Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_028751.1 Length=58671 Score E Sequences producing significant alignments: (Bits) Value seq49917 836 0.0 seq50663 491 2e-134 seq38559 300 6e-77 seq45035 107 7e-19 seq45817 98.7 4e-16 seq42881 93.3 2e-14 seq43497 82.4 3e-11 >seq49917 Length=2087 Score = 836 bits (926), Expect = 0.0 Identities = 938/1250 (75%), Gaps = 7/1250 (1%) Strand=Plus/Plus Query 14885 CCTCTCATCCCTTTGTTCATGGACTGCAAAAAGACGATGGTCGGTGTCATCGTCGAGACA 14944 || || |||| |||||||||||||| || || ||||||| ||| | ||||| Sbjct 67 CCACTGATCCAGATGTTCATGGACTGCCGCAACACCCTGGTCGGGGTCGAGATGGAGACC 126 Query 14945 GCCGGTTTGCGGTATGCGTTCTACACGAAGAACCACACCTACGAGTACCGCGACAGCGCA 15004 ||||| || | |||||||| ||| ||| |||| ||| | |||| Sbjct 127 GCCGGCAGCCGACAGAACTTCTACACCAAGGTTCACCGCTACCGCTACGAAAAGGGCGCG 186 Query 15005 TGGACCGGCACCGCTGAACTTCGCGGTATCCGCGACATCCTCAATTACTACGTGATTTGG 15064 ||||| |||| | || | ||||| || | |||||||| || ||||||||||| ||| Sbjct 187 TGGACAGGCAATGTCGAGATGCGCGGCATTTGGGACATCCTGAACTACTACGTGATCTGG 246 Query 15065 CCGTCGTGGTGGCTGCCGATTCAGGCACAGCCGTTCTCGCACGCGATCTTCGTGTGGGCG 15124 ||| |||||||||| || || || ||||| | |||||||| |||||| | |||||| Sbjct 247 CCGACGTGGTGGCTTCCCCTTGCCGCCCAGCCCATTTCGCACGCAATCTTCATCTGGGCG 306 Query 15125 CTGCAAACCGTCGTGGAGAACATGGTCGCAGAATGCGCTCTGCGGTTGCAGTCCGGGTGG 15184 || | ||| |||||||||||||||||| |||||||| ||||| | |||||||||||| Sbjct 307 CTACCGACCTGCGTGGAGAACATGGTCGCCGAATGCGCGCTGCGCATCCAGTCCGGGTGG 366 Query 15185 CTGGAGTTCATCAACAACGGGCTGTCGTTAAACC---CGG--ATATCCGGGCATGGTTCG 15239 ||||||||| ||||||||| ||||| | || ||| | |||||||||||| | | Sbjct 367 CTGGAGTTCGTCAACAACGCCCTGTCCCTCCACGGAACGGCGACATCCGGGCATGGATGG 426 Query 15240 GCACCGTTCTGCAAGCCCTGTCGCGGGACGGGCTGTCGGTCCAGGCGTTCACCCGCATGC 15299 ||||| | |||||||||| ||| ||| ||| ||||| ||| | ||| | |||| Sbjct 427 GCACCATCTTGCAAGCCCTCAAGCGCGACAAGCTCTCGGTGCAGACCTTCGGCAAGATGC 486 Query 15300 TGCGCACACCAGTGTATGTGTCACGCACCAATCCGTTGTTGGACACGTCTCCGATGGTGG 15359 ||||||| || |||||| |||||||| ||||| ||||||| || || ||| | Sbjct 487 TGCGCACCCCCACCTATGTGCAGCGCACCAACCCGTTCCTGGACACATCGCCCATGTGCG 546 Query 15360 CGCGGACAGTGCGGATGGAAACAGTGCAGGCCG-TCATCAAGGACGTTACCCAGTCGTAC 15418 | ||| || || |||||||| ||| | || |||||||||| || |||| | ||| Sbjct 547 CCAAGACCGTTCGCATGGAAACC-TGCGGAACGGTCATCAAGGATGTCACCCGCGCCTAC 