Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cavia_20aperea_20[genbank_20GCA_5F000688575.1_202014-01-21]
3,131 sequences; 2,716,396,567 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq56 105 5e-18
>seq56
Length=43217229
Score = 105 bits (116), Expect = 5e-18
Identities = 123/165 (75%), Gaps = 1/165 (1%)
Strand=Plus/Minus
Query 25491 AGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGT 25550
|| || || |||| || |||||||| ||||| || ||||||||||||||| |||||
Sbjct 41711005 AGGCCCGTGACGTGCGCAATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 41710946
Query 25551 ACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCT 25610
|| || | ||||||| |||| || | |||||| |||||||| || | || |||
Sbjct 41710945 ACGCCCAGGCCCATGT-CCCCAGAGCGCTGGTACAGCTGACAGGACAATTCCCCGTTCAC 41710887
Query 25611 CACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAG 25655
|||||| ||||| || | ||||| ||| ||||| || || || ||
Sbjct 41710886 CACGTAGAACTGGCAGAGGGTGTGGCAGGGAGGCAGCGCCATCAG 41710842
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340124620668063
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |