Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apodemus_20sylvaticus_20[genbank_20GCA_5F001305905.1_202015-10-02] 559,629 sequences; 3,758,143,898 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq4803 86.0 5e-12 >seq4803 Length=331686 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 131041 GCTAGCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGC 131100 ||| ||||||| ||||| |||||||||||||| ||||| ||||||||| | || Sbjct 150223 GCTGGCTTCCAGGGCTCCATAATAAATGGTTTCAAAGATTTGCTTATTTAATAACTGGGC 150164 Query 131101 TTGGTTGCTCTCGTAAGGAAATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCC 131160 || |||||| | ||| || |||| | || ||||| ||||| |||||||||| ||| Sbjct 150163 TTCTGGGCTCTCAAAGGGATATCTCATCAGGATGAAAGCATCTGCTAGACCCTGTACCCC 150104 Query 131161 AA 131162 || Sbjct 150103 AA 150102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422036144087448