Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_031035.1 Length=61626 Score E Sequences producing significant alignments: (Bits) Value seq46163 199 2e-46 >seq46163 Length=1271 Score = 199 bits (220), Expect = 2e-46 Identities = 197/255 (77%), Gaps = 0/255 (0%) Strand=Plus/Plus Query 25053 ATGTCGGAATATCAAGCCGCGCACCGGCGTGCGTGCTGCGCAGCAATCACAGCGCTCGGC 25112 ||||| ||||| ||||| ||||||| || || |||||||| |||||||| || |||||| Sbjct 227 ATGTCCGAATACCAAGCACCGCACCGACGCGCCTGCTGCGCCGCAATCACCGCACTCGGC 286 Query 25113 AACCGCATCGGCCTGTACTCGGGTGCCACACGCGTCGGCACCGTGTTTGCAGATACCACG 25172 ||||| ||||| || | | | ||| |||| || || ||||||| | || || ||||| Sbjct 287 AACCGAATCGGGCTATTCGCCGGTTCCACCCGGGTAGGCACCGCCTACGCCGACACCACC 346 Query 25173 TGGGGCACGCCGGCCGACGTCACTGAGTCGGGCGTCGACAAAGCGCAGTCGACCGGCTCG 25232 |||| ||| || | ||| ||||| || || ||| ||||||| || || ||||||||| Sbjct 347 TGGGCCACCCCAGTCGATGTCACCGAATCCGGCATCGACAAGGCATCATCCACCGGCTCG 406 Query 25233 ACAGTGACCATCACCGTACCTGGCGGCACGGTGGCGAACGGCGCAACGATCAACCGGTAC 25292 || |||||| | |||||||||||||| ||||| |||||| | ||||||||||||| Sbjct 407 CTGGTAACCATCTCGGTACCTGGCGGCACCGTGGCCAACGGCACGGTGATCAACCGGTAC 466 Query 25293 GGGGTGTTCAACGGC 25307 || ||| | ||| || Sbjct 467 GGCGTGGTGAACCGC 481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 196962827542000