Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apodemus_20sylvaticus_20[genbank_20GCA_5F001305905.1_202015-10-02] 559,629 sequences; 3,758,143,898 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq7634 93.3 3e-14 >seq7634 Length=216425 Score = 93.3 bits (102), Expect = 3e-14 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 |||||||||| || || ||||| || | || ||||| || ||||| | |||||||||| Sbjct 206346 TGGCCTTTGCTGCGGTGGAAGGGATCTTCTTCTCTGGTTCTTTTGCATCGATATTCTGGC 206405 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 | |||||||| || |||||||| | |||||||||| ||| | |||||| | |||| Sbjct 206406 TCAAGAAACGGGGACTGATGCCAGGCCTTACGTTTTCCAATGAGCTTATTAGCAGAGACG 206465 Query 22868 A 22868 | Sbjct 206466 A 206466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 353803916412487