Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castor_20canadensis_20[refseq_20GCF_5F001984765.1_202017-02-04] 21,157 sequences; 2,518,306,565 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq17622 84.2 3e-11 >seq17622 Length=151449 Score = 84.2 bits (92), Expect = 3e-11 Identities = 150/212 (71%), Gaps = 18/212 (8%) Strand=Plus/Minus Query 107182 TTATTATTATTCAATACTATTTT----TAATTTGGGATTATAACTAGTtatatcatataa 107237 ||||||||||| | || |||||| || | | ||||||| || |||||| ||| | Sbjct 86462 TTATTATTATTTATTATTATTTTATTATATTATTATATTATAA-TAATTATAT-ATAATA 86405 Query 107238 ttgtatatcatatttttcaacattaataatgttatgtctatatattgatata--tgtaaa 107295 | ||||| ||| || | | |||||||| |||| | | ||| ||||||| | || | Sbjct 86404 TAATATATAATAATTATATATATTAATAA--TTATATATTAATAATGATATAATTATATA 86347 Query 107296 tttttatctaatattagtatttcattataattaaatatatttttgtataatattggctgt 107355 || |||| | |||| |||| ||||| ||| || ||||| ||||| |||| | Sbjct 86346 TTATTATATTTTATT-TTATTATATTAT-ATTTTATTTATTTATGTATTATAT------T 86295 Query 107356 aatttattaaatattaaattatcatctatttC 107387 | |||||| | ||||| ||||| || |||||| Sbjct 86294 ATTTTATTTATTATTATATTATTATTTATTTC 86263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785958488468440