Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cavia_20aperea_20[genbank_20GCA_5F000688575.1_202014-01-21] 3,131 sequences; 2,716,396,567 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq789 149 1e-30 seq87 136 9e-27 seq52 132 1e-25 seq160 105 2e-17 seq2878 104 6e-17 seq2352 104 6e-17 seq2260 104 6e-17 seq1739 104 6e-17 seq1487 104 6e-17 seq1261 104 6e-17 seq948 104 6e-17 seq669 104 6e-17 seq1557 100 7e-16 seq100 100 7e-16 seq844 98.7 2e-15 seq600 96.9 8e-15 seq56 93.3 1e-13 seq45 93.3 1e-13 seq778 89.7 1e-12 seq278 87.8 4e-12 seq2917 84.2 5e-11 >seq789 Length=7921018 Score = 149 bits (164), Expect = 1e-30 Identities = 168/225 (75%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| ||||||| ||||| ||||||||||| || |||| | |||||||| | |||||| Sbjct 5847185 ACGGAGTCTCAACACAAGATGGAGAGTGGACTCCCTTTGAATGTTGTAATCAGACAAAGT 5847126 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || ||||| ||| | ||||| || | ||| || || || ||||| || Sbjct 5847125 GCGTCCATCTTCCAGTTGCTTACCAACAAAGATCAGCCTTTGCTGATCAGGAGGAATTCC 5847066 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| ||||||||||| ||| ||| ||| || ||||| |||| || || | | Sbjct 5847065 TTCCTTATCTTGGATCTTGGCCTTTACATTTTCTATAGTGTCGGAGGGCTCAACCTGGAG 5847006 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||| | ||||| | ||||||| ||| | ||||| || Sbjct 5847005 GGTGATGGTCCTCCCCGTAAGGGTTTTTACGAAAATCTGCATCTT 5846961 >seq87 Length=1495935 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| ||||| || ||||| || || |||| ||||| |||| | || | |||||| Sbjct 1203157 CAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGCCCATC 1203098 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| |||||||| ||||||||||| || | || ||||| || || || || |||||||| Sbjct 1203097 TTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 1203038 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||||||| ||| ||| || |||||||| || ||||| || | ||||| || Sbjct 1203037 TTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGT 1202978 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| || | || || | ||| | ||||| Sbjct 1202977 CTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 1202945 Score = 129 bits (142), Expect = 1e-24 Identities = 157/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||| || ||||| || ||||| || || |||| ||||| || | | || | |||||| Sbjct 1202929 CAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGCCCATC 1202870 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| |||||||| ||||||||||| || | || ||||| || || || || |||||||| Sbjct 1202869 TTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 1202810 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||||||| ||| ||| || |||||||| || ||||| || | ||||| || Sbjct 1202809 TTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGT 1202750 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 |||||| || | || || | ||| | |||||| Sbjct 1202749 CTTGCCAGTGAGGGTCTTCACGAAGATCTGCATT 1202716 >seq52 Length=2480672 Score = 132 bits (146), Expect = 1e-25 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTC-T 225554 ||||||| ||||| || |||||| | || ||||| | |||||| | | |||||| | | Sbjct 411654 AGTCTCAACACAAGATGAAGAGTGAACTCCTTTTGAATGTTGTAACCAGACAAAGTACAT 411595 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 || |||||| || ||||| ||||| ||||| || | ||| || || || ||||| ||||| Sbjct 