Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq53 850 0.0 seq48864 336 3e-87 seq805 134 2e-26 seq75 129 8e-25 seq79 123 3e-23 seq44217 93.3 6e-14 seq199 84.2 3e-11 >seq53 Length=2810707 Score = 850 bits (942), Expect = 0.0 Identities = 1492/2150 (69%), Gaps = 43/2150 (2%) Strand=Plus/Minus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 |||||| | |||||| || ||| ||| |||| | || ||| ||||| ||||| || | | Sbjct 1303563 GTAAACAGGATTGGATTAGCTGCTGGTCTTGTCCTTAAATAATACATCCCAGTCTTCAAA 1303504 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 | | |||| || ||||| ||||| || || |||||| ||| |||| || || ||| Sbjct 1303503 TTCTGCTTCCAGCCATAGAAGTGCATACTGGTGAGTTTGCCATAGTTAGGTTCAGCAATA 1303444 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 || ||||||| |||||||||||||| ||||||| |||| | || ||||| || | | Sbjct 1303443 TGGATATTCAAAGACTGACTTTGATCAATGAAAGTATCTCTCTTGGCTGCCATCTTGAGA 1303384 Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021 | || || || | |||||||| ||||| || ||| || || | ||||| | || Sbjct 1303383 ACAGTTTTCTGGGAGATTTCCCACATAGTCTTATAAAGTTCCTTCAGGTCATCAGTAATT 1303324 Query 77022 TTTG-TAT--TTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078 | || ||| | || || || ||| || ||||| ||| || || || |||||| Sbjct 1303323 TCTGGTATGCTCTGGATAGAGCCATTGCATGCAATAATCTGATTTTTCATCTCTTCATTC 1303264 Query 77079 CACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCA 77138 ||||| || ||| || | | || | || | |||||||| || || ||||||||||| Sbjct 1303263 CACAAGCCCCACTCAGTAAGATCTTTCAGTAAGTGAGGATTTACAATCTGAAATTCTCCT 1303204 Query 77139 GACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 77198 ||||| ||||| ||||||| || || |||||||| ||||| | || ||||| || ||| Sbjct 1303203 GACAAGACTCTGTGAGTGTAGATGTTGCTGGTATAAGGTTCAATGGACTCATTATTCCCC 1303144 Query 77199 AAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 77258 || || |||||||| | |||||| | ||| || || | | |||||| ||||| | |||| Sbjct 1303143 AAGATCTGAGCAGTTGCAGCAGTAGTCATTGGGGCAATAAGTAAACTGTTTCTTACACCA 1303084 Query 77259 TGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCC 77318 | || || || || || ||| |||||| ||||| || |||| || ||||| | Sbjct 1303083 TACTTTGCAATCTTGTCCTTGAGAAGTTTCCAGTCCCACAGGTCTGTGGGAGTAACATTC 1303024 Query 77319 CAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGT 77378 || | ||| || || |||||| | || || | || || | ||| ||||| || || Sbjct 1303023 CACACATCATACTGAAGAATTTCTTTGCTTACTGGAGAGCCCTCATAGGTTTCCTATGGA 1302964 Query 77379 CCTT-CTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAA 77437 || | || ||| || || ||||| || |||||||| ||||| |||||||| |||| || Sbjct 1302963 CCATACTCTTTG-GCCAGGTCACAGCTGGCTTCCAAGGCTCCATAATAAATAGTTTGAAA 1302905 Query 77438 AATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAA--AAGAATA 77495 || | |||||| || || | || ||| ||||| ||||| | | | |||| || Sbjct 1302904 GATTTGCTTATTCAGTAACTGGACCTCTGGACTTTCAAATGGATA-TCTCATCAAGA-TA 1302847 Query 77496 AAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATT 77555 || ||||| || | | ||||| ||||| ||||| || ||| | ||||| || | Sbjct 1302846 AAAGCATCAGCCAGAACTTGAACCCCAATTCCAATGGGGTGATGGCGTTTATTTGATACG 1302787 Query 77556 TTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAACT 77615 | || ||||||||||| || || || | | ||||||||||| | |||| ||||| Sbjct 1302786 TATGCCTCTGGAATAGGGTAGTAGTTTCTATTAATAATTTTATTCAAGTTTCGAACAATG 1302727 Query 77616 ACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCT---TCCATCTATAACAAACATG 77672 |||| | || || || || ||| || | | | | | | ||| |||| Sbjct 1302726 ACTTCAGTGACTTCAGCCAGCTTCTTAAAGTCGTACGTGTGTTCTGATGTGACATACATA 1302667 Query 77673 TTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATT 77732 |||| || | || || | ||||||||||| ||||| | | ||| ||| | || | Sbjct 1302666 TTCAGGGCCAGGGAAGCCAAGTTACAAACTGCAACCTCCTCTTTGCTGGTATACTCTACT 1302607 Query 77733 ATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTA 77792 || || || || || || || |||||||| | ||||| || || ||||||||||| | | Sbjct 1302606 ATTTCTGTGCACAGGTTGCTGCATTTGATTGCTCCCAGGTTCTGCTGGTTGCTCTTATGA 1302547 Query 77793 TTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATA 77852 || || || | || || || || | || || | || || |||| || || |||||| Sbjct 1302546 TTACAGGAATTTTTGTAGAGCATGTA-GGGGTGTCAGTCTCTGTCTGAGACTCAATAATA 1302488 Query 77853 GATTTCCAGA-CGACTCTAGCTTTTATCATAGATTTGT--AT-CGCCTCTCTCTTTCATA 77908 | | ||| | | || ||||| ||| | ||||| || | | || | ||||| Sbjct 1302487 GCATACCAAAGCTGCT-GAGCTT---TCACAACTTTGTGAATGTGACCCTGCTTCTCATA 1302432 Query 77909 TTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATT 77968 | ||||||| |||||||| ||||||||||| ||||||| ||||| || ||||| Sbjct 1302431 CTTTTCATATAGCTTCTCAAATTCTTCTCCCCAAACTTCATCCAGGCCAGGACACTCATT 1302372 Query 77969 TGGGCACATCAATGACCAGTC---ACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGG 78025 ||| |||||||| |||||||| | | |||| || | |||||| |||||||| | Sbjct 1302371 TGGACACATCAAAGACCAGTCCTGATTAGTTTCC---ACCCATTTCATGAAGAGATCTGA 1302315 Query 78026 TATCCATAGAGCAATAAATAGAT--CTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTT 78083 ||||| || |||| || |||| |||| | | |||||||| |||||||| ||||| Sbjct 1302314 AATCCAAAGGGCAAAGAAAAGATCCCTCGCATGC--TGTTCTTCCTTTCCTGTGTTCTTC 1302257 Query 78084 TTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACT 78143 || | |||||||||||| | || || ||||| | |||| || || || || | | Sbjct 1302256 TTTAAATCGAGAAACTCAAAGATGTCTAAATGCTAAGGTTTCAGGTAAATAGCAAATGCC 1302197 Query 78144 CCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAAC 78203 ||| | || || || || || ||||||| |||| || || ||| | || ||||||| | Sbjct 1302196 CCAAGACGCTTGTTTCCACCTTGATCTACGTATCGAGCTGTATTACTGTATACTCTCAGC 1302137 Query 78204 ATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGA 78263 ||||| | || || || || | ||||| || |||| || || || ||| | || ||| Sbjct 1302136 ATTGGTACAAGGCCATTGGAATTGCCATTAGTCCCAGCAAGGTAGCTGCCAGTAGCCCGA 1302077 Query 78264 ATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTC 78323 ||| ||| | | | || ||||| || || |||||| || | ||| || | || Sbjct 1302076 ATACAACTCACAGCAACACCAATTCCCCCAGCAGACTTAGAAATCAAAGCACACTGCTTT 1302017 Query 78324 AATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGAC 78383 | ||||| || || || || || |||||||| ||||||| ||||| ||| || |||| Sbjct 1302016 AGAGTATCATAAATCCCTTCAATGCTGTCATCTTTCATGTTCAGAAGGAAATAGGTAGAA 1301957 Query 78384 ATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTT 78443 | || | || || || ||||| || | || ||||| ||||| || ||||| || Sbjct 1301956 AGTTCTGGGCGATTGGTGCCAGCATTGAAGAGAGTGGGAGAGGCATGAGTGAACCACTTC 1301897 Query 78444 TCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACC 78503 |||||||| || || ||||||||||| || | || ||||| || ||||| || || Sbjct 1301896 TCAGAAAGAAGGTTATATGTTTCAATTGCAGCATCAATGTCTTCTTTGTGAATCCCCACA 1301837 Query 78504 GCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAG 78563 | ||| | ||||||||| || || ||||| ||| || || | | || |||||||| Sbjct 1301836 GATACCCTCATCAACATGTGTTGCGGTCTGTCAGCCACTTTCCCACTAATCTTCAACAAA 1301777 Query 78564 TATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATA 78623 || || | ||||| | ||||| |||||||| ||||| ||||| |||| || || || Sbjct 1301776 TAGGACTGCTCCAATGCCTTAAAGCCAAAATAATTGTAAGAAAAATCTCGATCATAGATG 1301717 Query 78624 ATAACAGAATTTAGTTTATCTTTGTATTTG--GTAACAATATCCA----TGACAGTAGTT 78677 || |||||||||| ||||| |||| | |||||| |||| |||| | Sbjct 1301716 ATGGCAGAATTTAGGCAATCTT--TATTGGCCAAAACAATGTCCAGTGTTGAC----TTG 1301663 Query 78678 GAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATT 78737 | | || | ||| || ||||| | ||||| | ||||| | | |||||||| Sbjct 1301662 GCCACCATGGAAGAGTGTTTGCCATTATGTGGATTTATGTAGTTGTAAAGGTCTTCCATC 1301603 Query 78738 ACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCT 78797 ||||||||||| | ||| |||||||| ||||| | ||||||||||| || ||||| || Sbjct 1301602 ACATCACTAAACATTTTCTTTGTTTCTTTGTGCAAGTTAGATACAGCAATCCTTGCTGCC 1301543 Query 78798 AGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATA 78857 ||||| ||||| ||||| || | ||||| | || || ||| |||| || || ||| || Sbjct 1301542 AGAATGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTA 1301483 Query 78858 TCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTTCAT 78907 |||| || | | ||||||||| |||| | ||||| || |||||||| Sbjct 1301482 TCTAGTTCAACCATGGTGACCCCACTATACAAGCCTTGGATTACTTTCAT 1301433 >seq48864 Length=438413 Score = 336 bits (372), Expect = 3e-87 Identities = 560/803 (70%), Gaps = 17/803 (2%) Strand=Plus/Plus Query 47797 AAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTTTTT 47853 |||||||| ||||||| | |||| ||| || | || |||||||||||||| | | Sbjct 419683 AAAAGTCAGCATCTAAGGTAAAAGAATTCTCGGTTGGACTTGACATAACTCCCATCCTCT 419742 Query 47854 GATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCA 47913 |||| ||||| || | ||||| || || ||||| || ||||||| | | ||||| |||| Sbjct 419743 GATACTCACCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTAAAATATTCTCCA 419802 Query 47914 TAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAGTC 47973 |||| ||||||||||| || | | ||| | ||||||| | ||| || |||| Sbjct 419803 TAAAGTCAAATGGATTTCCTACTCTGAAAACCTCGCTAAATCCCAGTTCCAGCATAAGTC 419862 Query 47974 TATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAA 48033 ||| ||||| || || || || ||||||| | || ||||| | || || || | Sbjct 419863 TATTGGCAACAAACTCAATGTACTGCTTCATCAAG-CGCAGTTCATCTCAATGAGCTTCA 419921 Query 48034 CTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGA-TAGTGACAGCATCCACTATTATCGAT 48092 | || | |||||| || || ||||| ||||| | | ||||||||| | || || | Sbjct 419922 