Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_028889.1 Length=59416 Score E Sequences producing significant alignments: (Bits) Value seq49917 836 0.0 seq50663 491 2e-134 seq38559 300 6e-77 seq45035 107 7e-19 seq45817 98.7 4e-16 seq42881 93.3 2e-14 seq43497 82.4 3e-11 >seq49917 Length=2087 Score = 836 bits (926), Expect = 0.0 Identities = 938/1250 (75%), Gaps = 7/1250 (1%) Strand=Plus/Plus Query 15077 CCTCTCATCCCTTTGTTCATGGACTGCAAAAAGACGATGGTCGGTGTCATCGTCGAGACA 15136 || || |||| |||||||||||||| || || ||||||| ||| | ||||| Sbjct 67 CCACTGATCCAGATGTTCATGGACTGCCGCAACACCCTGGTCGGGGTCGAGATGGAGACC 126 Query 15137 GCCGGTTTGCGGTATGCGTTCTACACGAAGAACCACACCTACGAGTACCGCGACAGCGCA 15196 ||||| || | |||||||| ||| ||| |||| ||| | |||| Sbjct 127 GCCGGCAGCCGACAGAACTTCTACACCAAGGTTCACCGCTACCGCTACGAAAAGGGCGCG 186 Query 15197 TGGACCGGCACCGCTGAACTTCGCGGTATCCGCGACATCCTCAATTACTACGTGATTTGG 15256 ||||| |||| | || | ||||| || | |||||||| || ||||||||||| ||| Sbjct 187 TGGACAGGCAATGTCGAGATGCGCGGCATTTGGGACATCCTGAACTACTACGTGATCTGG 246 Query 15257 CCGTCGTGGTGGCTGCCGATTCAGGCACAGCCGTTCTCGCACGCGATCTTCGTGTGGGCG 15316 ||| |||||||||| || || || ||||| | |||||||| |||||| | |||||| Sbjct 247 CCGACGTGGTGGCTTCCCCTTGCCGCCCAGCCCATTTCGCACGCAATCTTCATCTGGGCG 306 Query 15317 CTGCAAACCGTCGTGGAGAACATGGTCGCAGAATGCGCTCTGCGGTTGCAGTCCGGGTGG 15376 || | ||| |||||||||||||||||| |||||||| ||||| | |||||||||||| Sbjct 307 CTACCGACCTGCGTGGAGAACATGGTCGCCGAATGCGCGCTGCGCATCCAGTCCGGGTGG 366 Query 15377 CTGGAGTTCATCAACAACGGGCTGTCGTTAAACC---CGG--ATATCCGGGCATGGTTCG 15431 ||||||||| ||||||||| ||||| | || ||| | |||||||||||| | | Sbjct 367 CTGGAGTTCGTCAACAACGCCCTGTCCCTCCACGGAACGGCGACATCCGGGCATGGATGG 426 Query 15432 GCACCGTTCTGCAAGCCCTGTCGCGGGACGGGCTGTCGGTCCAGGCGTTCACCCGCATGC 15491 ||||| | |||||||||| ||| ||| ||| ||||| ||| | ||| | |||| Sbjct 427 GCACCATCTTGCAAGCCCTCAAGCGCGACAAGCTCTCGGTGCAGACCTTCGGCAAGATGC 486 Query 15492 TGCGCACACCAGTGTATGTGTCACGCACCAATCCGTTGTTGGACACGTCTCCGATGGTGG 15551 ||||||| || |||||| |||||||| ||||| ||||||| || || ||| | Sbjct 487 TGCGCACCCCCACCTATGTGCAGCGCACCAACCCGTTCCTGGACACATCGCCCATGTGCG 546 Query 15552 CGCGGACAGTGCGGATGGAAACAGTGCAGGCCG-TCATCAAGGACGTTACCCAGTCGTAC 15610 | ||| || || |||||||| ||| | || |||||||||| || |||| | ||| Sbjct 547 CCAAGACCGTTCGCATGGAAACC-TGCGGAACGGTCATCAAGGATGTCACCCGCGCCTAC 