605 Query 15419 GGTGTGGATACCCGCATGGATTTGTGGCTGCCGGGTGATCCGCAACCGGACAGGTGGGCG 15478 |||||||| ||||||||||| |||||| |||||||| ||||||||||||| |||||| Sbjct 606 GGTGTGGACACCCGCATGGACCTGTGGCGCCCGGGTGACCCGCAACCGGACAAGTGGGCC 665 Query 15479 AACCTGGACCAGCCGACGTACGTGTTCTCCACCGTCGACCGATCACAGGTTTCTGGGCCG 15538 ||||| || ||| || |||||||| |||||| ||||| ||| | || ||||| Sbjct 666 AACCTCGATTCGCCCACCTACGTGTTTTCCACCCGGGACCGCCAGCAGATCTCGGGGCCC 725 Query 15539 ACGAAAACCGTGCTCGATTCGGTGCTGCGCACCACGATTGACCTTGGCGGGTCGCTGGGG 15598 || |||||||| |||||||||| | || ||| ||||| ||||| || || || Sbjct 726 ACCAAAACCGTTGCCGATTCGGTGATCAAGACGGTGATCGACCTCGGCGGATCACTCGGT 785 Query 15599 GACATCTTCAAACCGGTCATCAAGCAGGTTCCCGGCATGGACGGCGTGTTTTATGCGCCC 15658 ||||||||||| || |||||| ||||||| ||||| ||| |||| ||||| || || ||| Sbjct 786 GACATCTTCAAGCCAGTCATCCAGCAGGTACCCGGTATGAACGGGGTGTTCTACGCCCCC 845 Query 15659 GCGTTGGGTGTGGATTTCGAGCAGCCATACGCCTATTTCGTGGCCCCCGAGCCGGGTGAG 15718 | | ||||| |||||||||||||| |||||||| |||| |||||||| ||| ||| Sbjct 846 AAGCTCGGTGTCGATTTCGAGCAGCCCTACGCCTACGTCGTCGCCCCCGAAGAGGGCGAG 905 Query 15719 GACACCGGTATCGATGCGTGCACGATCACCGACCACACACCCGAGGGTTGGCAGCACATC 15778 ||| || ||| ||| ||| |||||||||| |||||||| ||||| |||||| Sbjct 906 GACTCCAACATCATCAACTGCGAAATCGCCGACCACACCCCCGAGGGCTGGCAACACATC 965 Query 15779 ATCGGTGGGCGCAGCCCAAAATGGTTGAACGACCTGATGAACGCCACCTTCGCATGGCTA 15838 ||||| || || ||||| |||||||||||| | ||||| |||||||||||| || Sbjct 966 ATCGGCGGCCGTTCTCCAAAGTGGTTGAACGACTTAATGAATGCCACCTTCGCAGGGTGG 1025 Query 15839 ATCGACTCGCTGATGATCGTTGTTGGATTCACCGGCATACCGTCCGATCTGCTGTCGGGT 15898 || | |||||||||||||| || || ||| ||||||| ||||| |||||||| ||||| Sbjct 1026 ATGTATTCGCTGATGATCGTGGTCGGGTTCTCCGGCATCCCGTCGGATCTGCTCTCGGGA 1085 Query 15899 TTCCTGAACAACAGCTTCCTGGCGTTCCAGTTGATTCAGCATTACGACCGCCGTGATGAT 15958 |||||||||||||||||||||||||||||| || | ||| ||| | ||| || || Sbjct 1086 TTCCTGAACAACAGCTTCCTGGCGTTCCAGATGGTCCAGGTGTACCAGGTCCGCGACGAG 1145 Query 15959 GTCGGCCCGTACCATCCGGCGATCGAGCGGTTCTATCCGACAGCCTCAGCGCCGTACAAC 16018 || ||||| | ||||||||||||||||||||||| ||||| ||| || ||||||||| Sbjct 1146 GTGGGCCCTTTTCATCCGGCGATCGAGCGGTTCTACCCGACCGCCAGCGCCCCGTACAAC 1205 Query 16019 ATCGAAACGGTGTTCGCATTCATCAACGCCTTGTTTGATTCGCAGGGCAAGACGACGGCG 16078 |||||||| ||||||| ||||||||||| | || ||| | || || || |||||| Sbjct 