411594 CCAATCTTCCAGTTGCTTACCAGCAAAGATCAGCCCTTGCTGATCAGGAGGAATTCCTTC 411535 Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 ||| || |||||||| ||| ||| ||| | ||||| |||| ||| || || | || Sbjct 411534 CTTATCCTGGATCTTGGCCTTTACATTTTCTACAGTGTCCGAGGGTTCAACCTCGAG-GT 411476 Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 | | ||||| ||| | | ||||||||||| Sbjct 411475 GGTGGTCTTCCCCATAACGGTTTTTATGAA 411446 >seq160 Length=686523 Score = 105 bits (116), Expect = 2e-17 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610 |||| |||| ||| | || | ||||| ||||| || || || |||||||| | ||||| Sbjct 651551 CCAAATTTATAACATAATCGTCACGGCCCATGCTTTCGTAATAATTTTCTTCATAGTTAT 651492 Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGA 7670 || |||| || || ||||||||||| || || || ||||| || ||||||||||| || Sbjct 651491 ACCAATTATAATTGGGGGTTTCGGAAACTGGTTAGTGCCTTTGATAATTGGTGCTCCAGA 651432 Query 7671 TATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCT 7730 || || || || | | || || ||||| || || | || || ||||| || || || Sbjct 651431 CATAGCATTCCCGCGTATAAATAACATAAGCTTCTGGCTTCTTCCTCCTTCATTTTTACT 651372 Query 7731 A 7731 | Sbjct 651371 A 651371 Score = 84.2 bits (92), Expect = 5e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 |||||| ||||||||||||||||| || || || || || ||||| || || || || | Sbjct 650978 TTCAGGGTGACCAAAAAATCAGAACAAGTGCTGGTACAGAATAGGGTCCCCCCCTCCAGC 651037 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGT 370767 |||||||||||| | || || ||||||| ||| || Sbjct 651038 AGGATCAAAAAAGGTTGTGTTCAAATTTCGATCTGT 651073 >seq2878 Length=5066 Score = 104 bits (114), Expect = 6e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| | |||||||| || | ||||| ||||| || || || |||||||| | ||||| Sbjct 1003 CAAATCTACAACGTAATCGTCACGGCCCATGCTTTCGTAATAATTTTCTTCATAGTTATA 944 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || |||| || || || |||||||| || || || ||||| || ||||||||||| || Sbjct 943 CCAATTATAATTGGAGGCTTCGGAAACTGGTTAGTGCCTTTGATAATTGGTGCTCCAGAC 884 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 || || || || | | || || ||||| || || | || || ||||| || || ||| Sbjct 883 ATAGCATTCCCGCGTATAAATAACATAAGCTTCTGGCTTCTTCCTCCTTCATTTTTACTA 824 Score = 87.8 bits (96), Expect = 4e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 |||||| ||||||||||||||||| || || || || || ||||| || || || || | Sbjct 431 TTCAGGGTGACCAAAAAATCAGAACAAGTGCTGGTACAGAATAGGGTCCCCCCCTCCAGC 490 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTA 370769 |||||||||||| | || || ||||||| ||| |||| Sbjct 491 AGGATCAAAAAAGGTTGTGTTCAAATTTCGATCTGTTA 528 >seq2352 Length=7166 Score = 104 bits (114), Expect = 6e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| | |||||||| || | ||||| ||||| || || || |||||||| | ||||| Sbjct 4095 CAAATCTACAACGTAATCGTCACGGCCCATGCTTTCGTAATAATTTTCTTCATAGTTATA 4154 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || |||| || || || |||||||| || || || ||||| || ||||||||||| || Sbjct 4155 CCAATTATAATTGGAGGCTTCGGAAACTGGTTAGTGCCTTTGATAATTGGTGCTCCAGAC 4214 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 || || || || | | || || ||||| || || | || || ||||| || || ||| Sbjct 4215 ATAGCATTCCCGCGTATAAATAACATAAGCTTCTGGCTTCTTCCTCCTTCATTTTTACTA 4274 >seq2260 Length=7359 Score = 104 bits (114), Expect = 