Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castor_20canadensis_20[refseq_20GCF_5F001984765.1_202017-02-04] 21,157 sequences; 2,518,306,565 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq15962 361 7e-95 seq15872 358 8e-94 seq3369 322 6e-83 seq606 116 5e-21 seq3106 114 2e-20 seq1134 109 7e-19 seq1596 107 2e-18 seq2418 102 1e-16 seq9485 100 4e-16 seq2406 98.7 1e-15 >seq15962 Length=33107 Score = 361 bits (400), Expect = 7e-95 Identities = 618/895 (69%), Gaps = 16/895 (2%) Strand=Plus/Plus Query 33235 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 33291 |||| |||||| |||| || | |||| ||| ||| || ||||| |||||||| Sbjct 15201 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTAGGACTCGACATCACTCCCATCC 15260 Query 33292 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 33351 || || || || || | || || || || ||||| || ||||||| || || || | Sbjct 15261 GCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGAGAAATGTTCT 15320 Query 33352 CCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCA 33411 ||||||| ||||| ||||| || || ||| || |||| |||| || || | Sbjct 15321 CCATGAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGCTCCAGCATAA 15380 Query 33412 ATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 33471 || ||||| || || || || || ||||| | |||||||| || || || | Sbjct 15381 GCCTGTCTGCCACAAACTCAATGTACTGCTTCATTAAAGTGCAATTCATGCCAATAAGCT 15440 Query 33472 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAA 33531 | || || | ||| | | || | || |||||||| || ||||| | || || Sbjct 15441 TCACGGGCAAGGCCTCCGGGAGGGACTCCTGTTCAATCCTAACAGCATTGATAATTATTT 15500 Query 33532 ATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAAT 33591 | | || | | || | |||| |||||| | ||||| ||||||| || | || | Sbjct 15501 CTTTTACTCTCTGCTCCCACGGTTTATGTAACAGGTGTTTGAACATCAGGCAGGAAAAGT 15560 Query 33592 CGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTA 33651 | ||||| | ||||| || || ||||| | || || ||||||||||| || ||||||| Sbjct 15561 CACAGTGTAAGCCCTCATCCCTGCTAATAAGCTCATTGGAAAACGTGAGCCCTGGCATTA 15620 Query 33652 GGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTA 33711 | || || || || ||||| ||||| || || || || || ||||||||||||||||| | Sbjct 15621 GTCCTCGTTTCTTGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCA 15680 Query 33712 CTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC---TGTCATGTATCCACTTTT 33768 || |||||||| || |||||||| ||| |||| ||||| Sbjct 15681 AGGCGGCAAAGGC-------CTTTCTCCATAGGTGGCCTCTTTGTCCCCAATCCAACGCA 15733 Query 33769 GAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGt 33828 ||||| || |||||||| || ||||||||||| |||| |||||||| |||||| | | Sbjct 15734 AGGCCCAGTCTGCCTTCTTCTTCACACAAGGCATTGTTTAAATGGCATTGAAGAGAAATT 15793 Query 33829 ttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAA 33888 |||| || |||||||| ||||| || || | ||||| |||||||| ||||| | Sbjct 15794 CCCTTTCTTTGGGATCTTTAATGTAAGTGTCAATAAGGAGACTGTACATTTCAGAATGTA 15853 Query 33889 TGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTG 33948 ||||||| ||||| || || || || |||||||| | || || ||||| ||||||||| Sbjct 15854 TGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATTTGCACTTCTT 15913 Query 33949 TACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCA 34008 | |||||| || | ||||||||||||||||| |||||||| |||||||| || || | Sbjct 15914 