Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq53 803 0.0 seq48864 316 3e-81 seq805 127 3e-24 seq79 127 3e-24 seq75 116 5e-21 seq199 109 8e-19 seq44217 93.3 6e-14 >seq53 Length=2810707 Score = 803 bits (890), Expect = 0.0 Identities = 1531/2226 (69%), Gaps = 64/2226 (3%) Strand=Plus/Minus Query 75397 TGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAA 75456 ||||||| |||| | || ||| ||||| ||||| || | | | | |||| || ||||| Sbjct 1303543 TGCTGGTCTTGTCCTTAAATAATACATCCCAGTCTTCAAATTCTGCTTCCAGCCATAGAA 1303484 Query 75457 ATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACT 75516 ||||| || || |||||| ||| | || || || ||||| ||||||| |||||||| Sbjct 1303483 GTGCATACTGGTGAGTTTGCCATAGTTAGGTTCAGCAATATGGATATTCAAAGACTGACT 1303424 Query 75517 TTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTC 75576 |||||| ||||||| |||| | || ||||| || | || || || || | ||||| Sbjct 1303423 TTGATCAATGAAAGTATCTCTCTTGGCTGCCATCTTGAGAACAGTTTTCTGGGAGATTTC 1303364 Query 75577 CCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGATTTG-TAT--TTTGAATGGA 75633 ||| ||||| || ||| || || | ||||| | || | || ||| | || || || Sbjct 1303363 CCACATAGTCTTATAAAGTTCCTTCAGGTCATCAGTAATTTCTGGTATGCTCTGGATAGA 1303304 Query 75634 TCCGCCATCAGAT---ATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGT 75690 ||||| || ||||| ||| || ||||| ||||||||||| | ||| || Sbjct 1303303 ---GCCATTGCATGCAATAATCTGATTTTTCATCTCTTCATTCCACAAGCCCCACTCAGT 1303247 Query 75691 TAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGT 75750 | | || | || | |||||||| ||||| ||||||||||| ||||| ||||| |||| Sbjct 1303246 AAGATCTTTCAGTAAGTGAGGATTTACAATCTGAAATTCTCCTGACAAGACTCTGTGAGT 1303187 Query 75751 GTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGA 75810 ||| || || |||||||| ||||| | || ||||| || ||||| || |||||||||| Sbjct 1303186 GTAGATGTTGCTGGTATAAGGTTCAATGGACTCATTATTCCCCAAGATCTGAGCAGTTGC 1303127 Query 75811 AGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATC 75870 |||||| | ||| || || | | |||||| ||||| | ||||| || || || || Sbjct 1303126 AGCAGTAGTCATTGGGGCAATAAGTAAACTGTTTCTTACACCATACTTTGCAATCTTGTC 1303067 Query 75871 TTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAG 75930 || ||| |||||| ||||| || |||| || ||||| ||| | ||| || || || Sbjct 1303066 CTTGAGAAGTTTCCAGTCCCACAGGTCTGTGGGAGTAACATTCCACACATCATACTGAAG 1303007 Query 75931 AATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAG 75990 |||| | ||||| | || || | ||| ||||| || | || | || || || || Sbjct 1303006 AATTTCTTTGCTTACTGGAGAGCCCTCATAGGTTTCCTATGGACCATACTCTTTGGCCAG 1302947 Query 75991 TTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATC 76050 || || || || || || || || |||||||| |||| || || | |||||| || Sbjct 1302946 GTCACAGCTGGCTTCCAAGGCTCCATAATAAATAGTTTGAAAGATTTGCTTATTCAGTAA 1302887 Query 76051 TTGCGCTTCAAGACTATCAAAAGGATAATGTAA--AAGAATAAATGCATCTGCTAGTCCC 76108 || | || |||| ||||| ||||| | | | |||| |||| ||||| || || | Sbjct 1302886 CTGGACCTCTGGACTTTCAAATGGATA-TCTCATCAAGA-TAAAAGCATCAGCCAGAACT 1302829 Query 76109 TGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGG 76168 ||||| ||||| ||||| || ||| | ||||| || | | || |||||||||||| Sbjct 1302828 