CAGGCAAAGCCTCTGTGAGGAACTCCTGTTCCACTCTTGACAGCATTGATAATGATTTCT 419981 Query 48093 GTTACCGTTTCCTCACTTGGTGGATAC---AACAAATGTTTAAACATTAAACATGCAAAA 48149 | || | | ||| | ||||| | || |||| ||||| | | |||| | Sbjct 419982 TTCACTCTCTGCTC---TAACGGATAGTGTAGCAGGCGTTTGAACATCAGGTAGGCAACA 420038 Query 48150 TCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATT 48209 | ||| || | || |||||||| ||||| | ||| || |||||||||||||| ||||| Sbjct 420039 TTACAGTGTAAACTCTCATCTCTGCTAATCAGTTCATTGGAAAATGTGAGACCAGGCATC 420098 Query 48210 AGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCT 48269 |||| |||| |||||||| ||||| || || || |||| |||||| || |||||| Sbjct 420099 AGTCTTCGTTCCTTGAGCCAGAATATCTATGCAAACGAGCCAGTAAAGAAGATTCCTTCT 420158 Query 48270 ACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT-----ATCCACC 48324 || || ||||| || | | ||||| || | || || || ||| ||||| | Sbjct 420159 ACTGCTGCAAAAGCTACACAACGTTCTCCATAGGTAGCCTCCTT-TGTCCCCAATCCAAC 420217 Query 48325 GTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAA 48384 | |||||||| |||| |||||| ||||||||||| ||||| || ||| | ||||||| Sbjct 420218 GCAAGGCCCAATCTGCCTCCTTCTTGACACAAGGCATGGTTTCAATGGCACTGAAGAGAA 420277 Query 48385 AGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGT 48444 | | |||| ||| |||||||| |||||| || || | | |||||||||||| || Sbjct 420278 ATTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAAACTATACATTTCAGAAG 420337 Query 48445 GAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCT 48504 | || ||||| || || || || || || || ||||| | |||||||| || | || | Sbjct 420338 GTATGTTTTCCATGGCAATTTGGAAGCCATACAAACAGCGGGCTTCTGTAATGTCAACTT 420397 Query 48505 CCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATG 48564 | | |||||| || ||| || |||||||| || ||||||| || |||| || | Sbjct 420398 CTTGGCTAAATCGCTCCACCAGGTTTTCATTTACGATGCCATCACATGCTACAAAGAAAG 420457 Query 48565 CTAATACATGTTTAATAAAATAT 48587 | | ||||| || |||||| Sbjct 420458 CCAGAACATGGGATATGAAATAT 420480 Score = 333 bits (368), Expect = 4e-86 Identities = 559/803 (70%), Gaps = 17/803 (2%) Strand=Plus/Plus Query 47797 AAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTTTTT 47853 |||||||| ||||||| | |||| ||| || | || |||||||||||||| | | Sbjct 414760 AAAAGTCAGCATCTAAGGTAAAAGAATTCTCGGTTGGACTTGACATAACTCCCATCCTCT 414819 Query 47854 GATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCA 47913 |||| ||||| || | ||||| || || ||||| || ||||||| | | ||||| |||| Sbjct 414820 GATACTCACCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTAAAATATTCTCCA 414879 Query 47914 TAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAGTC 47973 |||| ||||||||||| || | | ||| | ||||||| | ||| || |||| Sbjct 414880 TAAAGTCAAATGGATTTCCTACTCTGAAAACCTCGCTAAATCCCAGTTCCAGCATAAGTC 414939 Query 47974 TATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAA 48033 ||| ||||| || || || || ||||||| | || ||||| | || || || | Sbjct 414940 TATTGGCAACAAACTCAATGTACTGCTTCATCAAG-CGCAGTTCATCTCAATGAGCTTCA 414998 Query 48034 CTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGA-TAGTGACAGCATCCACTATTATCGAT 48092 | || | |||||| || || ||||| ||||| | | ||||||||| | || || | Sbjct 414999 