1206 ATCGAAACCATGTTCGCGTTCATCAACGCGATTTTCGATGCCCAAGGTGCTACCACGGCG 1265 Query 16079 ACGGTGCAGTTCCGCAACGGTGCCCAGTATGCGTTGGGTCGGGACGTTTT 16128 ||| ||||||||||||| ||| ||||| || || || ||| |||| Sbjct 1266 CAGGTCACTTTCCGCAACGGTGACCAATATGCCTTAGGCCGAGACATTTT 1315 >seq50663 Length=1982 Score = 491 bits (544), Expect = 2e-134 Identities = 476/609 (78%), Gaps = 2/609 (0%) Strand=Plus/Plus Query 15617 ATCAAGCAGGTTCCCGGCATGGACGGCGTGTTTTATGCGCCCGCGTTGGGTGTGGATTTC 15676 || ||||| | |||||||||||||| |||||||| ||||| | |||||| | ||| Sbjct 1330 ATGAAGCAAGACCCCGGCATGGACGGGGTGTTTTACGCGCCGCTACTCGGTGTGAACTTC 1389 Query 15677 GAGCAGCCATACGCCTATTTCGTGGCCCCCGAGCCGGGTGAGGACACCGGTATCGATGCG 15736 ||||| || ||||||||| | || || || || | ||||||||| | ||| || Sbjct 1390 GAGCAACCCTACGCCTATCTTGTTGCGCCAGAATCCGGTGAGGACTCATCCATCACCTCG 1449 Query 15737 TGCACGATCACCGACCACACACCCGAGGGTTGGCAGCACATCATCGGTGGGCGCAGCCCA 15796 ||| ||||||| |||| || ||||||||||||||||||||||||||||| || ||||| Sbjct 1450 TGCCGGATCACCAACCATACCCCCGAGGGTTGGCAGCACATCATCGGTGGCCGTAGCCCT 1509 Query 15797 AAATGGTTGAACGACCTGATGAACGCCACCTTCGCATGGCTAATCGACTCGCTGATGATC 15856 || |||||||||||| ||||||| ||||| ||||| ||| | ||||| |||||||||||| Sbjct 1510 AAGTGGTTGAACGACTTGATGAATGCCACGTTCGCGTGGTTGATCGATTCGCTGATGATC 1569 Query 15857 GTTGTTGGATTCACCGGCATACCGTCCGATCTGCTGTCGGGTTTCCTGAACAACAGCTTC 15916 || || || ||| |||| || || || || ||||| || || |||||||||||||||||| Sbjct 1570 GTGGTCGGGTTCTCCGGTATCCCATCAGACCTGCTATCCGGCTTCCTGAACAACAGCTTC 1629 Query 15917 CTGGCGTTCCAGTTGATTCAGCATTACGACCGCCGTGATGATGTCGGCCCGTACCATCCG 15976 ||||| |||||| | | ||||| |||||||| || || || |||||||| ||||| || Sbjct 1630 CTGGCCTTCCAGCTCCTGCAGCACTACGACCGACGCGACGAAGTCGGCCCCTACCACCCA 1689 Query 15977 GCGATCGAGCGGTTCTATCCGACAGCCTCAGCGCCGTACAACATCGAAACGGTGTTCGCA 16036 ||| ||||||| |||||||| || || ||||| || |||||||||||||| || ||||| Sbjct 1690 GCGGTCGAGCGCTTCTATCCCACCGCATCAGCCCCCTACAACATCGAAACAGTATTCGCG 1749 Query 16037 TTCATCAACGCCTTGTTTGATTCGCAGGGCAAGACGACGGCGACGGTGCAGTTCCGCAAC 16096 |||||||||||| | |||||||| |||||| | || || || || ||||||||| Sbjct 1750 TTCATCAACGCCCTCTTTGATTCACAGGGCTACACCACCGCACAAGTCACGTTCCGCAAT 1809 Query 16097 GGTGCCCAGTATGCGTTGGGTCGGGACGTTTTTCGCGGCGGCCTGATGTCGCTGGTGT-T 16155 |||| ||| || || ||||| | |||||||| ||||| |||||||| | || | Sbjct 1810 