605 Query 15611 GGTGTGGATACCCGCATGGATTTGTGGCTGCCGGGTGATCCGCAACCGGACAGGTGGGCG 15670 |||||||| ||||||||||| |||||| |||||||| ||||||||||||| |||||| Sbjct 606 GGTGTGGACACCCGCATGGACCTGTGGCGCCCGGGTGACCCGCAACCGGACAAGTGGGCC 665 Query 15671 AACCTGGACCAGCCGACGTACGTGTTCTCCACCGTCGACCGATCACAGGTTTCTGGGCCG 15730 ||||| || ||| || |||||||| |||||| ||||| ||| | || ||||| Sbjct 666 AACCTCGATTCGCCCACCTACGTGTTTTCCACCCGGGACCGCCAGCAGATCTCGGGGCCC 725 Query 15731 ACGAAAACCGTGCTCGATTCGGTGCTGCGCACCACGATTGACCTTGGCGGGTCGCTGGGG 15790 || |||||||| |||||||||| | || ||| ||||| ||||| || || || Sbjct 726 ACCAAAACCGTTGCCGATTCGGTGATCAAGACGGTGATCGACCTCGGCGGATCACTCGGT 785 Query 15791 GACATCTTCAAACCGGTCATCAAGCAGGTTCCCGGCATGGACGGCGTGTTTTATGCGCCC 15850 ||||||||||| || |||||| ||||||| ||||| ||| |||| ||||| || || ||| Sbjct 786 GACATCTTCAAGCCAGTCATCCAGCAGGTACCCGGTATGAACGGGGTGTTCTACGCCCCC 845 Query 15851 GCGTTGGGTGTGGATTTCGAGCAGCCATACGCCTATTTCGTGGCCCCCGAGCCGGGTGAG 15910 | | ||||| |||||||||||||| |||||||| |||| |||||||| ||| ||| Sbjct 846 AAGCTCGGTGTCGATTTCGAGCAGCCCTACGCCTACGTCGTCGCCCCCGAAGAGGGCGAG 905 Query 15911 GACACCGGTATCGATGCGTGCACGATCACCGACCACACACCCGAGGGTTGGCAGCACATC 15970 ||| || ||| ||| ||| |||||||||| |||||||| ||||| |||||| Sbjct 906 GACTCCAACATCATCAACTGCGAAATCGCCGACCACACCCCCGAGGGCTGGCAACACATC 965 Query 15971 ATCGGTGGGCGCAGCCCAAAATGGTTGAACGACCTGATGAACGCCACCTTCGCATGGCTA 16030 ||||| || || ||||| |||||||||||| | ||||| |||||||||||| || Sbjct 966 ATCGGCGGCCGTTCTCCAAAGTGGTTGAACGACTTAATGAATGCCACCTTCGCAGGGTGG 1025 Query 16031 ATCGACTCGCTGATGATCGTTGTTGGATTCACCGGCATACCGTCCGATCTGCTGTCGGGT 16090 || | |||||||||||||| || || ||| ||||||| ||||| |||||||| ||||| Sbjct 1026 ATGTATTCGCTGATGATCGTGGTCGGGTTCTCCGGCATCCCGTCGGATCTGCTCTCGGGA 1085 Query 16091 TTCCTGAACAACAGCTTCCTGGCGTTCCAGTTGATTCAGCATTACGACCGCCGTGATGAT 16150 |||||||||||||||||||||||||||||| || | ||| ||| | ||| || || Sbjct 1086 TTCCTGAACAACAGCTTCCTGGCGTTCCAGATGGTCCAGGTGTACCAGGTCCGCGACGAG 1145 Query 16151 GTCGGCCCGTACCATCCGGCGATCGAGCGGTTCTATCCGACAGCCTCAGCGCCGTACAAC 16210 || ||||| | ||||||||||||||||||||||| ||||| ||| || ||||||||| Sbjct 1146 GTGGGCCCTTTTCATCCGGCGATCGAGCGGTTCTACCCGACCGCCAGCGCCCCGTACAAC 1205 Query 16211 ATCGAAACGGTGTTCGCATTCATCAACGCCTTGTTTGATTCGCAGGGCAAGACGACGGCG 16270 |||||||| ||||||| ||||||||||| | || ||| | || || || |||||| Sbjct 