GGCTAAATCGCTCCACCAAATTTTCATTCACTATGCCATCACTAGCTGCAAAGAAAGCGA 15973 Query 34009 ATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTT 34068 ||||| ||| || ||| | || || || | | | || | | ||| || | Sbjct 15974 GAACATGAGATATGAAGTATCTCTCCTCCGGCTTCAACAGCTCTCAGTGCTGGATGTCCT 16033 Query 34069 TAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACAT 34123 | || | |||||| || || ||||||| || || ||||| ||| |||||||| Sbjct 16034 TGGAAAGATCCACCTCCTCAGCTGTCCAGAAGGAAGCCTCGGCC---TTATACAT 16085 >seq15872 Length=96178 Score = 358 bits (396), Expect = 8e-94 Identities = 591/851 (69%), Gaps = 4/851 (0%) Strand=Plus/Plus Query 33276 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCT 33335 ||||| ||| |||| | || || || || || | || || || || ||||| || ||| Sbjct 39919 GACATCACTACCATCTGCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCT 39978 Query 33336 TCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAAT 33395 |||| || || || |||||||| ||||| ||||| || || || || |||| Sbjct 39979 TCCAGAGAAATGTTCTCCATGAAGTCAAATGGATTCTCTACTCTGAAAGCCTTGCTAAAA 40038 Query 33396 CCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAA 33455 |||| || || | || ||||| || || || || || ||||| | ||| Sbjct 40039 CCCAGCTCCAGCATAAGCCTGTCTGCCACAAACTCAATGTACTGCTTCATTAAAGTGCAA 40098 Query 33456 TTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACC 33515 ||||| || || || || ||||| | ||| | || || || || |||||||| || Sbjct 40099 TTCATGCCAATAAGCTTCACTGGCAAGGCCTCCGTGAGGAACTCCTGTTCAATCCTAACA 40158 Query 33516 GCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAAC 33575 ||||| | || | | | || | | || |||| ||||| | ||||| ||| Sbjct 40159 GCATTGATAATTACTTCTTTTACTCTCTGCTCCAACGGTTTATGTAGCAGGTGTTTGAAC 40218 Query 33576 ATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAAC 33635 |||| || || || || ||||| | ||||| | || ||||| | || || |||||| Sbjct 40219 ATCAGGCAGGCAAAGTCACAGTGTAAGCCCTCACCCCTGCTAATAAGCTCATTGGAAAAC 40278 Query 33636 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAA 33695 ||||| || ||||| || || || || || ||||| ||||| || || || || || ||| Sbjct 40279 GTGAGCCCTGGCATCAGTCCTCGTTTCTTGAGCCAGAATATTGATGCAAAAGAACCAGAA 40338 Query 33696 AAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC---TG 33752 ||||||||| |||| || || |||||||| || | || |||||||| ||| || Sbjct 40339 AAGAAGATTTCTTCCACAGCGGCAAAGGCTGTA-GCCTTTCTCCATAGGTGGCCTCTTTG 40397 Query 33753 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 33812 || ||||| ||||| || |||||||| || ||||||| ||| |||| ||| Sbjct 40398 TCCCCAATCCAACGCAAGGCCCAGTCTGCCTTCTTCTTCACACAAGACATTGTTTAAATG 40457 Query 33813 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTA 33872 ||||| |||| | | | |||| || |||||||| ||||| || || | ||||| Sbjct 40458 GCATTGAAGAAAAATTCCCTTTCTTTGGGATCTTTAATGTAAGTGTCAATAAGGAGACTG 40517 Query 33873 TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCG 33932 |||||||| ||||| | |||||| ||||| || || ||||| |||||||| || || Sbjct 40518 TACATTTCAGAATGTACGTTTTCCATGGCAATTTGTAATCCATAGAAACAGTGGGCTTCT 40577 Query 33933 GTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTG 33992 ||||| ||||||||| | |||||| || | ||||||||||||||||| ||||||||| Sbjct 40578 GTAATTTGCACTTCTTGGCTAAATCGCTCCACCAAATTTTCATTCACTATGCCATCACTG 40637 Query 33993 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTC 34052 |||||||| || || | ||||| ||| || ||| | || || || | || | | Sbjct 40638 