GGTGACCAATACGCCTTGGGAAGAGACGTTTTCAAGGGCGGATTGATGTCGGTCGTCTAC 1869 Query 16156 CATGTCACGTACCCGAATGGTGACTGACTACATCGAGAACGTGATGTGGCGGGCAACTCA 16215 || | | || ||| ||||| || ||||||||||||||||| |||||||| |||| Sbjct 1870 CACGGC-CGAACCAAGATGGTCACCGACTACATCGAGAACGTCATGTGGCGCATCACTCC 1928 Query 16216 GGATGAGCG 16224 |||||||| Sbjct 1929 AGATGAGCG 1937 Score = 188 bits (208), Expect = 3e-43 Identities = 212/284 (75%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 15173 CAGTCCGGGTGGCTGGAGTTCATCAACAACGGGCTGTCGTTAAACCCGGATATCCGGGCA 15232 ||||| |||||| |||| ||| ||||||||||| ||||| ||||| || ||||| ||| Sbjct 894 CAGTCGGGGTGGATGGAAGCCATTAACAACGGGCTCTCGTTGAACCCCGACATCCGTGCA 953 Query 15233 TGGTTCGGCACCGTTCTGCAAGCCCTGTCGCGGGACGGGCTGTCGGTCCAGGCGTTCACC 15292 |||||||||||| | |||||||||||| || || || |||||| | || | ||| | Sbjct 954 TGGTTCGGCACCATCCTGCAAGCCCTGGACCGCGATGGCCTGTCGATTAAGACCTTCGCG 1013 Query 15293 CGCATGCTGCGCACACCAGTGTATGTGTCACGCACCAATCCGTTGTTGGACACGTCTCCG 15352 |||||||| ||||| ||| |||||| || ||||| ||||| ||||||| || ||| Sbjct 1014 CGCATGCTACGCACGCCAACGTATGTCAAGCGAACCAACCCGTTCCTGGACACATCCCCG 1073 Query 15353 ATGGTGGCGCGGACAGTGCGGATGGAAACAGTGCAGGCCGTCATCAAGGACGTTACCCAG 15412 || || ||| || || ||||| || || | || |||||||| || || | Sbjct 1074 TTGTGTGCCAAGACCGTCCGCATGGAGACCGTTGGCTCGGTAATCAAGGATGTCACGCGA 1133 Query 15413 TCGTACGGTGTGGATACCCGCATGGATTTGTGGCTGCCGGGTGA 15456 | |||||||| |||||||| |||||| |||||| ||| || || Sbjct 1134 GCCTACGGTGTAGATACCCGTATGGATCTGTGGCGGCCCGGGGA 1177 Score = 141 bits (156), Expect = 3e-29 Identities = 234/338 (69%), Gaps = 0/338 (0%) Strand=Plus/Plus Query 14771 TGCGACAAGTTTTGGCAGCCGATGGGCGCTGTCGGTGGCGACCTGATCGAGGCGTCGGGT 14830 |||| |||||| ||| || ||||| |||| ||| || || ||||||||||| Sbjct 479 TGCGGCAAGTTCTGGACACCCATGGGGTTAATCGGCAACGAACTCATGGAGGCGTCGGGG 538 Query 14831 GCTGACCCGCGCAACGATGTTGAAACCGGCCGGATCGTCCTCAAAGGGAACAGCCCTCTC 14890 | || || || || || |||| ||||||| | ||| || | ||||||||| Sbjct 539 ACCGATCCCCGTAATGACTGCCCTACCGCCCGGATCAAGCACAAGGGTGATAGCCCTCTC 598 Query 14891 ATCCCTTTGTTCATGGACTGCAAAAAGACGATGGTCGGTGTCATCGTCGAGACAGCCGGT 14950 | | |||||||||||||| || |||||||| || | || ||||| || || Sbjct 599 GTGCAGATGTTCATGGACTGCCGGAACACGATGGTGGGCATTGAGGTAGAGACCGCGGGG 658 Query 14951 TTGCGGTATGCGTTCTACACGAAGAACCACACCTACGAGTACCGCGACAGCGCATGGACC 