Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castor_20canadensis_20[refseq_20GCF_5F001984765.1_202017-02-04] 21,157 sequences; 2,518,306,565 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1696 84.2 2e-11 >seq1696 Length=1012329 Score = 84.2 bits (92), Expect = 2e-11 Identities = 154/226 (68%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 126888 CACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCA 126947 |||| || | || |||| | | ||| | || ||||| |||||||| ||||| || | Sbjct 926842 CACCACGAAGTCTCAACCCAAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCTGATA 926901 Query 126948 TCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTA 127007 || || ||| || || || || ||||| |||||| || |||||||| ||||| | Sbjct 926902 AAGTACGTCCATCTTCCAGTTGCTTACCAGCAAAGATCAGTCTTTGCTGATCCGGAGGAA 926961 Query 127008 TGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTT 127067 | || ||||| ||| ||| || ||||| | ||| | || |||| ||| || | Sbjct 926962 TTCCTTCCTTATCCTGGATCTTGGCCTTGACATTTTCTATAGTATCCGAGGGCTCAACCT 927021 Query 127068 CGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | | || || || || || || || ||||| ||||||||||| Sbjct 927022 CAAGCGTGGTGGTCTTCCCAGTAAGGGTGTTTACGAAAATCTGCAT 927067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475375047869680