Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castor_20canadensis_20[refseq_20GCF_5F001984765.1_202017-02-04] 21,157 sequences; 2,518,306,565 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq15962 86.0 7e-12 seq15872 86.0 7e-12 >seq15962 Length=33107 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 116985 ATAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCAT 117044 ||| || || |||| ||||||||||||||| |||||||| || || |||||| ||||| Sbjct 15265 ATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGAGAAATGTTCTCCAT 15324 Query 117045 AAAGTCAAATGGATTCT 117061 |||||||||||||||| Sbjct 15325 GAAGTCAAATGGATTCT 15341 >seq15872 Length=96178 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 116985 ATAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCAT 117044 ||| || || |||| ||||||||||||||| |||||||| || || |||||| ||||| Sbjct 39939 ATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGAGAAATGTTCTCCAT 39998 Query 117045 AAAGTCAAATGGATTCT 117061 |||||||||||||||| Sbjct 39999 GAAGTCAAATGGATTCT 40015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589824772202680