Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq398 199 3e-46 seq579 196 4e-45 seq46569 170 2e-37 seq516 165 7e-36 seq44019 161 8e-35 seq331 158 1e-33 seq97 122 7e-23 seq396 89.7 4e-13 seq388 82.4 6e-11 >seq398 Length=3125954 Score = 199 bits (220), Expect = 3e-46 Identities = 376/548 (69%), Gaps = 9/548 (2%) Strand=Plus/Plus Query 2140 CTAAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTGCCA 2199 ||| |||| || | ||||| || | || |||||||| || || || || | |||| Sbjct 2057111 CTAGACTGCATCGTCGCTGTGTCCCAGAACATGGGCATCGGCAAGAACGGGGACTTGCCC 2057170 Query 2200 TGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATGAC---ATCTTCTTCCACT 2256 ||||||| || | ||||||||||| |||| || | |||||| | ||||||| Sbjct 2057171 TGGCCTCTGCTCAGGAATGAATTTAAGTATTTCCAGAGAATGACCATAACTTCTTCAGTA 2057230 Query 2257 GACTTAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAA 2316 || ||||| ||| | || |||||||| || ||||| |||||||| |||| | ||| Sbjct 2057231 GAAGGTAAACAAAATATCGTGATTATGGGTAGGAAGACCTGGTTTTCCATTCC--TGAAA 2057288 Query 2317 AGCA--GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCAC 2374 || | ||||||| || ||||||| ||| | ||| |||||||| | || || || || | Sbjct 2057289 AGAATCGGCCTTTAAAAGACAGAATTAATTTTGTTTTCAGTAGAGAACTCAAGGAACCTC 2057348 Query 2375 CACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAATAGGAC 2434 |||| || ||||||||| |||| || ||| | ||| | || || || |||| || Sbjct 2057349 CACGAGGAGCTCACTTTCTTGCCAAGAGTCTGGATGATGCCCTAAAACTTATTGAGCAAC 2057408 Query 2435 CAGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGG 2494 |||||||| | ||||| | | |||||||| | || || | ||||| ||| || Sbjct 2057409 CAGAATTAGTTAATCAAGTGGACATGGTTTGGATAGTGGGAGGTTGTTCTGTTTATAAGA 2057468 Query 2495 AGAGCAT-TACAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATTT 2553 | ||| || || | || | | | ||||| | |||||||| |||| | ||| Sbjct 2057469 AAGCCATGAACCAG-CCAGGCCATCTTACACTGTTCGTGACAAGGATCATGCAGGATTTT 2057527 Query 2554 GAATGTGATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATTT 2613 ||| ||||||| | || ||||||||| || | ||||| |||| || | |||| Sbjct 2057528 GAAAGTGATACCTTTTTTCCAGAAATTGATTTGGAGAAATATAAACTTCTCCCAGAATAC 2057587 Query 2614 CCAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATATAT 2673 |||||||||| |||| | || || || || || |||| | || | ||| | ||| Sbjct 2057588 CCAGGTGTTCTTTCTGATATCCAGGAGGAGAAAGGCATTAAGGATAAGTCTGAAGTGTAT 2057647 Query 2674 Gaaaaaaa 2681 ||||| || Sbjct 2057648 GAAAAGAA 2057655 >seq579 Length=4107578 Score = 196 bits (216), Expect = 4e-45 Identities = 368/533 (69%), Gaps = 11/533 (2%) Strand=Plus/Plus Query 2155 GCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTGCCATGGCCTCCTCTTAAA 2214 ||||| || | || |||||||| || || || | | |||| |||||||| || | Sbjct 165277 GCTGTGTCCCAGAACATGGGCATCGGCAAGAACCGGGACTTGCCCTGGCCTCCGCTCAGG 165336 Query 2215 AATGAATTTAAACATTTTCAAAAAATGAC---ATCTTCTTCCACTGACTTAAAACAGAAT 2271 |||||| |||| |||| || | |||||| | | ||||| || ||||| ||| Sbjct 165337 AATGAACTTAATTATTTCCAGAGAATGACCACAACCTCTTCAGTAGAAGGTAAACAAAAT 165396 Query 2272 GTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAAAGCA--GGCCTTTGA 2329 | || |||||||| || ||||| |||||||| |||| | ||||| | ||||||| | Sbjct 