CAGGCAAAGCCTCTGTGAGGAACTCCTGTTCCACTCTTGACAGCATTGATAATGATTTCT 415058 Query 48093 GTTACCGTTTCCTCACTTGGTGGATAC---AACAAATGTTTAAACATTAAACATGCAAAA 48149 | || | | ||| | ||||| | || |||| ||||| | | |||| | Sbjct 415059 TTCACTCTCTGCTC---TAACGGATAGTGTAGCAGGCGTTTGAACATCAGGTAGGCAACA 415115 Query 48150 TCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATT 48209 | ||| || | || |||||||| ||||| | ||| || |||||||||||||| ||||| Sbjct 415116 TTACAGTGTAAACTCTCATCTCTGCTAATCAGTTCATTGGAAAATGTGAGACCAGGCATC 415175 Query 48210 AGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCT 48269 |||| |||| |||||||| ||||| || || || ||| |||||| || |||||| Sbjct 415176 AGTCTTCGTTCCTTGAGCCAGAATATCTATGCAAACGAGACAGTAAAGAAGATTCCTTCT 415235 Query 48270 ACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT-----ATCCACC 48324 || || ||||| || | | ||||| || | || || || ||| ||||| | Sbjct 415236 ACTGCTGCAAAAGCTACACAACGTTCTCCATAGGTAGCCTCCTT-TGTCCCCAATCCAAC 415294 Query 48325 GTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAA 48384 | |||||||| |||| |||||| ||||||||||| ||||| || ||| | ||||||| Sbjct 415295 GCAAGGCCCAATCTGCCTCCTTCTTGACACAAGGCATGGTTTCAATGGCACTGAAGAGAA 415354 Query 48385 AGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGT 48444 | | |||| ||| |||||||| |||||| || || | | |||||||||||| || Sbjct 415355 ATTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAAACTATACATTTCAGAAG 415414 Query 48445 GAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCT 48504 | || ||||| || || || || || || || ||||| | |||||||| || | || | Sbjct 415415 GTATGTTTTCCATGGCAATTTGGAAGCCATACAAACAGCGGGCTTCTGTAATGTCAACTT 415474 Query 48505 CCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATG 48564 | | |||||| || ||| || |||||||| || ||||||| || |||| || | Sbjct 415475 CTTGGCTAAATCGCTCCACCAGGTTTTCATTTACGATGCCATCACATGCTACAAAGAAAG 415534 Query 48565 CTAATACATGTTTAATAAAATAT 48587 | | ||||| || |||||| Sbjct 415535 CCAGAACATGGGATATGAAATAT 415557 >seq805 Length=2268304 Score = 134 bits (148), Expect = 2e-26 Identities = 495/758 (65%), Gaps = 47/758 (6%) Strand=Plus/Minus Query 77364 TATGTTTCATAAGGTCCTT-CTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTA 77422 || || ||||| || || | || ||| || || ||||| || ||||||| ||||| || Sbjct 1613369 TAGGTGTCATACGGGCCATACTCTTTG-GCCAGGTCACAGCTGGCTTCCAGAGCTCCATA 1613311 Query 77423 ATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATA 77482 |||| | ||||| || || | |||||| || | || || ||| ||||| |||| Sbjct 1613310 ATAAGTGGTTTCAAAGATTTGCTTATTCAGTAACAGGGCCTCTGGACTCTCAAAATGATA 1613251 Query 77483 ATGTAA--AAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGT 77540 | | | |||| |||| ||||| || | || ||||| ||||| || | || Sbjct 1613250 -TCTCATCAAGA-TAAAAGCATCGGCCA------GA---CCAATTCCAATGGGGCGATAA 1613202 Query 77541 CTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTG 77600 ||||| || | || ||||||||||| || || | | || | ||||||||| Sbjct 1613201 TGTTTATTTGATAAGCATGCCTCTGGAATAGGGTAGTAGCTTACATCAACAATTTTATTC 1613142 Query 77601 AGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATCT 77660 | |||| |||| |||||| || | ||||| ||| ||| || | ||| Sbjct 1613141 AAGTTTCGGACAATGACTTTAGTGACTTGGGCCAGTTTCTTAAAGTCATATGTGTGCTCT 