Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_030942.1 Length=55524 Score E Sequences producing significant alignments: (Bits) Value seq39852 125 3e-24 >seq39852 Length=3441 Score = 125 bits (138), Expect = 3e-24 Identities = 101/122 (83%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 37283 GACCACCATCTGTCGCGGTACGCCTGCTACCTCATCGCCCTCAACGGCGACCCCCGCAAA 37342 ||| |||| || || |||||||||||||| ||| |||| ||||| ||||| || ||||| Sbjct 1327 GACTACCACCTCTCCCGGTACGCCTGCTATCTCGTCGCACTCAATGGCGATCCACGCAAG 1386 Query 37343 CCCGAGATCGCCTCCGCGCAAAACTACTTCGTCATCAAGACCCGCGAAGCCGAGACCGCA 37402 || || ||||| ||||||| | |||||||||||||||||||| || ||||||||||| Sbjct 1387 CCTGAAATCGCAGCCGCGCAGACATACTTCGTCATCAAGACCCGTGAGGCCGAGACCGCC 1446 Query 37403 AC 37404 || Sbjct 1447 AC 1448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 177448195249000