Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cavia_20aperea_20[genbank_20GCA_5F000688575.1_202014-01-21] 3,131 sequences; 2,716,396,567 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq29 84.2 2e-11 >seq29 Length=3441549 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 |||||||| || || |||||| || | |||||||| || |||||| | || ||||||||| Sbjct 3375266 GCCTTTGCTGCCGTGGAAGGCATCTTTTTTTCTGGTTCTTTTGCGTCGATCTTCTGGCTG 3375207 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGA 22868 |||||||| |||||||| || | | |||||||| || | || ||| | || || Sbjct 3375206 AAGAAACGGGGACTCATGCCCGGCCTCACCTTTTCCAATGAACTCATCAGCAGAGATGA 3375148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356220006459793