GCTGCAAAGAAAGCAAGAACATGAGATATGAAGTATCTCTCCTCCGGCTTCAGCAGCTCC 40697 Query 34053 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 34112 || | | ||| || || || | |||||| || || ||||||| || || ||||| ||| Sbjct 40698 CAGTGCTGGATGTCCTTGGAAAGATCCACCTCCTCAGCTGTCCAGAAGGAAGCCTCGGCC 40757 Query 34113 TTTTTATACAT 34123 || ||||| || Sbjct 40758 TTCTTATATAT 40768 >seq3369 Length=196643 Score = 322 bits (356), Expect = 6e-83 Identities = 637/936 (68%), Gaps = 15/936 (2%) Strand=Plus/Minus Query 33236 TTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGAG---ACATAACTCCCATTTT 33292 ||| |||||| |||| || | |||| ||| ||| || |||| |||||||| Sbjct 92263 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTAGGACTCCACATCACTCCCATCCG 92204 Query 33293 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33352 || | ||||| || | || || || ||||| || ||||||| || || || || Sbjct 92203 CTGACACTCACCTACTCTCTTA---AAGAAGTTAGTCTTCCCTTCCAGAGAAATGTTCTC 92147 Query 33353 CATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCAA 33412 |||||| ||||| ||||| || || ||| || |||| |||| || || | Sbjct 92146 CATGAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGCTCCAGCATAAG 92087 Query 33413 TCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTTT 33472 || ||||| || || || || || ||||| | || ||||| | || | || Sbjct 92086 CCTGTCTGCCACAAACTCAATGTACTGCTTCATTAAAGTGCAGTTCATGTCAATAAACTT 92027 Query 33473 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAAA 33532 ||||| | ||| | || || | || ||||| || || ||||| | || | Sbjct 92026 CACTGGCAAGGCCTCCGTGAGGAGCTCCTGTTCCATCCTAACAGCATTGATAATTACTTC 91967 Query 33533 TCTAACGGTTTCTTCACTCG--GTGGATGTAATAAATGTTTAAACATCAAACATGCGAAA 33590 | | || | ||| | | || || ||| | | ||| | ||||||| || || || Sbjct 91966 TTTTAC--TCTCTGCTC-CGACGTTTATGGAGCAGGTGTCTGAACATCAGGCAGGCAAAG 91910 Query 33591 TCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATT 33650 || ||||| | |||||| ||||| |||| | || || |||||||| || || ||||| Sbjct 91909 TCACAGTGTAAACCCTCATCTCTGATAATAAGCTCATTGGAAAACGTAAGCCCTGGCATC 91850 Query 33651 AGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCT 33710 || | || || || ||||| ||||| || || || || ||||||||||||| |||||| Sbjct 91849 AGTCTTCGTTTCTTGAGCCAGAATATTGACGCAAAAGAACCGGAAAAGAAGAGTCCTTCC 91790 Query 33711 ACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGT--CATGTATCCACTTTT 33768 | || |||||||| | || | |||||||| ||| || | | ||||| Sbjct 91789 AGGGCGGCAAAGGCTACAACACGTTCTCCATAGGTGGCCCTTTGCCCCCAATCCAACGCA 91730 Query 33769 GAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGt 33828 |||||||| |||||||| || ||||||||||| || || |||||||| |||||| | | Sbjct 91729 AGGCCCAATCTGCCTTCTTCTTCACACAAGGCATTGTCTCAATGGCATTGAAGAGAAATT 91670 Query 33829 ttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAA 33888 |||| || |||||||| ||||| || || | ||||| |||||||| ||||| | Sbjct 91669 CCCTTTCTTTGGGATCTTTAATGTAAGTGTCAATAAGGAGACTGTACATTTCAGAATGTA 91610 Query 33889 TGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTG 33948 ||||||| ||||| || || || || ||||||| | | || ||||| ||||||||| Sbjct 91609 TGTTTTCCATGGCAATTTGGAAGCCACAGAAACAGCGGACTTCTGTAATTTGCACTTCTT 91550 Query 33949 TACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCA 34008 | |||||| || | ||||||||||||||| ||||||||||||||||| || || | Sbjct 91549 GGCTAAATCGCTCCACCCAATTTTCATTCACTAGGCCATCACTGGCTGCAAAGAAAGCGA 