Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cavia_20aperea_20[genbank_20GCA_5F000688575.1_202014-01-21] 3,131 sequences; 2,716,396,567 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq29 89.7 8e-13 >seq29 Length=3441549 Score = 89.7 bits (98), Expect = 8e-13 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 125428 TGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTT 125487 |||| || || || ||||| || |||||||| ||||| ||| ||||||| | ||||| | Sbjct 3375271 TGGTAGCCTTTGCTGCCGTGGAAGGCATCTTTTTTTCTGGTTCTTTTGCGTCGATCTTCT 3375212 Query 125488 GGCTCAAGAAGCGCGGACTCATGCCCGGACTGAC 125521 |||| ||||| || |||||||||||||| || || Sbjct 3375211 GGCTGAAGAAACGGGGACTCATGCCCGGCCTCAC 3375178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741030196795560