Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castor_20canadensis_20[refseq_20GCF_5F001984765.1_202017-02-04] 21,157 sequences; 2,518,306,565 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq15962 86.0 8e-12 seq15872 86.0 8e-12 >seq15962 Length=33107 Score = 86.0 bits (94), Expect = 8e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 102544 AGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTCTTCGAAA 102603 ||||||||||||||||||||||||||||| || || |||||||| |||||||| || | Sbjct 15341 AGAATCCATTTGACTTCATGGAGAACATTTCTCTGGAAGGGAAGACTAACTTCTTTGAGA 15282 Query 102604 AGAGGGTTGGGGACTAT 102620 |||| || || || ||| Sbjct 15281 AGAGAGTAGGCGAGTAT 15265 >seq15872 Length=96178 Score = 86.0 bits (94), Expect = 8e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 102544 AGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTCTTCGAAA 102603 ||||||||||||||||||||||||||||| || || |||||||| |||||||| || | Sbjct 40015 AGAATCCATTTGACTTCATGGAGAACATTTCTCTGGAAGGGAAGACTAACTTCTTTGAGA 39956 Query 102604 AGAGGGTTGGGGACTAT 102620 |||| || || || ||| Sbjct 39955 AGAGAGTAGGCGAGTAT 39939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620578236913040