91490 Query 34009 ATAC--ATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATC 34066 || ||| ||| || ||| | || || || | || | || | ||| || Sbjct 91489 GAACGGATGAGCTATGAAGTATCTCTCCTCCGGCTTCAGCACCTCCCGGGGCTGGATGTC 91430 Query 34067 TTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATT 34126 || || | |||||| || || ||||||| | || ||||| ||||| |||||||| | Sbjct 91429 CTTGGAAAGATCCACCTCCTCAGCTGTCCAGAGGGAAGCCTCGGCCTTCTTATACATCTG 91370 Query 34127 CCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162 |||||| || |||| | ||| || || || ||||| Sbjct 91369 CCAGATATCGTGATCCTCGATAGGAAAGATGACAAA 91334 >seq606 Length=273764 Score = 116 bits (128), Expect = 5e-21 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447 || || |||||||| ||||| ||||| ||||| || || ||||||||||||||||| | Sbjct 19210 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTACTGGTATACGGTTCAATG 19151 Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507 || |||||||| || | || ||||||||||| ||||| ||||| || || | | |||| Sbjct 19150 GATTCATTATTCCCAAGGATCTGAGCAGTTGAGGCAGTGGGCATTGGGGCAATAAGTAAA 19091 Query 62508 CTATTTCTAAGACCGTA 62524 || ||||| | ||| || Sbjct 19090 CTGTTTCTTATACCATA 19074 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 62113 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62172 |||| || || || |||||||| || |||||| ||| | || || || |||||||| | Sbjct 2363 TCCAGCCATAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATATGGATGT 2304 Query 62173 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62232 ||| ||| ||||||||||| ||||| || || || || || ||||| || | | || | Sbjct 2303 TCAAAGACTGACTTTGATCAATGAAAGCACCTCTCTCAGCTGCCATCTTGAGAACAGTTT 2244 Query 62233 TTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62283 | |||| |||||||| | ||| ||||||| | |||| | || || |||| Sbjct 2243 TCTGTGAGATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 2193 Score = 98.7 bits (108), Expect = 1e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 63267 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGT 63326 || |||||||| || ||||| ||||||||||| || | || ||||| |||| | ||| Sbjct 42091 ACACGTTTCATGAAAAGATCTGGAATCCAAAGGGCAAAGAAAAGATCCCTTGCACGCTGT 42150 Query 63327 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 63386 ||||| |||||||| ||||| || | ||| |||||| | | || || | ||||| || Sbjct 42151 TCCTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAGTGCCAAGGC 42210 Query 63387 TCCAAGTATATGGCCATAACTCCAGGCCG 63415 |||| ||| || || | ||||||| || Sbjct 42211 TCCAGGTAAATAGCAAATGCTCCAGGACG 42239 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/193 (70%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 62626 CATATGTATCATATGGTCC---TTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCAC 62682 |||| || |||||||| || |||||| ||||| | ||| || || || || || | Sbjct 37985 CATAGGTCTCATATGGGCCAAGTTCCTTG---GCTAGGTCACAGCTGGCTTCCAAGGCTC 38041 Query 62683 CGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATG 62742 | |||||||| ||||||||||| | |||||| | || || || | || ||||| | Sbjct 38042 CATAATAAATAGTTTCAAAGATTTGCTTATTCAATAACTGGGCCTCTGCACTCTCAAAAG 38101 Query 62743 GATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTAT 62802 |||| | | || ||||| || || |||| ||||| || ||||| || || || | || Sbjct 38102 GATACCTCATCAGGATAAAAGCATCTGCTAGACCTTGTACTCCAATTCCAATGGGGCGAT 38161 Query 62803 GTCTCTTATTAGA 62815 | | ||||| || Sbjct 38162 GGCGTTTATTTGA 38174 Score = 82.4 bits (90), Expect = 1e-10 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 63507 ATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 63566 || |||| ||| | || |||||| ||| | | | ||| |||||||| || ||| Sbjct 45168 ATGTAGCTGCCAGTAGCCCGAATACAACTCACAGCAACACCAATTCCCCCAGCAGACTTA 45227 Query 63567 GAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATG 63626 || || ||||| ||| | |||| || ||||| |||||||| ||||||||||| |||| Sbjct 45228 GAAATCAATGCACATTGCTTTAGAGTATCATAAATGCCTTCAATGCTATCATCTTTCATA 45287 Query 63627 TTAAGTAGAAAACAGCTA 63644 | || || ||||||||| Sbjct 45288 CTCAGAAGGAAACAGCTA 45305 >seq3106 Length=183861 Score = 114 bits (126), Expect = 2e-20 Identities = 181/257 (70%), Gaps = 7/257 (3%) Strand=Plus/Minus Query 31299 TCCTGTTGATCCAAACCCT--TGATCTCCTCTATCTGTACTATCTAGAGATTGTACTTCT 31356 ||| || |||||||| ||| ||| | ||| | | ||| ||| | ||| |||||| Sbjct 112301 TCCAGTGGATCCAAAACCTCCTGAACCCCTTT--CAGTATCATCCAACACTTGAACTTCT 112244 Query 31357 TCAAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCTCCAGTATTT 31416 || | |||||||||| | || |||| | | || |||||||| |||| ||| || | ||| Sbjct 112243 TCTATTTCTGGATAAAAAATCCGTTCACAAATGAGCTGAGCAATTCGATCACCCTTTTTT 112184 Query 31417 ACATTAAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCCCCTATAATCT 31476 || | ||| | ||| ||| ||| | || || || || | ||||| ||||||||| Sbjct 112183 ACTTCAAATTTCTCTTTGCCAAAATTGAACAGTATAACACCAACATTTCCTCTATAATCT 112124 Query 31477 TCGTCTATTACACCGCCTCCTATATCAAT---GCCTTTTAGGGACAGACCAGACCTAGGA 31533 || ||||| ||||| |||||| ||| || | |||| | || ||||| | ||| Sbjct 112123 TCATCTATGACACCAGCTCCTACATCTATGAAGTGTTTTGCAGCCAAGCCAGAACGTGGA 112064 Query 31534 GCTATTCTACCATAGCA 31550 |||| ||| |||||||| Sbjct 112063 GCTACTCTTCCATAGCA 112047 >seq1134 Length=343165 Score = 109 bits (120), Expect = 7e-19 Identities = 144/199 (72%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 31355 CTTCAAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCTCCAGTAT 31414 |||| | |||||||||| | || |||| | | || |||||||| |||| ||| || | | Sbjct 35234 CTTCTATTTCTGGATAAAAAATCCGTTCACAAATGAGCTGAGCAATTCGATCACCCTTTT 35293 Query 31415 TTACATTAAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCCCCTATAAT 31474 |||| | ||| | ||| ||| ||||| || || || || || ||||| ||||||| Sbjct 35294 TTACTTCAAATTTCTCTTTGCCAAAATTAAACAGTATAACACCAATATTTCCTCTATAAT 35353 Query 31475 CTTCGTCTATTACACCGCCTCCTATATCAAT---GCCTTTTAGGGACAGACCAGACCTAG 31531 |||| ||||| ||||| ||||| |||| || | |||| | || ||||| | | Sbjct 35354 CTTCATCTATGACACCAGCTCCTGTATCTATGAAGTGTTTTGCAGCCAAGCCAGAACGTG 35413 Query 31532 GAGCTATTCTACCATAGCA 31550 |||||| ||| |||||||| Sbjct 35414 GAGCTACTCTTCCATAGCA 35432 >seq1596 Length=124397 Score = 107 bits (118), Expect = 2e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 188489 GTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTT 188548 |||||||||||||||| ||| || | |||||||| | || |||||||||| ||| Sbjct 80488 GTTACTTTCTATGATGTATATATTATTCTGCAAGCTTTTGTACTGTCTACTGCAGTATTT 80429 Query 188549 CTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGG 188607 |||| | ||||| || |||||||||||| |||||||||||||| ||| ||| | |||| Sbjct 80428 CTTGGTTTGACTGTATATACTCTACAATCTAAGAGAGATTTCAGCAAATTTGGAGCAGG 80370 Score = 91.5 bits (100), Expect = 2e-13 