15010 ||||| | |||||| || || ||| || ||||||| ||| |||| ||||| Sbjct 659 CTGCGGCAGAACTTCTACGTCAAAAAGCACGACTGGGAGTACCAAGACGGCGCTTGGACG 718 Query 15011 GGCACCGCTGAACTTCGCGGTATCCGCGACATCCTCAATTACTACGTGATTTGGCCGTCG 15070 || || | ||| || |||||| | ||||| ||||| || |||||||| |||||||| Sbjct 719 GGAACTGTTGAGGCCCGGGGTATCTGGGACATACTCAACTATTACGTGATATGGCCGTCA 778 Query 15071 TGGTGGCTGCCGATTCAGGCACAGCCGTTCTCGCACGC 15108 |||||||| || ||||| | |||||| || ||||| Sbjct 779 TGGTGGCTACCCCCACAGGCCCCGCCGTTTTCTCACGC 816 Score = 84.2 bits (92), Expect = 8e-12 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 14337 GCATTCACTGACCAGATCGGGTCGCTGTTCGGGATTGTTCCCCCGCAGGGCAATTTCTAC 14396 || ||| ||| |||||| |||| | ||||| || ||| ||||| || ||| | ||| Sbjct 90 GCGTTCGGTGATCAGATCAAGTCGTTCTTCGGCATCCGTCCACCGCAAGGGAATCTGTAC 149 Query 14397 AAGTACCTGTCGGGCCGGTTCAGTGAGAACGCGGCGATCCCCGCGAAGTCACCCGGCGA 14455 |||||||| |||||||||| |||| ||||||||||| |||| || |||||||| Sbjct 150 AAGTACCTCAAGGGCCGGTTCTCCCAGAATGCGGCGATCCCACCGAAATCGCCCGGCGA 208 >seq38559 Length=768 Score = 300 bits (332), Expect = 6e-77 Identities = 290/370 (78%), Gaps = 2/370 (1%) Strand=Plus/Plus Query 15838 AATCGACTCGCTGATGATCGTTGTTGGATTCACCGGCATACCGTCCGATCTGCTGTCGGG 15897 |||||| ||||||||||||| || || ||| |||| || || || || ||||| || || Sbjct 388 AATCGATGCGCTGATGATCGTGGTCGGGTTCTCCGGTATCCCATCAGACCTGCTATCCGG 447 Query 15898 TTTCCTGAACAACAGCTTCCTGGCGTTCCAGTTGATTCAGCATTACGACCGCCGTGATGA 15957 ||||||||||||||||||||||| |||||| | || ||||| |||||||| || || || Sbjct 448 CTTCCTGAACAACAGCTTCCTGGCCTTCCAGCTCATGCAGCACTACGACCGACGCGACGA 507 Query 15958 TGTCGGCCCGTACCATCCGGCGATCGAGCGGTTCTATCCGACAGCCTCAGCGCCGTACAA 16017 |||||||| ||||| || ||| ||||||| |||||||| || || ||||| || ||||| Sbjct 508 AGTCGGCCCCTACCACCCAGCGGTCGAGCGCTTCTATCCCACCGCATCAGCCCCCTACAA 567 Query 16018 CATCGAAACGGTGTTCGCATTCATCAACGCCTTGTTTGATTCGCAGGGCAAGACGACGGC 16077 ||||||||| || ||||| |||||||||||| | |||||||| |||||| | || || || Sbjct 568 CATCGAAACAGTATTCGCGTTCATCAACGCCCTCTTTGATTCACAGGGCTACACCACCGC 627 Query 16078 GACGGTGCAGTTCCGCAACGGTGCCCAGTATGCGTTGGGTCGGGACGTTTTTCGCGGCGG 16137 || ||||||||| |||| ||| || || ||||| | |||||||| ||||| Sbjct 628 ACAAGTCACGTTCCGCAATGGTGACCAATACGCCTTGGGAAGAGACGTTTTCAAGGGCGG 687 Query 16138 CCTGATGTCGCTGGTGT-TCATGTCACGTACCCGAATGGTGACTGACTACATCGAGAACG 