Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castor_20canadensis_20[refseq_20GCF_5F001984765.1_202017-02-04] 21,157 sequences; 2,518,306,565 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1696 95.1 1e-14 seq1660 95.1 1e-14 seq3495 91.5 1e-13 seq606 91.5 1e-13 seq304 91.5 1e-13 seq3540 82.4 7e-11 >seq1696 Length=1012329 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/212 (70%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 131913 AAACCAA-ATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCT 131971 || |||| ||| | | | ||||| ||||||||||||||||| | ||||| |||| Sbjct 926856 AACCCAAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCTGATAAAGTACGTCCATCT 926915 Query 131972 TCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCG 132031 || || || ||||| | | |||| || | || ||||| ||||| || ||||| ||||| Sbjct 926916 TCCAGTTGCTTACCAGCAAAGATCAGTCTTTGCTGATCCGGAGGAATTCCTTCCTTATCC 926975 Query 132032 GTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTT 132091 || || || | | ||| | |||||| | ||||| || || | ||| || Sbjct 926976 TGGATCTTGGCCTTGACATTTTCTATAGTATCCGAGGGCTCAACCTCAAGCGTGGTGGTC 927035 Query 132092 TTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || ||||| || || |||| |||||||||||| Sbjct 927036 TTCCCAGTAAGGGTGTTTACGAAAATCTGCAT 927067 >seq1660 Length=831338 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/214 (70%), Gaps = 1/214 (0%) Strand=Plus/Minus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| || | ||| | | | ||||| ||||||||| ||||||| || ||||| ||| Sbjct 181687 CAACACAAGATGAAGGGTGGACTCCTTTTGAATGGTGTAGTCTGACAAAGTACGTCCATC 181628 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| || || ||||| | | |||| || | || ||||| ||||| || ||||| ||||| Sbjct 181627 TTCCAGTTGCTTACCAGCAAAGATCAGTCTTTGCTGATCCGGAGGAATTCCTTCCTTATC 181568 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 || || || | | ||| | |||||| | | || || |||| ||| | || Sbjct 181567 CTGGATCTTGGCCTTGACATTTTCTATAGTATCCGAGAGTTCAACCTCGAGCGTGATGGT 181508 Query 132091 TTTACCAGTCAGAGTTTTTAT-GAAAATCTGCAT 132123 || ||||| || |||||| | |||||||||||| Sbjct 181507 CTTCCCAGTAAGGGTTTTTTTAGAAAATCTGCAT 181474 >seq3495 Length=1667739 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 |||||||| || ||||||||||| | ||| || |||||| ||||| || || | | Sbjct 879047 GACTCTTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCA 879106 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| || || || || |||||||||||||| || || ||||| Sbjct 879107 AAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTATCCTGGATCTTGGCTTTCACA 879166 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | ||||||||||| | || | || || || ||||| || || Sbjct 879167 TTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTC 879226 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 879227 ACGAAGATCTGCATG 879241 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| || ||||||||||| | ||| || |||||| ||||| || || | | Sbjct 878819 GATTCTTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCA 878878 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| || || || || |||||||||||||| || || ||||| Sbjct 878879 AAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTATCCTGGATCTTGGCTTTCACA 878938 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | ||||||||||| | || | || || || ||||| || || Sbjct 878939 TTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTC 878998 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 878999 ACGAAGATCTGCATG 879013 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| || ||||||||||| | ||| || |||||| ||||| || || | | Sbjct 879274 GATTCTTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCA 879333 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| || || || || |||||||||||||| || || ||||| Sbjct 879334 AAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTATCCTGGATCTTGGCTTTCACA 879393 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | ||||||||||| | || | || || || ||||| || || Sbjct 879394 TTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTC 879453 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 879454 ACGAAGATCTGCATG 879468 >seq606 Length=273764 Score = 91.5 bits (100), Expect = 1e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 147505 TACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTG 147564 |||| || ||||| | ||| |||||||||||||| || ||||| |||||||| ||| Sbjct 40636 TACTCTACTATTTCTGTGCATAGGTTGCTGCATTTGATTGTTCCCAGGTTTTGCTGGTTG 40695 Query 147565 CTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602 || ||||||||||| | |||||| |||||||||| || Sbjct 40696 CTCTTCCGATTGCAGGAATCTTTGTAGAGCATGTATGG 40733 >seq304 Length=872862 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 |||||||| || ||||||||||| | ||| || |||||| ||||| || || | | Sbjct 181942 GACTCTTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCA 181883 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| || || || || |||||||||||||| || || ||||| Sbjct 181882 AAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTATCCTGGATCTTGGCTTTCACA 181823 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | ||||||||||| | || | || || || ||||| || || Sbjct 181822 TTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTC 181763 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 181762 ACGAAGATCTGCATG 181748 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 |||||||| || ||||||||||| | ||| || |||||| ||||| || || | | Sbjct 181486 GACTCTTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCA 181427 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| || || || || |||||||||||||| || || ||||| Sbjct 181426 AAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTATCCTGGATCTTGGCTTTCACA 181367 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | ||||||||||| | || | || || || ||||| || || Sbjct 181366 TTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTC 181307 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 181306 ACGAAGATCTGCAT 181293 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| || ||||||||||| | ||| || |||||| ||||| || || | | Sbjct 181714 GATTCTTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCA 181655 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| || || || || |||||||||||||| || || ||||| Sbjct 181654 AAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTATCCTGGATCTTGGCTTTCACA 181595 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | ||||||||||| | || | || || || ||||| || || Sbjct 181594 TTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTC 181535 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 181534 ACGAAGATCTGCATG 181520 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| || ||||||||||| | ||| || |||||| ||||| || || | | Sbjct 182169 GATTCTTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCA 182110 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| || || || || |||||||||||||| || || ||||| Sbjct 182109 AAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTATCCTGGATCTTGGCTTTCACA 182050 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | ||||||||||| | || | || || || ||||| || || Sbjct 182049 TTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTC 181990 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 181989 ACGAAGATCTGCATG 181975 >seq3540 Length=97209 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| |||| || | | | ||||| || || ||||||||||| || ||| || | Sbjct 53845 CGCAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCA 53786 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| ||||| || || | | |||| || | ||| || || || || |||||||| || Sbjct 53785 TCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTG 53726 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || ||| || | | || | || ||| | |||||||| || | || | Sbjct 53725 TCCTGGATCTTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATG 53666 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || |||||||| || || | ||| |||||||| Sbjct 53665 GTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 53631 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| |||| || | | | ||||| || || ||||||||||| || ||| || | Sbjct 54301 CGCAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCA 54242 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| ||||| || || | | |||| || | ||| || || || || |||||||| || Sbjct 54241 TCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTG 54182 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || ||| || | | || | || ||| | |||||||| || | || | Sbjct 54181 TCCTGGATCTTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATG 54122 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || |||||||| || || | ||| |||||||| Sbjct 54121 GTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 54087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476485154210520