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 188172 TGCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCAC 188231 ||||||||||||||||| ||||||||||||| ||| | ||||| ||||||||||||||| Sbjct 92045 TGCTCCTCCATCGAGGATGACTTCAACTATGGCAGTTGCGTGGCCTCTGCCAGCGTGCAC 91986 Query 188232 ATACGAATGG 188241 || || |||| Sbjct 91985 ATCCGGATGG 91976 >seq2418 Length=977819 Score = 102 bits (112), Expect = 1e-16 Identities = 95/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||| || || ||||| | || || ||||||||||| || ||||| || || || || | Sbjct 180827 CCTCATCCCTGCTAATAAGCTCATTGGAAAACGTGAGCCCTGGCATCAGTCCTCGTTTCT 180886 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 | ||||| ||||| || || || || || ||||||||||||||||| || || ||||||| Sbjct 180887 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACGGCGGCAAAGG 180946 Query 33724 C 33724 | Sbjct 180947 C 180947 >seq9485 Length=81507 Score = 100 bits (110), Expect = 4e-16 Identities = 148/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 31347 TTGTACTTCTTCAAGTTCTGGATAATATA-TACGTTGATAGATTAGCTGAGCTATTCTAT 31405 ||| |||||||| | |||||||||| | | | |||| | | || || ||||| ||| || Sbjct 928 TTGAACTTCTTCTATTTCTGGATAAAAAAATCCGTTCACAAATGAGTTGAGCAATTGGAT 869 Query 31406 CTCCAGTATTTACATTAAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTC 31465 | || | ||||| ||||| | ||| ||| ||||| || || || || | |||| Sbjct 868 CACCCTTTTTTACTTTAAATTTCTCTTTGCCAAAATTAAACAGTATAACACCAACATTTC 809 Query 31466 CCCTATAATCTTCGTCTATTACACCGCCTCCTATATCAAT---GCCTTTTAGGGACAGAC 31522 ||||||||||| ||||| ||||| |||||| ||| || | |||| | || | Sbjct 808 TTCTATAATCTTCATCTATGACACCAGCTCCTACATCTATGAAGTGTTTTGCAGCCAAGC 749 Query 31523 CAGACCTAGGAGCTATTCTACCATAGCA 31550 |||| | ||||||| ||| |||||||| Sbjct 748 CAGAACGTGGAGCTACTCTTCCATAGCA 721 >seq2406 Length=770489 Score = 98.7 bits (108), Expect = 1e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 33606 TCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33665 || ||||| || || | || || ||||| |||||||| ||||| || || | ||| || Sbjct 395248 TCATCTCTGCTGATGAGCTCATTGGAAAAGGTGAGTCCAGGCATGAGACCTCTCTTCTTT 395189 Query 33666 AGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33724 ||||| ||||| | ||| || ||||| || ||||| | ||||||||| ||||||||||| Sbjct 395188 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAACTCCTTCTACAGCAGCAAAGGC 395130 Score = 93.3 bits (102), Expect = 5e-14 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 33966 AAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 34025 ||||||||||| || ||||||||||||||||||||||| || || | || |||||| Sbjct 388689 AAATTTTCATTTACAATTCCATCACTGGCTGCAAAAAAGGCTAAAATGTGAGAGATAAAA 388630 Query 34026 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATA 34074 ||||| || |||||| | ||||| ||||| | | || ||| || |||| Sbjct 388629 TATTTCTCATCTGGTTTAAGTTTGTTCCAGTGAGGGAGATCCTTTGATA 388581 Score = 91.5 bits (100), Expect = 2e-13 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 34080 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 34139 || |||||| ||||||| || ||||||| ||| | ||||||||| ||||| || ||| | Sbjct 385358 ACCTCTTCCGCTGTCCAGAAGGATGCCTGTGCTTGTTTATACATTTTCCAAATATCAGGG 385299 Query 34140 TATTGGATTGGGAAAATAACAAATC 34164 || |||||||||||||| ||||||| Sbjct 385298 TACTGGATTGGGAAAATGACAAATC 385274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629651036862960