165397 ATCGTGATTATGGGTAGGAAGACCTGGTTTTCCATTCC--TGAAAAGAATCGGCCTTTAA 165454 Query 2330 ACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCACCACGTGGGGCTCACT 2389 | ||||||| ||| || ||||||||||| | || || || || ||||| || ||||||| Sbjct 165455 AAGACAGAATTAATTTG-TTCTCAGTAGAGAACTCAAGGAACCTCCACGAGGAGCTCACT 165513 Query 2390 TTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAATAGGACCAGAATTAAAAGACA 2449 || |||| || ||| | ||| | || || || |||| |||||||||| | Sbjct 165514 TTCTTGCCAAGAGTCTGGATGATGCCCTAAAACTTATTGAGCAACCAGAATTAGCTAATC 165573 Query 2450 GGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGGAGAGCAT-TACAAGA 2508 ||||| | | |||||||| | || || | ||||| ||| |||| ||| || || Sbjct 165574 AAGTGGACATGGTTTGGATAGTGGGAGGTTGTTCTGTTTATAAGGAAGCCATGAACCAG- 165632 Query 2509 TCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATTTGAATGTGATACATAC 2568 | || | | | ||||| | |||||||| |||| | |||||| ||||||| | Sbjct 165633 CCAGGCCATCTTAAACTGTTCGTGACAAGGATCATGCAGGATTTTGAAAGTGATACCTTT 165692 Query 2569 TTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATTTCCAGGTGTTCCCTCT 2628 || ||||||||| || | ||||| |||| || | |||| |||||||||| |||| Sbjct 165693 TTTCCAGAAATTGATTTGGAGAAATATAAACTTCTCCCAGAATACCCAGGTGTTCTCTCT 165752 Query 2629 GCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATATATGaaaaaaa 2681 | || | || || || || |||| || || | ||| | |||||||| || Sbjct 165753 GATGT-AAGGAGGAGAAAGGCATTAAGTATAAGTCTGAAGTGTATGAAAAGAA 165804 >seq46569 Length=4817335 Score = 170 bits (188), Expect = 2e-37 Identities = 372/545 (68%), Gaps = 13/545 (2%) Strand=Plus/Plus Query 2140 CTAAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTGCCA 2199 ||| |||| || | ||| | || | || |||||||| || || || || | ||||| Sbjct 4565343 CTAGACTGCATCGTCGCTATGTCCCAGAA-ATGGGCATCGGCAAGAACGGGGACCTGCCC 4565401 Query 2200 TGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATGACATCTTCTTC--CACT- 2256 |||||||| || | ||||||||||| |||| || | || ||| || | || || | Sbjct 4565402 TGGCCTCCACTCAGGAATGAATTTAAGTATTTCCAGAGAACGACCACTACCTCTTCAGTA 4565461 Query 2257 GACTTAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAA 2316 || ||||| ||| || |||||||| || ||||| |||||||| |||| | ||| Sbjct 4565462 GAAGGTAAACAAAATACCGTGATTATGGGTAGGAAGACCTGGTTTTCCATTCC--TGAAA 4565519 Query 2317 AGCA--GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCAC 2374 || | ||||||| || | ||||| ||| | |||||||||||| | || || || || | Sbjct 4565520 AGAATCGGCCTTTAAAGGATAGAATTAATTTAGTTCTCAGTAGAGAACTCAAGGAACCTC 4565579 Query 2375 CACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAATAGGA- 2433 |||| || ||||| ||| |||| |||||| | ||| | || || || |||| || | Sbjct 4565580 CACGAGGAGCTCATTTTCTTGCCAAAAGTCTGGATGATGCCCTAAAACTTAT-TGAGCAG 4565638 Query 2434 CCAGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAG 2493 || |||||| | ||||| | | |||||||| || || | ||||| ||| || Sbjct 4565639 CCTGAATTAGCTAATCAAGTGGACATGGTTTGGATAGCAGGAGGTGGTTCTGTTTATAAG 4565698 Query 2494 GAGAGCAT-TACAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATT 2552 || ||| || || | || | | | | ||| | |||||||| |||| | || Sbjct 4565699 GAAGCCATGAACCAG-CCAGGCCATCTTAAACCGTTCGTGACAAGGATCATGCAGGATTT 