1206 ATCGAAACCATGTTCGCGTTCATCAACGCGATTTTCGATGCCCAAGGTGCTACCACGGCG 1265 Query 16271 ACGGTGCAGTTCCGCAACGGTGCCCAGTATGCGTTGGGTCGGGACGTTTT 16320 ||| ||||||||||||| ||| ||||| || || || ||| |||| Sbjct 1266 CAGGTCACTTTCCGCAACGGTGACCAATATGCCTTAGGCCGAGACATTTT 1315 >seq50663 Length=1982 Score = 491 bits (544), Expect = 2e-134 Identities = 476/609 (78%), Gaps = 2/609 (0%) Strand=Plus/Plus Query 15809 ATCAAGCAGGTTCCCGGCATGGACGGCGTGTTTTATGCGCCCGCGTTGGGTGTGGATTTC 15868 || ||||| | |||||||||||||| |||||||| ||||| | |||||| | ||| Sbjct 1330 ATGAAGCAAGACCCCGGCATGGACGGGGTGTTTTACGCGCCGCTACTCGGTGTGAACTTC 1389 Query 15869 GAGCAGCCATACGCCTATTTCGTGGCCCCCGAGCCGGGTGAGGACACCGGTATCGATGCG 15928 ||||| || ||||||||| | || || || || | ||||||||| | ||| || Sbjct 1390 GAGCAACCCTACGCCTATCTTGTTGCGCCAGAATCCGGTGAGGACTCATCCATCACCTCG 1449 Query 15929 TGCACGATCACCGACCACACACCCGAGGGTTGGCAGCACATCATCGGTGGGCGCAGCCCA 15988 ||| ||||||| |||| || ||||||||||||||||||||||||||||| || ||||| Sbjct 1450 TGCCGGATCACCAACCATACCCCCGAGGGTTGGCAGCACATCATCGGTGGCCGTAGCCCT 1509 Query 15989 AAATGGTTGAACGACCTGATGAACGCCACCTTCGCATGGCTAATCGACTCGCTGATGATC 16048 || |||||||||||| ||||||| ||||| ||||| ||| | ||||| |||||||||||| Sbjct 1510 AAGTGGTTGAACGACTTGATGAATGCCACGTTCGCGTGGTTGATCGATTCGCTGATGATC 1569 Query 16049 GTTGTTGGATTCACCGGCATACCGTCCGATCTGCTGTCGGGTTTCCTGAACAACAGCTTC 16108 || || || ||| |||| || || || || ||||| || || |||||||||||||||||| Sbjct 1570 GTGGTCGGGTTCTCCGGTATCCCATCAGACCTGCTATCCGGCTTCCTGAACAACAGCTTC 1629 Query 16109 CTGGCGTTCCAGTTGATTCAGCATTACGACCGCCGTGATGATGTCGGCCCGTACCATCCG 16168 ||||| |||||| | | ||||| |||||||| || || || |||||||| ||||| || Sbjct 1630 CTGGCCTTCCAGCTCCTGCAGCACTACGACCGACGCGACGAAGTCGGCCCCTACCACCCA 1689 Query 16169 GCGATCGAGCGGTTCTATCCGACAGCCTCAGCGCCGTACAACATCGAAACGGTGTTCGCA 16228 ||| ||||||| |||||||| || || ||||| || |||||||||||||| || ||||| Sbjct 1690 GCGGTCGAGCGCTTCTATCCCACCGCATCAGCCCCCTACAACATCGAAACAGTATTCGCG 1749 Query 16229 TTCATCAACGCCTTGTTTGATTCGCAGGGCAAGACGACGGCGACGGTGCAGTTCCGCAAC 16288 |||||||||||| | |||||||| |||||| | || || || || ||||||||| Sbjct 1750 TTCATCAACGCCCTCTTTGATTCACAGGGCTACACCACCGCACAAGTCACGTTCCGCAAT 1809 Query 16289 GGTGCCCAGTATGCGTTGGGTCGGGACGTTTTTCGCGGCGGCCTGATGTCGCTGGTGT-T 16347 |||| ||| || || ||||| | |||||||| ||||| |||||||| | || | Sbjct 1810 