Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apodemus_20sylvaticus_20[genbank_20GCA_5F001305905.1_202015-10-02] 559,629 sequences; 3,758,143,898 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq2130 86.0 4e-12 >seq2130 Length=226486 Score = 86.0 bits (94), Expect = 4e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 34170 GCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGAC 34229 |||| ||||||||| ||| ||| ||| |||||||| ||| |||||| |||||| Sbjct 3103 GCAGGCTCAGCACCCGGTATAAGGTAGACTCTTTCTGGATGCTGTAGTTGGACAGGGTGT 3162 Query 34230 GGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT 34274 || | || |||| ||| ||||| ||||| || ||||||||||||| Sbjct 3163 GGCCATCCTCCAGCTGTTTGCCAGCGAATATCAGCCGCTGCTGGT 3207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 320868494390240