6e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| | |||||||| || | ||||| ||||| || || || |||||||| | ||||| Sbjct 1687 CAAATCTACAACGTAATCGTCACGGCCCATGCTTTCGTAATAATTTTCTTCATAGTTATA 1628 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || |||| || || || |||||||| || || || ||||| || ||||||||||| || Sbjct 1627 CCAATTATAATTGGAGGCTTCGGAAACTGGTTAGTGCCTTTGATAATTGGTGCTCCAGAC 1568 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 || || || || | | || || ||||| || || | || || ||||| || || ||| Sbjct 1567 ATAGCATTCCCGCGTATAAATAACATAAGCTTCTGGCTTCTTCCTCCTTCATTTTTACTA 1508 >seq1739 Length=10467 Score = 104 bits (114), Expect = 6e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| | |||||||| || | ||||| ||||| || || || |||||||| | ||||| Sbjct 321 CAAATCTACAACGTAATCGTCACGGCCCATGCTTTCGTAATAATTTTCTTCATAGTTATA 262 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || |||| || || || |||||||| || || || ||||| || ||||||||||| || Sbjct 261 CCAATTATAATTGGAGGCTTCGGAAACTGGTTAGTGCCTTTGATAATTGGTGCTCCAGAC 202 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 || || || || | | || || ||||| || || | || || ||||| || || ||| Sbjct 201 ATAGCATTCCCGCGTATAAATAACATAAGCTTCTGGCTTCTTCCTCCTTCATTTTTACTA 142 >seq1487 Length=13511 Score = 104 bits (114), Expect = 6e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| | |||||||| || | ||||| ||||| || || || |||||||| | ||||| Sbjct 2673 CAAATCTACAACGTAATCGTCACGGCCCATGCTTTCGTAATAATTTTCTTCATAGTTATA 2614 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || |||| || || || |||||||| || || || ||||| || ||||||||||| || Sbjct 2613 CCAATTATAATTGGAGGCTTCGGAAACTGGTTAGTGCCTTTGATAATTGGTGCTCCAGAC 2554 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 || || || || | | || || ||||| || || | || || ||||| || || ||| Sbjct 2553 ATAGCATTCCCGCGTATAAATAACATAAGCTTCTGGCTTCTTCCTCCTTCATTTTTACTA 2494 >seq1261 Length=18486 Score = 104 bits (114), Expect = 6e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| | |||||||| || | ||||| ||||| || || || |||||||| | ||||| Sbjct 733 CAAATCTACAACGTAATCGTCACGGCCCATGCTTTCGTAATAATTTTCTTCATAGTTATA 792 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || |||| || || || |||||||| || || || ||||| || ||||||||||| || Sbjct 793 CCAATTATAATTGGAGGCTTCGGAAACTGGTTAGTGCCTTTGATAATTGGTGCTCCAGAC 852 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 || || || || | | || || ||||| || || | || || ||||| || || ||| Sbjct 853 ATAGCATTCCCGCGTATAAATAACATAAGCTTCTGGCTTCTTCCTCCTTCATTTTTACTA 912 Score = 104 bits (114), Expect = 6e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| | |||||||| || | ||||| ||||| || || || |||||||| | ||||| Sbjct 17472 CAAATCTACAACGTAATCGTCACGGCCCATGCTTTCGTAATAATTTTCTTCATAGTTATA 17531 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || |||| || || || |||||||| || || || ||||| || ||||||||||| || Sbjct 17532 CCAATTATAATTGGAGGCTTCGGAAACTGGTTAGTGCCTTTGATAATTGGTGCTCCAGAC 17591 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 || || || || | | || || ||||| || || | || || ||||| || || ||| Sbjct 17592 ATAGCATTCCCGCGTATAAATAACATAAGCTTCTGGCTTCTTCCTCCTTCATTTTTACTA 17651 >seq948 Length=32193 Score = 104 bits (114), Expect = 6e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| | |||||||| || | ||||| ||||| || || || |||||||| | ||||| Sbjct 1901 CAAATCTACAACGTAATCGTCACGGCCCATGCTTTCGTAATAATTTTCTTCATAGTTATA 1842 