GGTGACCAATACGCCTTGGGAAGAGACGTTTTCAAGGGCGGATTGATGTCGGTCGTCTAC 1869 Query 16348 CATGTCACGTACCCGAATGGTGACTGACTACATCGAGAACGTGATGTGGCGGGCAACTCA 16407 || | | || ||| ||||| || ||||||||||||||||| |||||||| |||| Sbjct 1870 CACGGC-CGAACCAAGATGGTCACCGACTACATCGAGAACGTCATGTGGCGCATCACTCC 1928 Query 16408 GGATGAGCG 16416 |||||||| Sbjct 1929 AGATGAGCG 1937 Score = 188 bits (208), Expect = 3e-43 Identities = 212/284 (75%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 15365 CAGTCCGGGTGGCTGGAGTTCATCAACAACGGGCTGTCGTTAAACCCGGATATCCGGGCA 15424 ||||| |||||| |||| ||| ||||||||||| ||||| ||||| || ||||| ||| Sbjct 894 CAGTCGGGGTGGATGGAAGCCATTAACAACGGGCTCTCGTTGAACCCCGACATCCGTGCA 953 Query 15425 TGGTTCGGCACCGTTCTGCAAGCCCTGTCGCGGGACGGGCTGTCGGTCCAGGCGTTCACC 15484 |||||||||||| | |||||||||||| || || || |||||| | || | ||| | Sbjct 954 TGGTTCGGCACCATCCTGCAAGCCCTGGACCGCGATGGCCTGTCGATTAAGACCTTCGCG 1013 Query 15485 CGCATGCTGCGCACACCAGTGTATGTGTCACGCACCAATCCGTTGTTGGACACGTCTCCG 15544 |||||||| ||||| ||| |||||| || ||||| ||||| ||||||| || ||| Sbjct 1014 CGCATGCTACGCACGCCAACGTATGTCAAGCGAACCAACCCGTTCCTGGACACATCCCCG 1073 Query 15545 ATGGTGGCGCGGACAGTGCGGATGGAAACAGTGCAGGCCGTCATCAAGGACGTTACCCAG 15604 || || ||| || || ||||| || || | || |||||||| || || | Sbjct 1074 TTGTGTGCCAAGACCGTCCGCATGGAGACCGTTGGCTCGGTAATCAAGGATGTCACGCGA 1133 Query 15605 TCGTACGGTGTGGATACCCGCATGGATTTGTGGCTGCCGGGTGA 15648 | |||||||| |||||||| |||||| |||||| ||| || || Sbjct 1134 GCCTACGGTGTAGATACCCGTATGGATCTGTGGCGGCCCGGGGA 1177 Score = 141 bits (156), Expect = 4e-29 Identities = 234/338 (69%), Gaps = 0/338 (0%) Strand=Plus/Plus Query 14963 TGCGACAAGTTTTGGCAGCCGATGGGCGCTGTCGGTGGCGACCTGATCGAGGCGTCGGGT 15022 |||| |||||| ||| || ||||| |||| ||| || || ||||||||||| Sbjct 479 TGCGGCAAGTTCTGGACACCCATGGGGTTAATCGGCAACGAACTCATGGAGGCGTCGGGG 538 Query 15023 GCTGACCCGCGCAACGATGTTGAAACCGGCCGGATCGTCCTCAAAGGGAACAGCCCTCTC 15082 | || || || || || |||| ||||||| | ||| || | ||||||||| Sbjct 539 ACCGATCCCCGTAATGACTGCCCTACCGCCCGGATCAAGCACAAGGGTGATAGCCCTCTC 598 Query 15083 ATCCCTTTGTTCATGGACTGCAAAAAGACGATGGTCGGTGTCATCGTCGAGACAGCCGGT 15142 | | |||||||||||||| || |||||||| || | || ||||| || || Sbjct 599 GTGCAGATGTTCATGGACTGCCGGAACACGATGGTGGGCATTGAGGTAGAGACCGCGGGG 658 Query 15143 TTGCGGTATGCGTTCTACACGAAGAACCACACCTACGAGTACCGCGACAGCGCATGGACC 