Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castor_20canadensis_20[refseq_20GCF_5F001984765.1_202017-02-04] 21,157 sequences; 2,518,306,565 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq2418 86.0 7e-12 >seq2418 Length=977819 Score = 86.0 bits (94), Expect = 7e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 59980 AACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTA 60039 ||||| | |||| ||||| |||||||||||||||||| ||||| || || | | Sbjct 180958 AACGTGTTGTAGCCTTTGCCGCCGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCAA 180899 Query 60040 TTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTT 60099 | ||||||||||| || || || || ||||| || || | || ||||| ||||| ||| Sbjct 180898 TATTCTGGCTCAAGAAACGAGGACTGATGCCAGGGCTCACGTTTTCCAATGAGCTTATTA 180839 Query 60100 CCCGGGACGAGG 60111 | |||| |||| Sbjct 180838 GCAGGGATGAGG 180827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548379735760080