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || |||| || || || |||||||| || || || ||||| || ||||||||||| || Sbjct 1841 CCAATTATAATTGGAGGCTTCGGAAACTGGTTAGTGCCTTTGATAATTGGTGCTCCAGAC 1782 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 || || || || | | || || ||||| || || | || || ||||| || || ||| Sbjct 1781 ATAGCATTCCCGCGTATAAATAACATAAGCTTCTGGCTTCTTCCTCCTTCATTTTTACTA 1722 Score = 104 bits (114), Expect = 6e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| | |||||||| || | ||||| ||||| || || || |||||||| | ||||| Sbjct 18587 CAAATCTACAACGTAATCGTCACGGCCCATGCTTTCGTAATAATTTTCTTCATAGTTATA 18528 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || |||| || || || |||||||| || || || ||||| || ||||||||||| || Sbjct 18527 CCAATTATAATTGGAGGCTTCGGAAACTGGTTAGTGCCTTTGATAATTGGTGCTCCAGAC 18468 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 || || || || | | || || ||||| || || | || || ||||| || || ||| Sbjct 18467 ATAGCATTCCCGCGTATAAATAACATAAGCTTCTGGCTTCTTCCTCCTTCATTTTTACTA 18408 Score = 84.2 bits (92), Expect = 5e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 |||||| ||||||||||||||||| || || || || || ||||| || || || || | Sbjct 1329 TTCAGGGTGACCAAAAAATCAGAACAAGTGCTGGTACAGAATAGGGTCCCCCCCTCCAGC 1388 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGT 370767 |||||||||||| | || || ||||||| ||| || Sbjct 1389 AGGATCAAAAAAGGTTGTGTTCAAATTTCGATCTGT 1424 Score = 84.2 bits (92), Expect = 5e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 |||||| ||||||||||||||||| || || || || || ||||| || || || || | Sbjct 18017 TTCAGGGTGACCAAAAAATCAGAACAAGTGCTGGTACAGAATAGGGTCCCCCCCTCCAGC 18076 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGT 370767 |||||||||||| | || || ||||||| ||| || Sbjct 18077 AGGATCAAAAAAGGTTGTGTTCAAATTTCGATCTGT 18112 >seq669 Length=63098 Score = 104 bits (114), Expect = 6e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| | |||||||| || | ||||| ||||| || || || |||||||| | ||||| Sbjct 32321 CAAATCTACAACGTAATCGTCACGGCCCATGCTTTCGTAATAATTTTCTTCATAGTTATA 32262 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || |||| || || || |||||||| || || || ||||| || ||||||||||| || Sbjct 32261 CCAATTATAATTGGAGGCTTCGGAAACTGGTTAGTGCCTTTGATAATTGGTGCTCCAGAC 32202 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 || || || || | | || || ||||| || || | || || ||||| || || ||| Sbjct 32201 ATAGCATTCCCGCGTATAAATAACATAAGCTTCTGGCTTCTTCCTCCTTCATTTTTACTA 32142 >seq1557 Length=13327 Score = 100 bits (110), Expect = 7e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| | |||||||| || | ||||| ||||| || || || |||||||| | ||||| Sbjct 586 CAAATCTACAACGTAATCGTCACGGCCCATGCTTTCGTAATAATTTTCTTCATAGTTATA 645 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || |||| || || || |||||||| || || || ||||| || ||||||||||| || Sbjct 646 CCAATTATAATTGGAGGCTTCGGAAACTGGTTAGTGCCTTTGATAATTGGTGCTCCAGAC 705 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTT 7724 || || || || | | || || ||||| || || | || || ||||| || Sbjct 706 ATAGCATTCCCGCGTATAAATAACATAAGCTTCTGGCTTCTTCCTCCTTCATT 758 >seq100 Length=39968729 Score = 100 bits (110), Expect = 7e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 7558 TACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTT 7617 || || || || || || || || || || || | ||||||||| | |||| || || Sbjct 79488 