits (102), Expect = 6e-14 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 40114 TACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACG 40173 ||| ||||| |||||||||||||| |||| ||||| ||| ||||| ||||| ||||| | Sbjct 4193742 TACCTCTTCTGCTGTCCAAAACGATGCCTGTGCCTGTTTATACATCTTCCAGATATCGGG 4193683 Query 40174 ATATTGTATTGGAAAAATAACAAATC 40199 || ||||||||||| || ||||||| Sbjct 4193682 GTACTGTATTGGAAAGATGACAAATC 4193657 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 39999 CCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAA 40058 ||||||||||||| || ||||||||||| || |||||||| || || | || |||| Sbjct 4196940 CCAAATTTTCATTTACAATTCCATCACTGGCTGCAAAAAAGGCTAAGATGTGAGAGATAA 4196881 Query 40059 AATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTTTTGATA 40109 |||| |||||||| || | | |||||||||| | || ||| ||||||| Sbjct 4196880 AATACTTTTCATCTGGCTTTAGCTTATTCCAGTGAGGGAGATCCTTTGATA 4196830 >seq79 Length=8883450 Score = 114 bits (126), Expect = 2e-20 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 68441 TCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATAT 68500 |||| || ||||| |||||||| || |||||| ||| | || || || ||||| || | Sbjct 703085 TCCAGCCATAGAAGTGCATACTGGTGAGTTTGCCATAGTTAGGTTCAGCAATATGGATGT 703144 Query 68501 TCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCT 68560 ||| || ||||||||||| |||||||| ||||| || || ||||| || | || | | | Sbjct 703145 TCAAAGACTGACTTTGATCAATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTTT 703204 Query 68561 TTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAA 68611 | || | |||||||| | ||||||| ||| || || | ||||| |||| Sbjct 703205 TCTGGGAGATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 703255 Score = 114 bits (126), Expect = 2e-20 Identities = 105/133 (79%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778 |||||||| || || || ||||| |||||||| || || |||||||| ||||| | || Sbjct 707240 TGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATAAGGTTCAATGGAC 707299 Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838 |||||||| |||| || ||||||||||| ||||| ||||| || || | | |||||| Sbjct 707300 TCATTATTCCCCAAGATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 707359 Query 68839 TTTCTAAGACCAT 68851 ||||| | ||||| Sbjct 707360 TTTCTTACACCAT 707372 Score = 111 bits (122), Expect = 2e-19 Identities = 126/169 (75%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 70331 CATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTA 70390 || ||||||| | ||| |||||||| ||||| || || |||| || || || ||||| | Sbjct 753040 CACCACTAAACACTTTCTTTGTTTCTTTGTGCAAGTTAGATACAGCAATCCTTGCTGCCA 753099 Query 70391 GAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTAT 70450 |||| ||||||||||| || | ||||| | || || ||| |||| ||||| || |||| Sbjct 753100 GAATGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTAT 753159 Query 70451 CTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCAT 70499 ||| ||| | | || || || |||| | ||||| || |||||||| Sbjct 753160 CTAGTTCAACCATGGTGACCCCACTATACAAGCCTTGGATTACTTTCAT 753208 Score = 102 bits (112), Expect = 1e-16 Identities = 144/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 68947 GATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAAT 