Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castor_20canadensis_20[refseq_20GCF_5F001984765.1_202017-02-04] 21,157 sequences; 2,518,306,565 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq3495 84.2 2e-11 seq304 84.2 2e-11 >seq3495 Length=1667739 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||||||||| | || || || || | || || || | |||||| | ||| | || | Sbjct 879699 CAAAATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAGCC 879640 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 | |||||||||||| | || ||| ||||| || |||||||| || || || || Sbjct 879639 CAGTGACACCATCGAGAATGTGAAAGCCAAGATCCAGGATAAAGAAGGCATTCCCCCTGA 879580 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 || || || ||||| | | ||||| || || ||||||| | | | | ||||| Sbjct 879579 CCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTTTCTGACTA 879520 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || || |||||||| || |||| |||||||| Sbjct 879519 CAATATCCAGAAAGAATCCACCCTCCACCTGGTCCT 879484 >seq304 Length=872862 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||||||||| | || || || || | || || || | |||||| | ||| | || | Sbjct 181289 CAAAATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAGCC 181348 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 | |||||||||||| | || ||| ||||| || |||||||| || || || || Sbjct 181349 CAGTGACACCATCGAGAATGTGAAAGCCAAGATCCAGGATAAAGAAGGCATTCCCCCTGA 181408 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 || || || ||||| | | ||||| || || ||||||| | | | | ||||| Sbjct 181409 CCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTTTCTGACTA 181468 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || ||||| || || |||| |||||||| Sbjct 181469 CAACATCCAGAAAGAGTCCACCCTCCACCTGGTCCT 181504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478535811745040