Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_030696.1 Length=93139 Score E Sequences producing significant alignments: (Bits) Value seq46163 109 3e-19 >seq46163 Length=1271 Score = 109 bits (120), Expect = 3e-19 Identities = 150/206 (73%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 32637 TGGGGATGGTCGGCCACCAACGACGT-CGCGAGCTCAAACCACCTGTCTGGCACTGCGGT 32695 ||||| ||||| ||||| ||||| || ||| | | || |||||| | ||||| || || Sbjct 928 TGGGGGTGGTCTGCCACTAACGATGTTCGCCAACAGTAATCACCTGGCAGGCACCGCTGT 987 Query 32696 TGACATCAACGCCACTCAGTACCCCTGGGGCTTGCGCACGATGTCGGCGGCT-CGCAAGG 32754 |||| | | || | ||||||||||| | ||||||| || || |||| || Sbjct 988 TGACGTGATGGCACCCAAGTACCCCTGGCAGCGGTACACGATGGATGCCGCCACGCA-GG 1046 Query 32755 CCAAGATCCGCGAGGGCCTAAAGCTTTTCGAGGGCGTGATCTTCTGGGGCGCCGACTGGA 32814 ||||| ||||| ||||||| ||| ||||||||| | | ||||||||| ||||||| Sbjct 1047 CCAAGGTCCGCAAGGGCCTGGCGCTGTTCGAGGGCTCGGTGTTCTGGGGCCGCGACTGGT 1106 Query 32815 GCAGGGCTGACGAGATGCACTACCAG 32840 | | |||||||||||||||||| Sbjct 1107 CGCGCCCCGACGAGATGCACTACCAG 1132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 297735731825000