Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apodemus_20sylvaticus_20[genbank_20GCA_5F001305905.1_202015-10-02] 559,629 sequences; 3,758,143,898 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq7634 100 3e-16 >seq7634 Length=216425 Score = 100 bits (110), Expect = 3e-16 Identities = 103/132 (78%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 93116 TCGTCTCGTGATATCAA-CTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTT 93174 ||||||| || || || ||||||| || || | ||||| | |||||| |||||||| Sbjct 206466 TCGTCTC-TGCTAATAAGCTCATTGGAAAACGTAAGGCCTGGCATCAGTCCCCGTTTCTT 206408 Query 93175 GAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGC 93234 |||||| ||||| || |||||| |||||| || || || |||||||| || ||||| || Sbjct 206407 GAGCCAGAATATCGATGCAAAAGAACCAGAGAAGAAGATCCCTTCCACCGCAGCAAAGGC 206348 Query 93235 CACAATACGTTC 93246 ||||| ||||| Sbjct 206347 CACAACTCGTTC 206336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552965356841960