Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castor_20canadensis_20[refseq_20GCF_5F001984765.1_202017-02-04] 21,157 sequences; 2,518,306,565 total letters Query= NC_019559.1 Length=202946 Score E Sequences producing significant alignments: (Bits) Value seq1040 138 1e-27 >seq1040 Length=283773 Score = 138 bits (152), Expect = 1e-27 Identities = 218/310 (70%), Gaps = 2/310 (1%) Strand=Plus/Minus Query 153702 AGTTGAAGTGGTAACACAGGATGTAAATTCATCACTTCGAT-CGCCCGCGTCCCTCAGAT 153760 ||| |||||||| || ||||||| ||| | | | || | || || ||| | ||| Sbjct 104515 AGTGGAAGTGGTGACCCAGGATG-AAAGAGAGCTGCTGAATACACCTGCATCCTTACGAT 104457 Query 153761 GCTCGTTGAAAACTACACAAGAACCTTTAATTGTAACGTGGCAAAAGAAGAAAGCTGTAG 153820 | || | ||||| | || ||| | || ||||| || ||||| || |||||||||||| Sbjct 104456 GTTCTCTACAAACTTCCCAGGAAGCCTTGATTGTGACATGGCAGAAAAAGAAAGCTGTAA 104397 Query 153821 GTCCAGAAAATATGGCCACGTATAGCAAAGCCCACGGTGTAGTGCTTCAGCCCACATATA 153880 | |||||||| ||| || || ||||| ||| || || ||| | ||||| | |||| Sbjct 104396 GCCCAGAAAACATGATTACTTACAGCAAGAACCATGGGGTTGTGGTCCAGCCTGCCTATA 104337 Query 153881 AAGATAGAATTAATATAACCGAATTAGGTCTTTTAAACAGTAGTATAACGTTTTGGAATG 153940 | || || | || || || || | || || ||| || || || |||||| Sbjct 104336 AGGACAGGGTCAACATCACTGAGCTGGGACTCCGGAACTCAGCCATTACCTTCTGGAATA 104277 Query 153941 CAACACTGGATGATGAAGGCTGTTATATGTGTCTGTTTAATATGTTCGGTTCTGGTAAGG 154000 ||||| |||| ||||| || ||||| |||||||| || |||||||| |||||||| ||| Sbjct 104276 CAACATTGGAGGATGAGGGGTGTTACATGTGTCTCTTCAATATGTTTGGTTCTGGGAAGA 104217 Query 154001 TATCGGGAAC 154010 | || ||||| Sbjct 104216 TCTCAGGAAC 104207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 649127484710320