15202 ||||| | |||||| || || ||| || ||||||| ||| |||| ||||| Sbjct 659 CTGCGGCAGAACTTCTACGTCAAAAAGCACGACTGGGAGTACCAAGACGGCGCTTGGACG 718 Query 15203 GGCACCGCTGAACTTCGCGGTATCCGCGACATCCTCAATTACTACGTGATTTGGCCGTCG 15262 || || | ||| || |||||| | ||||| ||||| || |||||||| |||||||| Sbjct 719 GGAACTGTTGAGGCCCGGGGTATCTGGGACATACTCAACTATTACGTGATATGGCCGTCA 778 Query 15263 TGGTGGCTGCCGATTCAGGCACAGCCGTTCTCGCACGC 15300 |||||||| || ||||| | |||||| || ||||| Sbjct 779 TGGTGGCTACCCCCACAGGCCCCGCCGTTTTCTCACGC 816 Score = 84.2 bits (92), Expect = 8e-12 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 14529 GCATTCACTGACCAGATCGGGTCGCTGTTCGGGATTGTTCCCCCGCAGGGCAATTTCTAC 14588 || ||| ||| |||||| |||| | ||||| || ||| ||||| || ||| | ||| Sbjct 90 GCGTTCGGTGATCAGATCAAGTCGTTCTTCGGCATCCGTCCACCGCAAGGGAATCTGTAC 149 Query 14589 AAGTACCTGTCGGGCCGGTTCAGTGAGAACGCGGCGATCCCCGCGAAGTCACCCGGCGA 14647 |||||||| |||||||||| |||| ||||||||||| |||| || |||||||| Sbjct 150 AAGTACCTCAAGGGCCGGTTCTCCCAGAATGCGGCGATCCCACCGAAATCGCCCGGCGA 208 >seq38559 Length=768 Score = 300 bits (332), Expect = 6e-77 Identities = 290/370 (78%), Gaps = 2/370 (1%) Strand=Plus/Plus Query 16030 AATCGACTCGCTGATGATCGTTGTTGGATTCACCGGCATACCGTCCGATCTGCTGTCGGG 16089 |||||| ||||||||||||| || || ||| |||| || || || || ||||| || || Sbjct 388 AATCGATGCGCTGATGATCGTGGTCGGGTTCTCCGGTATCCCATCAGACCTGCTATCCGG 447 Query 16090 TTTCCTGAACAACAGCTTCCTGGCGTTCCAGTTGATTCAGCATTACGACCGCCGTGATGA 16149 ||||||||||||||||||||||| |||||| | || ||||| |||||||| || || || Sbjct 448 CTTCCTGAACAACAGCTTCCTGGCCTTCCAGCTCATGCAGCACTACGACCGACGCGACGA 507 Query 16150 TGTCGGCCCGTACCATCCGGCGATCGAGCGGTTCTATCCGACAGCCTCAGCGCCGTACAA 16209 |||||||| ||||| || ||| ||||||| |||||||| || || ||||| || ||||| Sbjct 508 AGTCGGCCCCTACCACCCAGCGGTCGAGCGCTTCTATCCCACCGCATCAGCCCCCTACAA 567 Query 16210 CATCGAAACGGTGTTCGCATTCATCAACGCCTTGTTTGATTCGCAGGGCAAGACGACGGC 16269 ||||||||| || ||||| |||||||||||| | |||||||| |||||| | || || || Sbjct 568 CATCGAAACAGTATTCGCGTTCATCAACGCCCTCTTTGATTCACAGGGCTACACCACCGC 627 Query 16270 GACGGTGCAGTTCCGCAACGGTGCCCAGTATGCGTTGGGTCGGGACGTTTTTCGCGGCGG 16329 || ||||||||| |||| ||| || || ||||| | |||||||| ||||| Sbjct 628 ACAAGTCACGTTCCGCAATGGTGACCAATACGCCTTGGGAAGAGACGTTTTCAAGGGCGG 687 Query 16330 CCTGATGTCGCTGGTGT-TCATGTCACGTACCCGAATGGTGACTGACTACATCGAGAACG 