Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq75 86.0 7e-12 >seq75 Length=11204613 Score = 86.0 bits (94), Expect = 7e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 59980 AACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTA 60039 ||||| | |||| |||||| || |||||||||||||| ||||||||||| | | Sbjct 8448351 AACGTGTTGTAGCCTTTGCAGCAGTAGAAGGAATCTTCTTTTCTGGCTCGTTTGCATCAA 8448292 Query 60040 TTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTT 60099 | ||||||||||| || || || || ||||| ||||| | || || || || |||||| Sbjct 8448291 TATTCTGGCTCAAGAAACGAGGACTGATGCCCGGCCTCACATTTTCTAATGAACTGATTA 8448232 Query 60100 CCCGGGACGAGG 60111 | | || |||| Sbjct 8448231 GCAGAGATGAGG 8448220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548176829580000