1613082 Query 77661 A---TAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCG 77717 | ||| ||| |||| || || || || || ||||||||||| | || | | Sbjct 1613081 GATGTGACATACACATTCAGGGCCATGGAAGCCAGGTTACAAACTGCAAGTTCTCT---G 1613025 Query 77718 TTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGT 77777 ||| ||| | || ||| || || || || || ||||||| ||| | ||||| || || Sbjct 1613024 CTGGTATACTCTACTATTTCTGTGCACAGGTTGCTACATTCGATCATTCCCAGGTTCTGC 1612965 Query 77778 TGGTTGCTCTT---TTTATTGCAT---GAGTCCTTATAAAGAATAAACGGAGTCCCGGTT 77831 ||||||||||| ||| ||| | || || || || | | || || || | Sbjct 1612964 TGGTTGCTCTTCCTTTTTTTGATTACTGAATCTTTGAGGAGCAAGTAGGGGGTACCAATC 1612905 Query 77832 TCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATCATAGATTTGTA 77890 ||| |||| || || | ||||| | ||| | | || ||||| | | |||| | Sbjct 1612904 TCAGTCTGAGACTCAACAATAGCATACCAAA-GCTGCTGAGCTTC---CCCAACTTTGCA 1612849 Query 77891 TC---GCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATC 77947 | | || | ||||| | ||||||| | ||||||| |||| |||||| Sbjct 1612848 AACATGACCCTGCTTCTCATACTTCTCATATAGCTCT-CAAATTCTTCTCTCCAAACTGG 1612790 Query 77948 AT--CCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATC---TTCCTTA 78002 || ||| |||| || |||||||| |||||||| |||||||| || |||| Sbjct 1612789 ATGACCAGGTCAGGACACTCATTTGGACACATCAAAGACCAGTCCTGATTAGTTTCC--- 1612733 Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 ||||||||||| |||||||| || ||||| ||| ||| | ||||| | || | || Sbjct 1612732 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGACCAAAGGAAAGATCCCTGGCACGCTGC 1612673 Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTC 78100 ||||| |||||||| ||| || | || ||||| ||| Sbjct 1612672 TCTTCCTTTCCTGTGTTCCTT---AAATTGAGAAGCTC 1612638 >seq75 Length=11204613 Score = 129 bits (142), Expect = 8e-25 Identities = 100/119 (84%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 |||||||| ||||| | ||| |||||||||||||| |||||||| ||||| ||||| ||| Sbjct 8448222 TCATCTCTGCTAATCAGTTCATTAGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTCTTG 8448281 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283 ||||| ||||||| || || || ||||||||||| || |||||||| || ||||| || Sbjct 8448282 AGCCAGAATATTGATGCAAACGAGCCAGAAAAGAAGATTCCTTCTACTGCTGCAAAGGC 8448340 Score = 89.7 bits (98), Expect = 7e-13 Identities = 103/138 (75%), Gaps = 3/138 (2%) Strand=Plus/Plus Query 47795 TTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTTT 47851 ||| ||||| |||| || | |||| ||| || | || ||||| |||||||| | Sbjct 8444815 TTAGAAGTCCGCATCCAAGGTAAAAGAATTCTCGGTTGGACTTGACATCACTCCCATCCT 8444874 Query 47852 TTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 47911 ||||| || || || | ||||| || || ||||| || ||||||| ||| ||||| || Sbjct 8444875 CTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCTC 8444934 Query 47912 CATAAAATCAAATGGATT 47929 |||||| ||||||||||| Sbjct 8444935 CATAAAGTCAAATGGATT 8444952 Score = 86.0 bits (94), Expect = 9e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 48391 tttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATAT 48450 |||| ||| |||||||| |||||| || || | |||||||||||||| || || || | Sbjct 