Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castor_20canadensis_20[refseq_20GCF_5F001984765.1_202017-02-04] 21,157 sequences; 2,518,306,565 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq3495 95.1 1e-14 >seq3495 Length=1667739 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || ||||| || ||||||||||| | | |||| | ||||| ||||| || || Sbjct 879499 GTGGATTCTTTCTGGATATTGTAGTCAGAAAGGGTGCGGCCATCTTCCAGCTGCTTGCCT 879558 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | ||||| | ||| || || || || | || |||||||| ||||||| |||| Sbjct 879559 GCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTATCCTGGATCTTGGCTTTC 879618 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| ||| || ||||| || || || | ||||| ||||| || Sbjct 879619 ACATTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 879678 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||| ||||| Sbjct 879679 TTCACGAAGATCTGCAT 879695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424824830266584