TGAACCCCAATTCCAATGGGGTGATGGCGTTTATTTGATACGTATGCCTCTGGAATAGGG 1302769 Query 76169 TAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTT 76228 || || || ||| ||||||||||| | |||| |||| |||| | || || Sbjct 1302768 TAGTAGTTTCTATTAATAATTTTATTCAAGTTTCGAACAATGACTTCAGTGACTTCAGCC 1302709 Query 76229 AGTTTGAGAAAATCAAA---TTTTCCATCTATCACAAACATATTAAGAGCTATAGATGCT 76285 || || ||| || | | | | | | ||| ||||||| || || | || || Sbjct 1302708 AGCTTCTTAAAGTCGTACGTGTGTTCTGATGTGACATACATATTCAGGGCCAGGGAAGCC 1302649 Query 76286 AGATTACAAACGGCTACCTC--ATTAGCATTGGCATATTGTATTATCTCCGTGCATAGAT 76343 | |||||||| || ||||| || || ||| ||| | || ||| || ||||| || | Sbjct 1302648 AAGTTACAAACTGCAACCTCCTCTTTGC--TGGTATACTCTACTATTTCTGTGCACAGGT 1302591 Query 76344 TACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTAT 76403 | || || ||||| | ||| || || || ||||||||||| | ||||| || | || | Sbjct 1302590 TGCTGCATTTGATTGCTCCCAGGTTCTGCTGGTTGCTCTTATGATTACAGGAATTTTTGT 1302531 Query 76404 AAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGA-CGACT 76462 | || | | || || |||| || |||| || || ||||||| | ||| | | || Sbjct 1302530 AGAGCATGTA-GGGGTGTCAGTCTCTGTCTGAGACTCAATAATAGCATACCAAAGCTGCT 1302472 Query 76463 CTAGCTTTTATTATAGATTTGT-ATCGCTTCTCT-CTT-TCATATTGTGTATATAACCGT 76519 ||||| | | | ||||| | | | || ||| ||||| | | ||||| | Sbjct 1302471 -GAGCTT---TCACAACTTTGTGAATGTGACCCTGCTTCTCATACTTTTCATATAGCTTC 1302416 Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 |||||||| ||||||||||| ||||||| |||||||| ||||| ||||||||||| ||| Sbjct 1302415 TCAAATTCTTCTCCCCAAACTTCATCCAGGCCAGGACACTCATTTGGACACATCAAAGAC 1302356 Query 76580 CA---CTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATA 76636 || || | | |||| |||| |||||| |||||||| | ||||| || |||| Sbjct 1302355 CAGTCCTGATTAGTTTCC---ACCCATTTCATGAAGAGATCTGAAATCCAAAGGGCAAAG 1302299 Query 76637 AATAGAT--CTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACT 76694 || |||| |||| | || ||||||| |||||||| ||||| || | ||| || |||| Sbjct 1302298 AAAAGATCCCTCGCATGCT--GTTCTTCCTTTCCTGTGTTCTTCTTTAAATCGAGAAACT 1302241 Query 76695 CCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTAC 76754 | | || || ||||| | |||| || || || || | | || | || || || | Sbjct 1302240 CAAAGATGTCTAAATGCTAAGGTTTCAGGTAAATAGCAAATGCCCCAAGACGCTTGTTTC 1302181 Query 76755 CTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGT 76814 | || ||||||| |||| || || ||| | || ||||||| |||||| | || ||| | Sbjct 1302180 CACCTTGATCTACGTATCGAGCTGTATTACTGTATACTCTCAGCATTGGTACAAGGCCAT 1302121 Query 76815 TAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATA 76874 | || | ||||| || |||| || || || ||| || |||||| ||| | || | Sbjct 1302120 TGGAATTGCCATTAGTCCCAGCAAGGTAGCTGCCAGTAGCCCGAATACAACTCACAGCAA 1302061 Query 76875 GGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGC 76934 || ||||| || || ||||| || | |||||| | || | || ||||| || | Sbjct 1302060 CACCAATTCCCCCAGCAGACTTAGAAATCAAAGCACACTGCTTTAGAGTATCATAAATCC 1302001 Query 76935 CCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAG 76994 | || || || ||||| ||||||| ||||| ||| || |||| | || | || | Sbjct 1302000 CTTCAATGCTGTCATCTTTCATGTTCAGAAGGAAATAGGTAGAAAGTTCTGGGCGATTGG 1301941 Query 76995 TTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGT 77054 | || ||||| || | || ||||| |||||||||||||| || |||||||| || || | Sbjct 1301940 TGCCAGCATTGAAGAGAGTGGGAGAGGCATGAGTGAACCACTTCTCAGAAAGAAGGTTAT 1301881 Query 77055 ATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACA 77114 |||||||||| | || || || || || ||||| || |||| || | |||||||| Sbjct 1301880 ATGTTTCAATTGCAGCATCAATGTCTTCTTTGTGAATCCCCACAGATACCCTCATCAACA 1301821 Query 77115 TATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAG 77174 | || || |||| || | || | | || |||||||| || || | ||||| | Sbjct 1301820 TGTGTTGCGGTCTGTCAGCCACTTTCCCACTAATCTTCAACAAATAGGACTGCTCCAATG 1301761 Query 77175 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTT 77234 ||||| |||||||| ||||| ||||| |||| || || || || | |||||||| Sbjct 1301760 CCTTAAAGCCAAAATAATTGTAAGAAAAATCTCGATCATAGATGATGGCAGAATTTAGGC 1301701 Query 77235 TGTCCTTATATTTGG---TAACAATATCCA----TGACAGTGGTAGAAATAATTGGAGAT 77287 || ||| |||| |||||| |||| |||| | | | || | ||| Sbjct 1301700 AATCTTTA---TTGGCCAAAACAATGTCCAGTGTTGAC----TTGGCCACCATGGAAGAG 1301648 Query 77288 CGTATTCCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGt 77347 || | ||||| | ||||| | ||||| | | ||||||||| || || ||||| | | Sbjct 1301647 TGTTTGCCATTATGTGGATTTATGTAGTTGTAAAGGTCTTCCATCACATCACTAAACATT 1301588 Query 77348 ttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCA 77407 || |||||||| ||||| | || ||||| || || || || || ||||| ||||||||| Sbjct 1301587 TTCTTTGTTTCTTTGTGCAAGTTAGATACAGCAATCCTTGCTGCCAGAATGGCATAGTCA 1301528 Query 77408 GGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGTA 77467 || || | ||||| |||| || ||| |||| || || |||||||||| ||| | | Sbjct 1301527 GGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTAGTTCAACCATG 1301468 Query 77468 GTAACTCCGTTATATAGCCCTTGAATAACTTTCATGGCTATTTTGATAGGATCTACAAAC 77527 || || || |||| | ||||| || |||||||| | || |||| | | ||| Sbjct 1301467 GTGACCCCACTATACAAGCCTTGGATTACTTTCATCG-TA-------AGGA-CCAAAAAG 1301417 Query 77528 TCGGTGTTCAAACCATAACATAATTTTCT-AATACGAGATGTGATTTTATCAAACATGAC 77586 || | || | |||||||| || |||| | | |||||| ||||| | |||||||| Sbjct 1301416 TCCATATTGAGTCCATAACA-AAGCTTCTGGTTTCTAGATGTAATTTTGTAGAACATGAC 1301358 Query 77587 ATTCTC 77592 | ||| Sbjct 1301357 TTGCTC 1301352 >seq48864 Length=438413 Score = 316 bits (350), Expect = 3e-81 Identities = 555/801 (69%), Gaps = 13/801 (2%) Strand=Plus/Plus Query 46286 AAAAGTCGACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTTTTT 46342 ||||||| ||||||| | |||| ||| || | | ||||||||||||||| | | Sbjct 419683 AAAAGTCAGCATCTAAGGTAAAAGAATTCTCGGTTGGACTTGACATAACTCCCATCCTCT 419742 Query 46343 GGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCA 46402 | || |||||||| | ||||| || || ||||| || ||||||| | | ||||| |||| Sbjct 419743 GATACTCACCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTAAAATATTCTCCA 419802 Query 46403 TAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCAGTC 46462 |||| ||||| ||||| || | ||| | ||||||| | ||| || |||| Sbjct 419803 TAAAGTCAAATGGATTTCCTACTCTGAAAACCTCGCTAAATCCCAGTTCCAGCATAAGTC 419862 Query 46463 TATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGA 46522 ||| ||||| || || || ||| ||||||| | || ||||| | ||||| || | Sbjct 419863 TATTGGCAACAAACTCAATGTACTGCTTCATCAAG-CGCAGTTCATCTCAATGAGCTTCA 419921 Query 46523 CCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAA-TAGTGACAGCATCCGATATT-ATCGA 46580 | || | |||||| || || ||||| ||||| | | ||||||||| |||| | || Sbjct 419922 CAGGCAAAGCCTCTGTGAGGAACTCCTGTTCCACTCTTGACAGCATT-GATAATGATTTC 419980 Query 46581 TGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAATC 46640 | | ||| | | ||| || || | || |||| ||||| | | |||| || Sbjct 419981 TTTCACTCTCTGCTCTAACGGATAGTGTAGCAGGCGTTTGAACATCAGGTAGGCAACATT 420040 Query 46641 ACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAG 46700 ||| || | | |||||||| ||||| | ||| || ||||||||||| |||||||| || Sbjct 420041 ACAGTGTAAACTCTCATCTCTGCTAATCAGTTCATTGGAAAATGTGAGACCAGGCATCAG 420100 Query 46701 TCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTAC 46760 || || | |||||||| ||||| || || || |||| |||||| || |||||||| Sbjct 420101 TCTTCGTTCCTTGAGCCAGAATATCTATGCAAACGAGCCAGTAAAGAAGATTCCTTCTAC 420160 Query 46761 AGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATG-----AATCCACCTT 46815 || || || || ||| | ||||| || | || || || || |||||| | Sbjct 420161 TGCTGCAAAAGCTACACAACGTTCTCCATAGGTAGCCTCCTT-TGTCCCCAATCCAACGC 420219 Query 46816 TGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAG 46875 |||||||| |||| ||||| ||||||||||| ||||| || ||| | |||||||| Sbjct 420220 AAGGCCCAATCTGCCTCCTTCTTGACACAAGGCATGGTTTCAATGGCACTGAAGAGAAAT 420279 Query 46876 tttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGA 46935 | |||| | |||||||| || || || || | | |||||||||||| ||| | Sbjct 420280 TCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAAACTATACATTTCAGAAGGT 420339 Query 46936 ATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCT 46995 |||||||| || || || || || || || ||||| | ||||| ||||| | || ||| Sbjct 420340 ATGTTTTCCATGGCAATTTGGAAGCCATACAAACAGCGGGCTTCTGTAATGTCAACTTCT 420399 Query 46996 GTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCC 47055 | |||||| || || || ||||| || || ||||||| || |||| || ||| Sbjct 420400 TGGCTAAATCGCTCCACCAGGTTTTCATTTACGATGCCATCACATGCTACAAAGAAAGCC 420459 Query 47056 AATACATGTTTAATAAAATAT 47076 | ||||| || |||||| Sbjct 420460 AGAACATGGGATATGAAATAT 420480 Score = 311 bits (344), Expect = 1e-79 Identities = 554/801 (69%), Gaps = 13/801 (2%) Strand=Plus/Plus Query 46286 AAAAGTCGACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTTTTT 46342 ||||||| ||||||| | |||| ||| || | | ||||||||||||||| | | Sbjct 414760 AAAAGTCAGCATCTAAGGTAAAAGAATTCTCGGTTGGACTTGACATAACTCCCATCCTCT 414819 Query 46343 GGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCA 46402 | || |||||||| | ||||| || || ||||| || ||||||| | | ||||| |||| Sbjct 414820 GATACTCACCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTAAAATATTCTCCA 414879 Query 46403 TAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCAGTC 46462 |||| ||||| ||||| || | ||| | ||||||| | ||| || |||| Sbjct 414880 TAAAGTCAAATGGATTTCCTACTCTGAAAACCTCGCTAAATCCCAGTTCCAGCATAAGTC 414939 Query 46463 TATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGA 46522 ||| ||||| || || || ||| ||||||| | || ||||| | ||||| || | Sbjct 414940 