Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apodemus_20sylvaticus_20[genbank_20GCA_5F001305905.1_202015-10-02] 559,629 sequences; 3,758,143,898 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq5525 89.7 7e-13 >seq5525 Length=785100 Score = 89.7 bits (98), Expect = 7e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 48075 ACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTT 48134 |||||| || || | |||||||||||||||||||||| |||| || | || ||||| || Sbjct 300994 ACCATAGGGTGACCTTGGATAGAAAGGTGTGGTCTCTTTCTGGGGTATTTCCTGCACTTT 300935 Query 48135 ACCATAAAGTTCACTGGTGGATGCTTGATAGA 48166 |||||||||||||| || || || || |||| Sbjct 300934 TCCATAAAGTTCACTTGTCGAGGCCTGGTAGA 300903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 660839025430280