4565757 Query 2553 TGAATGTGATA-CATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAAT 2611 |||| ||||| | | || ||||||||| || | ||||| |||| || | | || Sbjct 4565758 TGAAAATGATACCTTTTTTTCCAGAAATTGATTTGGAGAAATATAAACTTCTCCCAGGAT 4565817 Query 2612 TTCCAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATAT 2671 |||||||||| |||| || || || || || || |||| || || ||||| | | Sbjct 4565818 ACCCAGGTGTTCTTTCTGATGTCCAGGAGGAGAAAGGCATTAAGTATAAGTTTGAAGTGT 4565877 Query 2672 ATGaa 2676 ||||| Sbjct 4565878 ATGAA 4565882 Score = 132 bits (146), Expect = 4e-26 Identities = 206/292 (71%), Gaps = 7/292 (2%) Strand=Plus/Minus Query 2140 CTAAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTGCCA 2199 |||||||| | | |||| || | || |||||||| || || || || | ||||| Sbjct 4192164 CTAAACTGCGTCGTCACTGTGTCCCAGAACATGGGCATCGGCAAGAATGGGGACCTGCCC 4192105 Query 2200 TGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATGACATC---TTCTTCCACT 2256 ||||||| || | ||||||||||| |||| || | |||||| | |||||| Sbjct 4192104 TGGCCTCTGCTCAGGAATGAATTTAAGTATTTCCAGAGAATGACCACAATTTCTTCAGTA 4192045 Query 2257 GACTTAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAA 2316 || ||||| ||| || |||||||| || ||||| || ||||| |||| | ||| Sbjct 4192044 GAAGGTAAACAAAATACCGTGATTATGGGTAGGAAGACCTGATTTTCCATTCC--TGAAA 4191987 Query 2317 AGCAG--GCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCAC 2374 || | |||||| || | ||||| ||| | |||||||||||| | || || || || | Sbjct 4191986 AGAATCAGCCTTTAAAGGATAGAATTAATTTAGTTCTCAGTAGAGAACTCAAGGAACCTC 4191927 Query 2375 CACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTAT 2426 |||| || ||||| ||| |||| |||||| | ||| | || || || |||| Sbjct 4191926 CACGAGGAGCTCATTTTCTTGCCAAAAGTCTGGATGATGCCCTAAAACTTAT 4191875 >seq516 Length=4095636 Score = 165 bits (182), Expect = 7e-36 Identities = 229/318 (72%), Gaps = 2/318 (1%) Strand=Plus/Minus Query 1209 GTTGTAACCCAGGATGAAGCAACACCACTTGGAGACCCCGTTTCTATTAAG-TGTTTTTT 1267 || || |||||||||||| | |||||| | | || || | | ||||| |||| | | Sbjct 1045225 GTGGTGACCCAGGATGAAAGAGAACCACT-GAACACACCTGCTTTCTTAAGATGTTCTCT 1045167 Query 1268 AGAAACGCCACAAGAAGTTGTCATTGTAACATGGCAAAAAGTTAAAGCATCAAGCCCAGA 1327 ||| | || ||||| | | ||| |||||||| ||| || || |||||||| Sbjct 1045166 GCAAAGTTCCCAGGAAGTCTTAAGTGTGACATGGCAGAAAAAGAAGGCTGTCAGCCCAGA 1045107 Query 1328 AAACATGGCCACTTTTAGTAATGACCACGGGGTTGTTGTTCAGCCAGCATACAAAGATAA 1387 |||||||| ||| || || || |||| || ||||| | ||||| || || || || | Sbjct 1045106 AAACATGGTCACCTTCAGCAAGAACCATGGTGTTGTGATCCAGCCTGCCTATAAGGACAG 1045047 Query 1388 AATGAACATAACTGAGCTTGGACTACAAAACACAACTATAACCTTCTGGAACACAACATT 1447 ||| || || || ||||| ||||| |||||| | || || ||||||||||| || || | Sbjct 1045046 AATCAATATCACCGAGCTGGGACTCCAAAACTCGACCATCACCTTCTGGAATACCACCCT 1044987 Query 1448 GGATGATGAAGGGTGCTACAAGTGTTTATTTAACACTTTTGGATCTGGGAAGATGTCAGG 1507 ||| ||||| ||||| |||| |||| | || || || ||||| ||||| ||||| || || Sbjct 1044986 GGAAGATGAGGGGTGTTACATGTGTCTCTTCAATACCTTTGGTTCTGGAAAGATCTCGGG 1044927 Query 1508 AATAGGGTGTCTAACCCT 1525 || | || || ||||| Sbjct 1044926 AACATCCTGCCTCACCCT 1044909 >seq44019 Length=1131195 Score = 161 bits (178), Expect = 8e-35 Identities = 343/506 (68%), Gaps = 12/506 (2%) Strand=Plus/Plus Query 2182 AACAAGGGAAAACTGCCATGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATG 2241 ||||||| | || || ||||||| || | ||||||||||| |||| || | |||| Sbjct 313015 AACAAGG---ACCTACCCTGGCCTCGGCTCAGGAATGAATTTAAGTATTTCCAGAGAATG 313071 Query 2242 AC---ATCTTCTTCCACTGACTTAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGG 2298 || | | ||||| | || ||||||||| | | |||||||| || ||||| ||| Sbjct 313072 ACCACAACCTCTTCAGCAGAAGGTAAACAGAATATCATGATTATGGGTAGGAAGACCTGG 313131 Query 2299 TTTTCACTTCCCATTAAAAGCAG--GCCTTTGAACAACAGAATAAATCTGGTTCTCAGTA 2356 || || |||| | ||||| | |||||| || | ||||| ||| | ||||| |||| Sbjct 313132 TTGTCCATTCC--TGAAAAGAATCAGCCTTTAAAGGATAGAATTAATTTAGTTCTTAGTA 313189 Query 2357 GACACCTTAAAGAGCCACCACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTC 2416 || | || || || || |||| || ||||| ||| |||| |||||| | ||| | || | Sbjct 313190 GAGAACTCAAGGAACCTCCACCAGGAGCTCATTTTCTTGCCAAAAGTCTGGATGATGCCC 313249 Query 2417 TGGAAATTATAATAGGACCAGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTG 2476 | || |||| ||||||||||| | ||||| | | | ||| || | || | Sbjct 313250 TAAAACTTATTGAGCAACCAGAATTAACTAATCAAGTGGACATGGTCTGGCTAGTGGGAG 313309 Query 2477 GAAGATCTGTCTATGAGGAGAGCAT-TACAAGATCTTGCAAACAGATGCTGTTTTTAACA 2535 | || |||| ||| |||| ||| || || | || | | | ||||| | ||| Sbjct 313310 GTAGTCCTGTTTATAAGGAAGTCATGAACCAG-CCAGGCCATCTTAAACTGTTCATGACA 313368 Query 2536 AGGATTCTGCAAAAATTTGAATGTGATACATACTTCCCAGAAATTAATCTTACCAAATAC 2595 ||||| |||| | |||||| ||||||| | || | ||||||| || | ||||| Sbjct 313369 AGGATCTTGCAGGATTTTGAAAGTGATACCTTTTTTCAAGAAATTGATTTGGAGAAATAT 313428 Query 2596 AAACAACTTACTGAATTTCCAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGA 2655 |||| || | | || |||||||| | |||| || || || || || || |||| Sbjct 313429 AAACTTCTCCCAGGATACCCAGGTGTACTTTCTGATGTCCAGGAGGAGAAAGGCATTAAG 313488 Query 2656 TACAAATTTGAGATATATGaaaaaaa 2681 || || ||||| | |||||||| || Sbjct 313489 TATAAGTTTGAAGTGTATGAAAAGAA 313514 >seq331 Length=8612728 Score = 158 bits (174), Expect = 1e-33 Identities = 344/506 (68%), Gaps = 13/506 (3%) Strand=Plus/Plus Query 2170 ATGGGCATTGGAAACAAGGGAAAACTGCCATGGCCTCCTCTTAAAAATGAATTTAAACAT 2229 |||||||| || || || | | ||||| |||| ||| || | ||||||||||| ||| Sbjct 8191741 ATGGGCATAGGCAAGAACAGGGACCTGCCCTGGCTTCCGCTCAGGAATGAATTTAAGCAT 8191800 Query 2230 TTTCAAAAAATGACATCTTCT--TCCACT-GACTTAAAACAGAATGTTGTAATTATGGGA 2286 || || | ||||| | | | || | || ||||||||| | || | |||||| Sbjct 8191801 TTCCAGAGGATGACCACCACCGGTACAGTAGAAGGTAAACAGAATATCGTGACTATGGGG 8191860 Query 2287 AGAAAGACATGGTTTTCACTTCCCATTAAAAGCA--GGCCTTTGAACAACAGAATAAATC 2344 || ||| |||||||| |||| | ||||| | ||||||| || | ||||| ||| Sbjct 8191861 AGGAAGGTCTGGTTTTCCATTCC--TGAAAAGAATCGGCCTTTAAAGGATAGAATTAATT 8191918 Query 2345 TGGTTCTCAGTAGACACCTTAAAGAGCCACCACGTGGGGCTCACTTTGTTGCAAAAAGTA 2404 | |||||||||||| | || || || | | || | ||||| ||| |||| ||||| Sbjct 8191919 TAGTTCTCAGTAGAGAACTCAAGGAACTGCTACAAAGAGCTCATTTTCTTGCCGAAAGTC 8191978 Query 2405 TAGATCACGCTCTGGAAATTATAATAGGACCAGAATTAAAAGACAGGGTGGATAAGATTT 2464 | ||| | || | || |||| | |||||||||| | ||||| | | ||| Sbjct 8191979 