TATTGGCAACAAACTCAATGTACTGCTTCATCAAG-CGCAGTTCATCTCAATGAGCTTCA 414998 Query 46523 CCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAA-TAGTGACAGCATCCGATATT-ATCGA 46580 | || | |||||| || || ||||| ||||| | | ||||||||| |||| | || Sbjct 414999 CAGGCAAAGCCTCTGTGAGGAACTCCTGTTCCACTCTTGACAGCATT-GATAATGATTTC 415057 Query 46581 TGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAATC 46640 | | ||| | | ||| || || | || |||| ||||| | | |||| || Sbjct 415058 TTTCACTCTCTGCTCTAACGGATAGTGTAGCAGGCGTTTGAACATCAGGTAGGCAACATT 415117 Query 46641 ACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAG 46700 ||| || | | |||||||| ||||| | ||| || ||||||||||| |||||||| || Sbjct 415118 ACAGTGTAAACTCTCATCTCTGCTAATCAGTTCATTGGAAAATGTGAGACCAGGCATCAG 415177 Query 46701 TCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTAC 46760 || || | |||||||| ||||| || || || ||| |||||| || |||||||| Sbjct 415178 TCTTCGTTCCTTGAGCCAGAATATCTATGCAAACGAGACAGTAAAGAAGATTCCTTCTAC 415237 Query 46761 AGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATG-----AATCCACCTT 46815 || || || || ||| | ||||| || | || || || || |||||| | Sbjct 415238 TGCTGCAAAAGCTACACAACGTTCTCCATAGGTAGCCTCCTT-TGTCCCCAATCCAACGC 415296 Query 46816 TGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAG 46875 |||||||| |||| ||||| ||||||||||| ||||| || ||| | |||||||| Sbjct 415297 AAGGCCCAATCTGCCTCCTTCTTGACACAAGGCATGGTTTCAATGGCACTGAAGAGAAAT 415356 Query 46876 tttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGA 46935 | |||| | |||||||| || || || || | | |||||||||||| ||| | Sbjct 415357 TCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAAACTATACATTTCAGAAGGT 415416 Query 46936 ATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCT 46995 |||||||| || || || || || || || ||||| | ||||| ||||| | || ||| Sbjct 415417 ATGTTTTCCATGGCAATTTGGAAGCCATACAAACAGCGGGCTTCTGTAATGTCAACTTCT 415476 Query 46996 GTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCC 47055 | |||||| || || || ||||| || || ||||||| || |||| || ||| Sbjct 415477 TGGCTAAATCGCTCCACCAGGTTTTCATTTACGATGCCATCACATGCTACAAAGAAAGCC 415536 Query 47056 AATACATGTTTAATAAAATAT 47076 | ||||| || |||||| Sbjct 415537 AGAACATGGGATATGAAATAT 415557 >seq805 Length=2268304 Score = 127 bits (140), Expect = 3e-24 Identities = 468/716 (65%), Gaps = 48/716 (7%) Strand=Plus/Minus Query 75986 GCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTA 76045 || || || || || || || | || || |||||| | ||||| || || | |||||| Sbjct 1613342 GCCAGGTCACAGCTGGCTTCCAGAGCTCCATAATAAGTGGTTTCAAAGATTTGCTTATTC 1613283 Query 76046 AGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAA--AAGAATAAATGCATCTGCTA 76103 || | || || |||| |||||| |||| | | | |||| |||| ||||| || | Sbjct 1613282 AGTAACAGGGCCTCTGGACTCTCAAAATGATA-TCTCATCAAGA-TAAAAGCATCGGCCA 1613225 Query 76104 GTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAA 76163 | || ||| ||||| || | || ||||| || | || ||||||| Sbjct 1613224 GACC---------AATTCCAATGGGGCGATAATGTTTATTTGATAAGCATGCCTCTGGAA 1613174 Query 76164 TAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGT 76223 ||||||| || | | ||| | ||||||||| | |||| ||||| |||||| || | Sbjct 1613173 