16388 |||||||| | || | || | | || ||| ||||| || |||||| ||||||||| Sbjct 688 ATTGATGTCGGTCGTCTACCACGGC-CGAACCAAGATGGTCACCGACTACCTCGAGAACG 746 Query 16389 TGATGTGGCG 16398 | |||||||| Sbjct 747 TCATGTGGCG 756 Score = 136 bits (150), Expect = 2e-27 Identities = 194/273 (71%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 15641 CCGGGTGATCCGCAACCGGACAGGTGGGCGAACCTGGACCAGCCGACGTACGTGTTCTCC 15700 || |||||| ||| || || |||| | ||| || || || || || || || || Sbjct 1 CCCGGTGATGAGCAGCCCGATCAGTGGATCACCCTCGATCAACCCACATATGTCTTTTCG 60 Query 15701 ACCGTCGACCGATCACAGGTTTCTGGGCCGACGAAAACCGTGCTCGATTCGGTGCTGCGC 15760 || |||||||| || | || || || ||||| || || |||||||| |||| Sbjct 61 ACTGTCGACCGCAGCCAAATCGAAGGCCCCACAAAAACTGTCCTTGATTCGGTCTTGCGG 120 Query 15761 ACCACGATTGACCTTGGCGGGTCGCTGGGGGACATCTTCAAACCGGTCATCAAGCAGGTT 15820 || | ||||| || || ||||| || | |||||||| |||||||| ||||| || Sbjct 121 ACGGTAGTGGACCTGGGTGGATCGCTCGGCGGGATCTTCAAGCCGGTCATGAAGCAAGTC 180 Query 15821 CCCGGCATGGACGGCGTGTTTTATGCGCCCGCGTTGGGTGTGGATTTCGAGCAGCCATAC 15880 |||||||||||||| ||||| || ||||| | |||||| | |||||||| || ||| Sbjct 181 CCCGGCATGGACGGGGTGTTCTACGCGCCGCTACTCGGTGTGAACTTCGAGCAACCCTAC 240 Query 15881 GCCTATTTCGTGGCCCCCGAGCCGGGTGAGGAC 15913 |||||| | || || || || | ||||||||| Sbjct 241 GCCTATCTTGTTGCGCCAGAATCCGGTGAGGAC 273 >seq45035 Length=256 Score = 107 bits (118), Expect = 7e-19 Identities = 119/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 14334 TATGACGGTCCCGGCGCGGATGAGTATGTGGAGTTTGGTCCGCTGCTGCCCAATCAGATT 14393 || ||||| |||||| |||| | ||||| || || || |||||||| ||||||||| | Sbjct 59 TACGACGGGCCCGGCTCGGACCAATATGTCGAATTCGGGCCGCTGCTACCCAATCAGGTG 118 Query 14394 GTGTTCCTACGTACCGACCCGCGCTCACAGACGACGTTGGTGCAGGATTTGACGTCGGTG 14453 ||||| | || ||||| |||||| || || || |||||| | || | || |||||| Sbjct 119 GTGTTTTTGCGCACCGATCCGCGCGTGCACACCACCTTGGTGAAAGACCTAACCTCGGTG 178 Query 14454 CCGCCGTCGCCGCAGGAGTTGAACATTTTCCAGCAGGCG 14492 ||||| || |||||||| | | | |||||| ||||| Sbjct 179 CCGCCCTCACCGCAGGAACTCGATTTGTTCCAGGAGGCG 217 >seq45817 Length=532 Score = 98.7 bits (108), Expect = 4e-16 Identities = 87/109 (80%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 36387 CATCGTGTCCGAGTCGGGCATGTACGAGGTCGTCATCCGCTCCGACAAGCCAGAGGCCGT 36446 |||||||||||| |||||||||||||||||||||| ||||| |||||||| ||||| || Sbjct 