Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cavia_20aperea_20[genbank_20GCA_5F000688575.1_202014-01-21] 3,131 sequences; 2,716,396,567 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq29 86.0 8e-12 >seq29 Length=3441549 Score = 86.0 bits (94), Expect = 8e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 102546 AATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTCTTCGAAAAG 102605 ||||||||||||||||||||||| ||| || || ||||||||||||||||| || ||| Sbjct 3374298 AATCCATTTGACTTCATGGAGAATATTTCTCTGGAAGGGAAGACAAACTTCTTTGAGAAG 3374239 Query 102606 AGGGTTGGGGACTAT 102620 ||||| || || ||| Sbjct 3374238 AGGGTAGGCGAGTAT 3374224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620718105694320