Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_031029.1 Length=93686 Score E Sequences producing significant alignments: (Bits) Value seq46163 109 3e-19 >seq46163 Length=1271 Score = 109 bits (120), Expect = 3e-19 Identities = 150/206 (73%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 33468 TGGGGATGGTCGGCCACCAACGACGT-CGCGAGCTCAAACCACCTGTCTGGCACTGCGGT 33526 ||||| ||||| ||||| ||||| || ||| | | || |||||| | ||||| || || Sbjct 928 TGGGGGTGGTCTGCCACTAACGATGTTCGCCAACAGTAATCACCTGGCAGGCACCGCTGT 987 Query 33527 TGACATCAACGCCACTCAGTACCCCTGGGGCTTGCGCACGATGTCGGCGGCT-CGCAAGG 33585 |||| | | || | ||||||||||| | ||||||| || || |||| || Sbjct 988 TGACGTGATGGCACCCAAGTACCCCTGGCAGCGGTACACGATGGATGCCGCCACGCA-GG 1046 Query 33586 CCAAGATCCGCGAGGGCCTAAAGCTTTTCGAGGGCGTGATCTTCTGGGGCGCCGACTGGA 33645 ||||| ||||| ||||||| ||| ||||||||| | | ||||||||| ||||||| Sbjct 1047 CCAAGGTCCGCAAGGGCCTGGCGCTGTTCGAGGGCTCGGTGTTCTGGGGCCGCGACTGGT 1106 Query 33646 GCAGGGCTGACGAGATGCACTACCAG 33671 | | |||||||||||||||||| Sbjct 1107 CGCGCCCCGACGAGATGCACTACCAG 1132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299485049175250