TAGGGTAGTAGCTTACATCAACAATTTTATTCAAGTTTCGGACAATGACTTTAGTGACTT 1613114 Query 76224 CCTTTAGTTTGAGAAAATCAAATTTTCCATC---TATCACAAACATATTAAGAGCTATAG 76280 ||||| ||| ||| || | || | | ||| ||| ||| || || || | Sbjct 1613113 GGGCCAGTTTCTTAAAGTCATATGTGTGCTCTGATGTGACATACACATTCAGGGCCATGG 1613054 Query 76281 ATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATA 76340 | || || |||||||| || | || | || ||| ||| | || ||| || ||||| | Sbjct 1613053 AAGCCAGGTTACAAACTGCAAGTTC-TCTGC--TGGTATACTCTACTATTTCTGTGCACA 1612997 Query 76341 GATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTC------TTTTTG-TTACAT 76393 | || ||||| | ||| |||| || || || ||||||||| |||||| |||| | Sbjct 1612996 GGTTGCTACATTCGATCATTCCCAGGTTCTGCTGGTTGCTCTTCCTTTTTTTGATTAC-T 1612938 Query 76394 GAGTCCTTATAAAGAACAA--ACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATT 76451 || || | | | || ||| | || || ||| | ||| |||| || || | ||||| | Sbjct 1612937 GAATC--TTTGAGGAGCAAGTAGGGGGTACCAATCTCAGTCTGAGACTCAACAATAGCAT 1612880 Query 76452 TCCAGA-CGACTCTAGCTT---TTATTATAGATTTGTATCGCTTCTCTCTTTCATATTGT 76507 ||| | | || ||||| | | | | | | || || | ||||| | Sbjct 1612879 ACCAAAGCTGCT-GAGCTTCCCCAACTTTGCAAACATGACCCTGCT---TCTCATACTTC 1612824 Query 76508 GTATATAACCGTTCAAATTCATCTCCCCAAACATCAT--CCAAACCAGGACATTCATTCG 76565 |||| | | |||||||| |||| |||||| || ||| ||||||| ||||| | Sbjct 1612823 TCATAT-AGCTCTCAAATTCTTCTCTCCAAACTGGATGACCAGGTCAGGACACTCATTTG 1612765 Query 76566 GACACATCAATGACCA---CTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTA 76622 |||||||||| ||||| || | | |||| || |||||||| |||||||| || | Sbjct 1612764 GACACATCAAAGACCAGTCCTGATTAGTTTCC---ACTCGTTTCATGAAGAGATCTGGAA 1612708 Query 76623 TCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTT 76678 |||| ||| ||| | ||||| | || | | ||||| |||||||| ||| || Sbjct 1612707 TCCAAAGACCAAAGGAAAGATCCCTGGCACGCTGCTCTTCCTTTCCTGTGTTCCTT 1612652 Score = 96.9 bits (106), Expect = 5e-15 Identities = 231/344 (67%), Gaps = 13/344 (4%) Strand=Plus/Minus Query 76784 TTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAA 76843 ||| | ||||||| ||| || | || ||| | | | ||||| || |||| || ||| Sbjct 1611085 TTACATACTCTCAGCATCGGTACAAGGCCATCGGCATTGCCATTAGTCCCAGCAACATAG 1611026 Query 76844 CTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATT 76903 || |||| || | |||| ||| | || | || | | | || || |||||| || Sbjct 1611025 CTGCCACTAGCTCAAATACAACTCACAGCAACACCAACTTCCCCAGCAGATTTAGAAATC 1610966 Query 76904 AGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGA 76963 | ||||| | || | |||||||| ||||| | | || || || ||||| | ||| Sbjct 1610965 AATGCACATTGCTTGAGAGTGTCATAAATGCCTTTGGTGCTGTCGTCTTTCATGCTCAGA 1610906 Query 76964 AGAAAACAGCTAGACATTTGATGA-TGAACAGTTCCTGCATTAAACAATGTAGGAGATGC 77022 || ||||||||||| | ||| ||| | || || ||||| | | |||| || Sbjct 1610905 AGTAAACAGCTAGAAAGTTG-TGAGCCATTGGTGCCAGCATTGA-----GAGTGAGAGGC 1610852 Query 77023 ATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCA 77082 |||||||||||| || ||||| || |||||| ||||||| | || || || || Sbjct 1610851 ATGAGTGAACCACTTCTCAGA---GAGGTTGTATATTTCAATTGCAGCATCAATGTCTTC 1610795 Query 77083 TTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTC 77126 || |||| ||| ||| || | ||||||||| || || |||| Sbjct 1610794 TTTGTGAA--CCT-CAGATACCCTCATCAACATGTGTTGCGGTC 1610754 >seq79 Length=8883450 Score = 127 bits (140), Expect = 3e-24 Identities = 108/133 (81%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| | || Sbjct 707240 TGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATAAGGTTCAATGGAC 707299 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 ||||| || ||||| || ||||||||||||||||| ||||| || || | | |||||| Sbjct 707300 TCATTATTCCCCAAGATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 707359 Query 75842 TTTCTGAGACCAT 75854 ||||| | ||||| Sbjct 707360 TTTCTTACACCAT 707372 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 75444 TCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATAT 75503 |||| || ||||| ||||| || || |||||| ||| | || || || ||||| || | Sbjct 703085 TCCAGCCATAGAAGTGCATACTGGTGAGTTTGCCATAGTTAGGTTCAGCAATATGGATGT 703144 Query 75504 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 75563 ||| |||||||||||||| |||||||| ||||| || || ||||| || | || || | Sbjct 703145 TCAAAGACTGACTTTGATCAATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTTT 703204 Query 75564 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 75614 | || | |||||||| | ||| || ||| ||| || | ||||| |||| Sbjct 703205 TCTGGGAGATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 703255 Score = 107 bits (118), Expect = 3e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 77339 CTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT 77398 ||||| | ||| |||||||| ||||| | || ||||| || || || || || ||||| Sbjct 753045 CTAAACACTTTCTTTGTTTCTTTGTGCAAGTTAGATACAGCAATCCTTGCTGCCAGAATG 753104 Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458 ||||||||||| || | ||||| |||| || ||| |||| || || |||||||||| | Sbjct 753105 GCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTAGT 753164 Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCAT 77502 || | | || || || |||| | ||||| || |||||||| Sbjct 753165 TCAACCATGGTGACCCCACTATACAAGCCTTGGATTACTTTCAT 753208 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || || ||||| || | || ||||| |||||||||||||| || |||||||| || || Sbjct 744956 GTGCCAGCATTGAAGAGAGTGGGAGAGGCATGAGTGAACCACTTCTCAGAAAGAAGGTTA 745015 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 ||||||||||| | || || || || || ||||| || |||| || | ||||||| Sbjct 745016 TATGTTTCAATTGCAGCATCGATGTCTTCTTTGTGAATCCCCACAGATACCCTCATCAAC 745075 Query 77114 ATATGCTGAGGTCGTTC 77130 || || || |||| ||| Sbjct 745076 ATGTGTTGCGGTCTTTC 745092 Score = 93.3 bits (102), Expect = 6e-14 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 75950 GATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAAC 76009 || || | ||| ||||| || | |||| || || || || || ||||| || || || Sbjct 728182 GAGCCCTCATAGGTTTCATATGGACCGTACTCTTTGGCCAGGTCACAACTGGCTTCCAAG 728241 Query 76010 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCA 76069 || || |||||||| ||||| || || | |||||| || || || || |||| ||| Sbjct 728242 GCTCCATAATAAATAGTTTCAAAGATTTGCTTATTCAGTAACTGGGCCTCTGGACTCTCA 728301 Query 76070 AAAGGATAATGTAA--AAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAG 76127 ||||||| || | | ||| ||||| || || || || || ||||| ||||| ||||| | Sbjct 728302 AAAGGAT-ATCTCATCAAG-ATAAAAGCGTCGGCCAGACCTTGAACCCCAATTCCAATGG 728359 Query 76128 GTCTATGTCTCTTATTGGA 76146 | | ||| | ||||| || Sbjct 728360 GGCGATGGCGTTTATTTGA 728378 Score = 87.8 bits (96), Expect = 3e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 76489 CTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAA 76548 ||| | ||| |||| | | ||||| | |||||||| ||||||||||| ||||||| Sbjct 734913 CTTATTTCTCCCATACTTTTCATATAGCTTCTCAAATTCTTCTCCCCAAACTTCATCCAG 734972 Query 76549 ACCAGGACATTCATTCGGACACATCAATGACCACTC 76584 |||||||| ||||| ||||||||||||||||| || Sbjct 734973 GCCAGGACACTCATTTGGACACATCAATGACCAGTC 735008 >seq75 Length=11204613 Score = 116 bits (128), Expect = 5e-21 Identities = 100/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 |||||||| ||||| | ||| |||||||||||||| || ||||| ||||| || || ||| Sbjct 8448222 TCATCTCTGCTAATCAGTTCATTAGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTCTTG 8448281 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 ||||| ||||| | || || || ||||||||||| || |||||||| || || || || Sbjct 8448282 AGCCAGAATATTGATGCAAACGAGCCAGAAAAGAAGATTCCTTCTACTGCTGCAAAGGCT 8448341 Query 46774 ACAA 46777 |||| Sbjct 8448342 ACAA 8448345 >seq199 Length=4383281 Score = 109 bits (120), Expect = 8e-19 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 |||||||| || || | ||| || ||||| || || |||||||| || || | ||| || Sbjct 4204741 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGACCTCTCTTCTTC 4204682 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 ||||| |||||||| || |||||||| || ||||| || ||||||||||| || || || Sbjct 4204681 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGCC 4204622 Query 46774 ACAAGTCT 46781 |||| ||| Sbjct 4204621 ACAACTCT 4204614 >seq44217 Length=341162 Score = 93.3 bits (102), Expect = 6e-14 Identities = 212/314 (68%), Gaps = 19/314 (6%) Strand=Plus/Minus Query 44411 TTGTACTTCCTCTAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATC 44470 ||| ||||| |||| || || ||| | || |||| | | || || || || |||| || Sbjct 123247 TTGAACTTCTTCTATTTCTGGGTAAAAAATTCGTTCACAAATGAGCTGTGCAATTCGGTC 123188 Query 44471 ACCTGTATTTATTTTAAAGGTATCTTTTCCATTATTGATCAAAATTACTCCAATGTTCCC 44530 |||| | || | || ||| | ||||| ||| ||| | | | || |||| || || Sbjct 123187 ACCTTTTTTAACTTCAAACTTTTCTTTGCCAAAATTAAATAGTACAACACCAACATTTCC 123128 Query 44531 CCTATAATCTTCATCTATTACTCCACCTCCCACATCAATAC-----CTTTTAGAGAAAGA 44585 ||||||||||||||||| || ||| |||| ||||| ||| |||| || | Sbjct 123127 TCTATAATCTTCATCTATGACACCAGCTCCTACATC--TACGAAGTGTTTTGCAGCCAAG 123070 Query 44586 CCCGATCTAGGCGCTATTCTTCCATAA----CAGAATTTTGGCATAGACATACGAATATC 44641 || || | || |||| |||||||||| ||||| || | || || |||| || Sbjct 123069 CCAGAACATGGAGCTACTCTTCCATAACACCCAGAA----GGAAGAGCTATCTGAATGTC 123014 Query 44642 TGTTTTAATCAACCGTCTTTCTCC--AGGAGGGATAGTATAATCGTAAGCACTGTATAAA 44699 || || | ||| | |||||||| ||| || | || ||||| || |||||||| | Sbjct 123013 AGTCTTCA-CAA-GGGCTTTCTCCATAGGTGGCACTGTGTAATCATAGGCACTGTACAGG 122956 Query 44700 TCATATCCTGCCGC 44713 || || || ||||| Sbjct 122955 TCGTAGCCCGCCGC 122942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712482132240000