TGGATGATGCCCCAAAACTTATTAAGCAACCAGAATTAGCTAATCAAGTGGACATGGTTT 8192038 Query 2465 GGATAATTGGTGGAAGATCTGTCTATGAGGAGAGCAT-TACAAGATCTTGCAAACAGATG 2523 ||||| | || || || ||||| ||| |||| ||| || || | || | | | Sbjct 8192039 GGATAGTGGGAGGTAGTTCTGTTTATAAGGAAGTCATGAACCAG-CCAGGCCATCTTAAA 8192097 Query 2524 CTGTTTTTAACAAGGATTCTGCAAAAATTTGAATGTGATACATACTTCCCAGAAATTAAT 2583 ||||| | || ||||| || | | |||||| ||||||||| || ||||||||| || Sbjct 8192098 CTGTTCATGACGAGGATCATGTAGGATTTTGAAAGTGATACATTTTTTCCAGAAATTGAT 8192157 Query 2584 CTTACCAAATACAAACAACTTACTGAATTTCCAGGTGTTCCCTCTGCCGTGCA--AGAAG 2641 | |||||||||| || | |||| ||||||||| |||| || || ||||| Sbjct 8192158 TTGGGGAAATACAAACTTCTCCCAGAATACCCAGGTGTTATTTCTGATGTCCAGGAGAAG 8192217 Query 2642 AAAATGGAATTAGATACAAATTTGAG 2667 ||| || |||| || ||||||||| Sbjct 8192218 AAA--GGCATTAAGTATAAATTTGAG 8192241 >seq97 Length=5233208 Score = 122 bits (134), Expect = 7e-23 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304 || || || ||||||||| | |||||||| ||||||||| | ||||| || ||||||||| Sbjct 4184419 GTGGTGGAGGAGCTCTTCAGGGATGGGGTGAACTGGGGGAGGATTGTGGCCTTCTTTGAG 4184478 Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364 || ||||| || ||||||||||| |||||||| | | || | |||| || |||||| Sbjct 4184479 TTCGGTGGGGTCATGTGTGTGGAGAGCGTCAACCGGGAGATGTCGCCCCTGGTGGACAAC 4184538 Query 3365 ATTGCCGCGTGGATGACAGA 3384 || ||| ||||||||| || Sbjct 4184539 ATCGCCCTGTGGATGACTGA 4184558 >seq396 Length=2188450 Score = 89.7 bits (98), Expect = 4e-13 Identities = 141/199 (71%), Gaps = 5/199 (3%) Strand=Plus/Minus Query 2215 AATGAATTTAAACATTTTCAAAAAATG---ACATCTTCTTCCACTGACTTAAAACAGAAT 2271 |||||||| || |||| || | |||| ||| | ||||| | || ||||||||| Sbjct 682003 AATGAATTCAAGTATTTCCAGAGAATGGCCACAACCTCTTCAATAGAAGGTAAACAGAAT 681944 Query 2272 GTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAA-AAGCAGGCCTTTGAA 2330 | || |||||||| || |||| || ||||| ||||| || || || | ||| || Sbjct 681943 ATGGTGATTATGGGTAGGGAGACCTGATTTTCCATTCCCCAAAAGAATCAA-CTTTTAAA 681885 Query 2331 CAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCACCACGTGGGGCTCACTT 2390 ||||||| ||| | |||||||||||| | || || ||||| | || || |||| || Sbjct 681884 GGACAGAATTAATTTAGTTCTCAGTAGAGAACTCAAGGAGCCTCTACAAGGAACTCATTT 681825 Query 2391 TGTTGCAAAAAGTATAGAT 2409 | |||| ||||| | ||| Sbjct 681824 TCTTGCCCAAAGTTTGGAT 681806 >seq388 Length=3990105 Score = 82.4 bits (90), Expect = 6e-11 Identities = 116/163 (71%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 118532 TAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAG 118591 |||| ||||| | ||| |||||||| || || | || |||||||| | || || | Sbjct 2997474 TAAGGCCTGTGATGTGTGCAATCATATACGTGAGCAGGGCATAGCTGGCAATGTTGAAGG 2997415 Query 118592 GAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTG 118651 | || ||||| ||||||||| |||| |||||||| | ||||| || ||||| || | Sbjct 2997414 GCACGCCCAGGCCCATGTCTCCTGACCTCTGGTAGAGCTGGCAGGACAGCTCACCATCCA 2997355 Query 118652 CAACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCAT 118694 | || || ||||| | | || ||||||||||| |||| Sbjct 2997354 CCACGTAGAACTGGCAGAGCGCATGGCATGGAGGCAGCGCCAT 2997312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414220439623000