16196 |||||||| | || | || | | || ||| ||||| || |||||| ||||||||| Sbjct 688 ATTGATGTCGGTCGTCTACCACGGC-CGAACCAAGATGGTCACCGACTACCTCGAGAACG 746 Query 16197 TGATGTGGCG 16206 | |||||||| Sbjct 747 TCATGTGGCG 756 Score = 136 bits (150), Expect = 1e-27 Identities = 194/273 (71%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 15449 CCGGGTGATCCGCAACCGGACAGGTGGGCGAACCTGGACCAGCCGACGTACGTGTTCTCC 15508 || |||||| ||| || || |||| | ||| || || || || || || || || Sbjct 1 CCCGGTGATGAGCAGCCCGATCAGTGGATCACCCTCGATCAACCCACATATGTCTTTTCG 60 Query 15509 ACCGTCGACCGATCACAGGTTTCTGGGCCGACGAAAACCGTGCTCGATTCGGTGCTGCGC 15568 || |||||||| || | || || || ||||| || || |||||||| |||| Sbjct 61 ACTGTCGACCGCAGCCAAATCGAAGGCCCCACAAAAACTGTCCTTGATTCGGTCTTGCGG 120 Query 15569 ACCACGATTGACCTTGGCGGGTCGCTGGGGGACATCTTCAAACCGGTCATCAAGCAGGTT 15628 || | ||||| || || ||||| || | |||||||| |||||||| ||||| || Sbjct 121 ACGGTAGTGGACCTGGGTGGATCGCTCGGCGGGATCTTCAAGCCGGTCATGAAGCAAGTC 180 Query 15629 CCCGGCATGGACGGCGTGTTTTATGCGCCCGCGTTGGGTGTGGATTTCGAGCAGCCATAC 15688 |||||||||||||| ||||| || ||||| | |||||| | |||||||| || ||| Sbjct 181 CCCGGCATGGACGGGGTGTTCTACGCGCCGCTACTCGGTGTGAACTTCGAGCAACCCTAC 240 Query 15689 GCCTATTTCGTGGCCCCCGAGCCGGGTGAGGAC 15721 |||||| | || || || || | ||||||||| Sbjct 241 GCCTATCTTGTTGCGCCAGAATCCGGTGAGGAC 273 >seq45035 Length=256 Score = 107 bits (118), Expect = 7e-19 Identities = 119/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 14142 TATGACGGTCCCGGCGCGGATGAGTATGTGGAGTTTGGTCCGCTGCTGCCCAATCAGATT 14201 || ||||| |||||| |||| | ||||| || || || |||||||| ||||||||| | Sbjct 59 TACGACGGGCCCGGCTCGGACCAATATGTCGAATTCGGGCCGCTGCTACCCAATCAGGTG 118 Query 14202 GTGTTCCTACGTACCGACCCGCGCTCACAGACGACGTTGGTGCAGGATTTGACGTCGGTG 14261 ||||| | || ||||| |||||| || || || |||||| | || | || |||||| Sbjct 119 GTGTTTTTGCGCACCGATCCGCGCGTGCACACCACCTTGGTGAAAGACCTAACCTCGGTG 178 Query 14262 CCGCCGTCGCCGCAGGAGTTGAACATTTTCCAGCAGGCG 14300 ||||| || |||||||| | | | |||||| ||||| Sbjct 179 CCGCCCTCACCGCAGGAACTCGATTTGTTCCAGGAGGCG 217 >seq45817 Length=532 Score = 98.7 bits (108), Expect = 4e-16 Identities = 87/109 (80%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 36207 CATCGTGTCCGAGTCGGGCATGTACGAGGTCGTCATCCGCTCCGACAAGCCAGAGGCCGT 36266 |||||||||||| |||||||||||||||||||||| ||||| |||||||| ||||| || Sbjct 