69006 || || | ||| |||||||| || || | || || || || |||||||| || || || Sbjct 728182 GAGCCCTCATAGGTTTCATATGGACCGTACTCTTTGGCCAGGTCACAACTGGCTTCCAAG 728241 Query 69007 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCG 69066 || || |||||||| ||||| || || | |||||| || || || ||| |||| || Sbjct 728242 GCTCCATAATAAATAGTTTCAAAGATTTGCTTATTCAGTAACTGGGCCTCTGGACTCTCA 728301 Query 69067 AATGGATAATGTAA--AAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAG 69124 || ||||| | | | |||| |||| || || |||| || ||||||||||| || || | Sbjct 728302 AAAGGATA-TCTCATCAAGA-TAAAAGCGTCGGCCAGACCTTGAACCCCAATTCCAATGG 728359 Query 69125 GTCTATGTCTCTTATTTGA 69143 | | ||| | |||||||| Sbjct 728360 GGCGATGGCGTTTATTTGA 728378 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654 ||||||||||| || ||||| ||||||||||| || | || ||||| |||| | | Sbjct 735387 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGATCCCTGGCACGCTGC 735446 Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714 ||||| |||||||| || || || | |||||||||||| | || || ||||||| ||| Sbjct 735447 TCTTCCTTTCCTGTGTTCTTCTTTAAATCGAGAAACTCAAAGATGTCTAAATGCCAAGGT 735506 Query 69715 TCTAGATATATCGC 69728 || || || || || Sbjct 735507 TCCAGGTAAATAGC 735520 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 69507 ATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACA 69566 ||||||| || ||||| ||||||||||| ||||||| |||||||| ||||||||||| Sbjct 734934 ATATAGCTTCTCAAATTCTTCTCCCCAAACTTCATCCAGGCCAGGACACTCATTTGGACA 734993 Query 69567 CATCAATGACCA 69578 |||||||||||| Sbjct 734994 CATCAATGACCA 735005 >seq44217 Length=341162 Score = 86.0 bits (94), Expect = 9e-12 Identities = 244/368 (66%), Gaps = 13/368 (4%) Strand=Plus/Minus Query 37338 TTATTTCAGTCCTGTTGATCCAAACCCTTGAGCTCCTCTATCT-GTACCATCTAGAGATT 37396 |||||| ||| || || ||||| |||| | || || | | || |||| | | || Sbjct 123304 TTATTTTTTTCCAGTAGAACCAAAACCTTCTGAACC-CTGTGTAGTGTCATCCAAACCTT 123246 Query 37397 GTACTTCATTCAGATCAGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCGC 37456 | ||||| | | || || ||| | || |||| | | || ||||| || |||| || | Sbjct 123245 GAACTTCTTCTATTTCTGGGTAAAAAATTCGTTCACAAATGAGCTGTGCAATTCGGTCAC 123186 Query 37457 CCGTATTTATTTTAAAATTACATTTTCCATTATTTATCAGAATGACTCCAATATTCCCCC 37516 | | || | || ||| || ||| ||| ||| | || | || |||| ||| || | Sbjct 123185 CTTTTTTAACTTCAAACTTTTCTTTGCCAAAATTAAATAGTACAACACCAACATTTCCTC 123126 Query 37517 TATAATCTTCATCGATTACTCCGCCTCCTACATCAATAC-----CTTTTAGAGACAAACC 37571 ||||||||||||| || || || |||||||||| ||| |||| || ||| || Sbjct 123125 TATAATCTTCATCTATGACACCAGCTCCTACATC--TACGAAGTGTTTTGCAGCCAAGCC 123068 Query 37572 CGATCTAGGAGCTATTCTTCCATAACAAAATTTGGGCATAGACATCCGAATATCTGTTTT 37631 || | ||||||| |||||||||||| || | || ||| |||| || || || Sbjct 123067 AGAACATGGAGCTACTCTTCCATAACACCCAGAAGGAAGAGCTATCTGAATGTCAGTCTT 123008 Query 37632 AATCAATTGTCTTTCTCC--AGGAAGGATGGTATAATCGTACGCGCTATATAAATCATAT 37689 | ||| | |||||||| ||| | | || ||||| || || || || | || || Sbjct 123007 CA-CAA-GGGCTTTCTCCATAGGTGGCACTGTGTAATCATAGGCACTGTACAGGTCGTAG 122950 Query 37690 CCCGCGGC 37697 ||||| || Sbjct 122949 CCCGCCGC 122942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686473042230000