8452268 TTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGT 8452327 Query 48451 TTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTC 48505 |||| || || || || || || || ||||| | |||||||| ||||| || || Sbjct 8452328 TTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTTATCTGAACTTC 8452382 >seq79 Length=8883450 Score = 123 bits (136), Expect = 3e-23 Identities = 107/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| | || Sbjct 707240 TGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATAAGGTTCAATGGAC 707299 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 ||||| || ||||| || |||||||| |||||||| ||||| || || | | |||||| Sbjct 707300 TCATTATTCCCCAAGATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 707359 Query 77247 TTTCTGAGACCAT 77259 ||||| | ||||| Sbjct 707360 TTTCTTACACCAT 707372 Score = 122 bits (134), Expect = 1e-22 Identities = 132/175 (75%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 78739 CATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTA 78798 || ||||||| | ||| |||||||| ||||| | ||||||||||| || ||||| || | Sbjct 753040 CACCACTAAACACTTTCTTTGTTTCTTTGTGCAAGTTAGATACAGCAATCCTTGCTGCCA 753099 Query 78799 GAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATAT 78858 |||| ||||| ||||| || | ||||| | || || ||| |||| || || ||| ||| Sbjct 753100 GAATGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTAT 753159 Query 78859 CTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTTCATGGCGAT 78913 ||| || | | ||||||||| |||| | ||||| || |||||||| | ||| Sbjct 753160 CTAGTTCAACCATGGTGACCCCACTATACAAGCCTTGGATTACTTTCATCGTGAT 753214 Score = 114 bits (126), Expect = 2e-20 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908 |||| || ||||| ||||| || || |||||| ||| |||| || || ||||| || | Sbjct 703085 TCCAGCCATAGAAGTGCATACTGGTGAGTTTGCCATAGTTAGGTTCAGCAATATGGATGT 703144 Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968 ||| |||||||||||||| |||||||| ||||| || || ||||| || | || || | Sbjct 703145 TCAAAGACTGACTTTGATCAATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTTT 703204 Query 76969 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 77019 | || | |||||||| | ||| || ||| ||| || | ||||| |||| Sbjct 703205 TCTGGGAGATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 703255 Score = 102 bits (112), Expect = 1e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 ||||||||||| |||||||| || ||||| || |||| || ||||| | || | || Sbjct 735387 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGATCCCTGGCACGCTGC 735446 Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122 ||||| |||||||| ||||| || | |||||||||||| | || || ||||||| ||| Sbjct 735447 TCTTCCTTTCCTGTGTTCTTCTTTAAATCGAGAAACTCAAAGATGTCTAAATGCCAAGGT 735506 Query 78123 TCTAGATATATTGC 78136 || || || || || Sbjct 735507 TCCAGGTAAATAGC 735520 Score = 96.9 bits (106), Expect = 5e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458 || || ||||| || | || ||||| ||||| || ||||| || |||||||| || || Sbjct 744956 GTGCCAGCATTGAAGAGAGTGGGAGAGGCATGAGTGAACCACTTCTCAGAAAGAAGGTTA 745015 Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518 ||||||||||| || | || ||||| || ||||| || || | ||| | ||||||| Sbjct 