109 CATCGTGTCCGAAGCGGGCATGTACGAGGTCGTCATACGCTCGGACAAGCCCGAGGCTGT 50 Query 36267 CAAGTTCCGCCGCTGGATCACCGGCGAGGTGCTGCCTGCAATCCGCAAG 36315 | ||||||| || | | || || ||| ||||| | ||||| ||| Sbjct 49 CGAGTTCCGGCGTTTCGTTACGGGTACGGTTCTGCCCTCCATCCGAAAG 1 >seq42881 Length=1721 Score = 93.3 bits (102), Expect = 2e-14 Identities = 147/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 11464 TGGGGCAGATCGGTGCCCAGCTTGATCAGGATTTCGGTATCTCGAAGGGTTTGGCGGGGA 11523 ||||| |||| || ||| |||| ||| || ||||| ||| ||||| | | || Sbjct 1488 TGGGGGAGATTGGCGCCAAGCTGGATGCCGACTTCGGCGCCTCCAAGGGCCTCGGTGGAC 1547 Query 11524 TCGCGGAGAACATCACGAAGTTCGTGGCGAACCTTGCCGCGGCCCCGTTGTTGGGGCAGT 11583 | || ||||| | ||||||||||| ||||| || || || ||| || | |||||| Sbjct 1548 TTGCCGAGAATCTAACGAAGTTCGTCGCGAATCTCGCGTTCGCGCCGATGCTTGGGCAGC 1607 Query 11584 TGCAG-GCCATTTCGGCGTATAGCCCGACGCAGGGTGGGCACGGGTTGATGGGTGTCCTC 11642 | ||| || || || | ||| | |||| || ||||| ||||||| ||||| Sbjct 1608 T-CAGCGCTATAAGCGCCGCCAACCCCTCCAAGGGCGGATACGGGATGATGGGCATCCTC 1666 Query 11643 GGTGCGCAGGGTGTGTTCGGGCCGCAGT 11670 || ||||||||||| ||||||||||||| Sbjct 1667 GGGGCGCAGGGTGTATTCGGGCCGCAGT 1694 >seq43497 Length=1050 Score = 82.4 bits (90), Expect = 3e-11 Identities = 181/269 (67%), Gaps = 18/269 (7%) Strand=Plus/Plus Query 17200 GTTTTCGGTTGAGGTTCTTCCGCTGTCATGACGTCATCGTTTGATCCGTTGCCGGAGTGG 17259 ||||| || ||||||||| ||||||| | ||||| | | || || ||| Sbjct 3 GTTTTGGGCTGAGGTTCTGCCGCTGTGA------CATCGGG------GATTCCCGAATGG 50 Query 17260 GCTCATGCGGTGCCGTCTGAGCCGGGTATTCACCCGGAACAGTCGGCGTTGCAGTGGCAG 17319 || || ||| | ||||||| || | | || | ||| ||| | | || || || Sbjct 51 GCGCAGGCGATCCCGTCTGCCCCAG---TCCATCAGGAGCAGCC--CAATGAGCTGACA- 104 Query 17320 CGTCCGTTCACTGTTCAGCAGCTGCTTGAGATTGGTGAGCAGTTCATCGAGCAGTTTTTG 17379 || |||||||| | |||||||| ||||| | ||||| ||| ||||||||||||| || Sbjct 105 CGGCCGTTCACGGCGCAGCAGCTCATTGAGTTCGGTGAACAGCTCATCGAGCAGTTCCTG 164 Query 17380 GCGTGGGTGGTGCGCGCGGTCGCTGGGGTGTTCATCCCTGGTGAGGCGTCGTTCGACCAG 17439 | | || || | || || | || |||||||| ||||| | |||||||| ||| Sbjct 165 CGGCGCGTAGTCCTGGCCGTGGTCGGCTCATTCATCCCCGGTGAAGGCTCGTTCGAGCAG 224 Query 17440 TTGCGTGATTGGGCTTTGAACATCCCCAT 17468 || || ||||| | | ||||||||| Sbjct 225 CTGGAGGAATGGGCATACAGCATCCCCAT 253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187512526259500