109 CATCGTGTCCGAAGCGGGCATGTACGAGGTCGTCATACGCTCGGACAAGCCCGAGGCTGT 50 Query 36447 CAAGTTCCGCCGCTGGATCACCGGCGAGGTGCTGCCTGCAATCCGCAAG 36495 | ||||||| || | | || || ||| ||||| | ||||| ||| Sbjct 49 CGAGTTCCGGCGTTTCGTTACGGGTACGGTTCTGCCCTCCATCCGAAAG 1 >seq42881 Length=1721 Score = 93.3 bits (102), Expect = 2e-14 Identities = 147/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 11656 TGGGGCAGATCGGTGCCCAGCTTGATCAGGATTTCGGTATCTCGAAGGGTTTGGCGGGGA 11715 ||||| |||| || ||| |||| ||| || ||||| ||| ||||| | | || Sbjct 1488 TGGGGGAGATTGGCGCCAAGCTGGATGCCGACTTCGGCGCCTCCAAGGGCCTCGGTGGAC 1547 Query 11716 TCGCGGAGAACATCACGAAGTTCGTGGCGAACCTTGCCGCGGCCCCGTTGTTGGGGCAGT 11775 | || ||||| | ||||||||||| ||||| || || || ||| || | |||||| Sbjct 1548 TTGCCGAGAATCTAACGAAGTTCGTCGCGAATCTCGCGTTCGCGCCGATGCTTGGGCAGC 1607 Query 11776 TGCAG-GCCATTTCGGCGTATAGCCCGACGCAGGGTGGGCACGGGTTGATGGGTGTCCTC 11834 | ||| || || || | ||| | |||| || ||||| ||||||| ||||| Sbjct 1608 T-CAGCGCTATAAGCGCCGCCAACCCCTCCAAGGGCGGATACGGGATGATGGGCATCCTC 1666 Query 11835 GGTGCGCAGGGTGTGTTCGGGCCGCAGT 11862 || ||||||||||| ||||||||||||| Sbjct 1667 GGGGCGCAGGGTGTATTCGGGCCGCAGT 1694 >seq43497 Length=1050 Score = 82.4 bits (90), Expect = 3e-11 Identities = 181/269 (67%), Gaps = 18/269 (7%) Strand=Plus/Plus Query 17392 GTTTTCGGTTGAGGTTCTTCCGCTGTCATGACGTCATCGTTTGATCCGTTGCCGGAGTGG 17451 ||||| || ||||||||| ||||||| | ||||| | | || || ||| Sbjct 3 GTTTTGGGCTGAGGTTCTGCCGCTGTGA------CATCGGG------GATTCCCGAATGG 50 Query 17452 GCTCATGCGGTGCCGTCTGAGCCGGGTATTCACCCGGAACAGTCGGCGTTGCAGTGGCAG 17511 || || ||| | ||||||| || | | || | ||| ||| | | || || || Sbjct 51 GCGCAGGCGATCCCGTCTGCCCCAG---TCCATCAGGAGCAGCC--CAATGAGCTGACA- 104 Query 17512 CGTCCGTTCACTGTTCAGCAGCTGCTTGAGATTGGTGAGCAGTTCATCGAGCAGTTTTTG 17571 || |||||||| | |||||||| ||||| | ||||| ||| ||||||||||||| || Sbjct 105 CGGCCGTTCACGGCGCAGCAGCTCATTGAGTTCGGTGAACAGCTCATCGAGCAGTTCCTG 164 Query 17572 GCGTGGGTGGTGCGCGCGGTCGCTGGGGTGTTCATCCCTGGTGAGGCGTCGTTCGACCAG 17631 | | || || | || || | || |||||||| ||||| | |||||||| ||| Sbjct 165 CGGCGCGTAGTCCTGGCCGTGGTCGGCTCATTCATCCCCGGTGAAGGCTCGTTCGAGCAG 224 Query 17632 TTGCGTGATTGGGCTTTGAACATCCCCAT 17660 || || ||||| | | ||||||||| Sbjct 225 CTGGAGGAATGGGCATACAGCATCCCCAT 253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189895089527000