745016 TATGTTTCAATTGCAGCATCGATGTCTTCTTTGTGAATCCCCACAGATACCCTCATCAAC 745075 Query 78519 ATATGCTGAGGTCTTTCAACC 78539 || || || ||||||||| || Sbjct 745076 ATGTGTTGCGGTCTTTCAGCC 745096 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 77915 ATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCA 77974 ||||||| |||||||| ||||||||||| ||||||| ||||| || |||||||| || Sbjct 734934 ATATAGCTTCTCAAATTCTTCTCCCCAAACTTCATCCAGGCCAGGACACTCATTTGGACA 734993 Query 77975 CATCAATGACCAGTC 77989 ||||||||||||||| Sbjct 734994 CATCAATGACCAGTC 735008 >seq44217 Length=341162 Score = 93.3 bits (102), Expect = 6e-14 Identities = 243/362 (67%), Gaps = 19/362 (5%) Strand=Plus/Minus Query 45876 TCCAGTGGATCCAAATCCTT--GAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCC 45933 |||||| || ||||| |||| || | || | | ||| |||| | | ||| ||||| Sbjct 123295 TCCAGTAGAACCAAAACCTTCTGAACC-CTGTGT-AGTGTCATCCAAACCTTGAACTTCT 123238 Query 45934 TTCAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATTT 45993 | | || || ||| | || |||| | | || || || || |||| ||||| | || Sbjct 123237 TCTATTTCTGGGTAAAAAATTCGTTCACAAATGAGCTGTGCAATTCGGTCACCTTTTTTA 123178 Query 45994 ATTTCAAATATATCTTTTCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATCT 46053 | |||||| | ||||| ||| ||| | || | || |||| | |||||||||||| Sbjct 123177 ACTTCAAACTTTTCTTTGCCAAAATTAAATAGTACAACACCAACATTTCCTCTATAATCT 123118 Query 46054 TCATCTATTACTCCCCCTCCCACAT---CGATACCTTTTAGAGACAGTCCAGATCTAGGA 46110 |||||||| || || |||| |||| ||| |||| || || ||||| | ||| Sbjct 123117 TCATCTATGACACCAGCTCCTACATCTACGAAGTGTTTTGCAGCCAAGCCAGAACATGGA 123058 Query 46111 GCTATTCTTCCATAA----CAGAATTTGGGCATAGACATCCGAATATCTGTTTTAATCAA 46166 |||| |||||||||| ||||| || | || ||| |||| || || || | ||| Sbjct 123057 GCTACTCTTCCATAACACCCAGAA----GGAAGAGCTATCTGAATGTCAGTCTTCA-CAA 123003 Query 46167 TCTCCTTTCTCC--AGGAGGGATAGTATAGTCGTACGCACTGTATAAATCATATCCTGCT 46224 |||||||| ||| || | || || || || |||||||| | || || || || Sbjct 123002 -GGGCTTTCTCCATAGGTGGCACTGTGTAATCATAGGCACTGTACAGGTCGTAGCCCGCC 122944 Query 46225 GC 46226 || Sbjct 122943 GC 122942 >seq199 Length=4383281 Score = 84.2 bits (92), Expect = 3e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 48638 TACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACT 48697 ||| ||||| ||||||||||| ||||||| ||| | ||||||||| ||||| ||||| Sbjct 4193742 TACCTCTTCTGCTGTCCAAAACGATGCCTGTGCCTGTTTATACATCTTCCAGATATCGGG 4193683 Query 48698 GTATTGGATTGGGAAAATAACAAATC 48723 ||| || ||||| || || ||||||| Sbjct 4193682 GTACTGTATTGGAAAGATGACAAATC 4193657 Score = 84.2 bits (92), Expect = 3e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 48523 CCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAA 48582 ||||||| |||||||| ||||||||||| || |||||||| ||||| | || |||| Sbjct 4196940 CCAAATTTTCATTTACAATTCCATCACTGGCTGCAAAAAAGGCTAAGATGTGAGAGATAA 4196881 Query 48583 AATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATA 48633 |||| ||||| | | | || |||||||||| | || ||| ||||||| Sbjct 4196880 AATACTTTTCATCTGGCTTTAGCTTATTCCAGTGAGGGAGATCCTTTGATA 4196830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694228119480000