TATAATGTAATCATCACCGCCCACGCTTTCGTAGTAATTTTCTTTATGGTTACACCAATT 79429 Query 7618 ATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCT 7677 || || | || |||||||| ||||| ||||| ||||| |||||||| ||||| || || Sbjct 79428 ATAATCAGAGGCTTCGGAAACTGATTAGTTCCCTTAATAATTGGTGCCCCTGACATAGCC 79369 Query 7678 TTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCT 7730 || || | | ||||||||||| |||||| | || || || || || || || Sbjct 79368 TTCCCTCGAATAAACAATATAAGCTTTTGACTTCTTCCTCCATCATTTTTACT 79316 >seq844 Length=7119069 Score = 98.7 bits (108), Expect = 2e-15 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 7547 ATAGCCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTG 7606 ||| |||| | |||||||| ||| |||| || ||||||||||| || || |||||| | Sbjct 811797 ATAACCAAATCTACAACGTAATTGTTACTGCCCATGCCTTTGTAATAATCTTCTTTATAA 811738 Query 7607 TTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTC 7666 |||| || |||| || || || || | ||| ||| | | || ||||| |||||||| | Sbjct 811737 TTATACCCATTATAATTGGAGGATTTGCAAACTGACTAGCACCATTAATAATTGGTGCCC 811678 Query 7667 CTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACC 7715 || || ||||| || | | ||||| ||||||| ||| | || || Sbjct 811677 TGGACATAGCTTTCCCTCGAATAAACAACGTAAGTTTCTGACTTCTCCC 811629 >seq600 Length=10546185 Score = 96.9 bits (106), Expect = 8e-15 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| ||||| || ||||| || ||||| || || ||||| | |||||||| | |||| | Sbjct 4929165 ACGGAGTCTTAGCACAAGATGAAGAGTCGACTCCTTTTGAATGTTGTAATCAGACAAAAT 4929224 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 ||||||||||| ||||| || | ||||| || ||| || || || |||| | Sbjct 4929225 ATGTCCATCTTCTAGTTGCTTACCTGTAAAGATCAGCTTTTGCTGATCAGGAAGAATTGC 4929284 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGT 225659 |||||| || |||||||| ||| ||| ||| |||| ||| |||| Sbjct 4929285 TTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATGGCGTCCAAGGT 4929332 >seq56 Length=43217229 Score = 93.3 bits (102), Expect = 1e-13 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 5017 CACTTCAATACCTTGCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATG 5076 ||||||| ||||| || || || | || ||| ||| ||||| |||||||||||||||| Sbjct 19058510 CACTTCAGTACCTGGCTCCTTATTCTGGCTGTTCTATGGGAGAGTATTTTAGAGATAATG 19058569 Query 5077 GTAAACATGCTTTAATCATCTACGATGATTTAAGTAAACAATTCAA 5122 | ||||||||||| |||||||| || || ||| ||||| |||| Sbjct 19058570 GAAAACATGCTTTGATCATCTATGACGACTTATCCAAACAGGTCAA 19058615 Score = 86.0 bits (94), Expect = 1e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 4477 TGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCTGCTTGT 4536 || || |||||||| || || |||||||| || || |||||||| |||||||| || ||| Sbjct 19058937 TGTCCGTCAGTAATGGAAATGACATTTGTTGGAATGTAAGCAGACACATCACCAGCCTGT 19058878 Query 4537 GTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578 || || | || ||||| || || | || |||||||||||| Sbjct 19058877 GTCTCTATGACTGGTAAAGCAGTCAAGGAGCCACCACCAAAA 19058836 >seq45 Length=48336697 Score = 93.3 bits (102), Expect = 1e-13 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||| || |||||||||||||||| ||| ||||| || ||||||||||| ||| || | Sbjct 22568278 TTCTGGGTGACCAAAAAATCAGAGTAATTGTTGGTACAGGATAGGATCCCCTTTTCCAGC 22568219 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 |||||||||||||| ||||| |||||| || ||||| Sbjct 22568218 AGGATCAAAAAAGCTTGTATTTAAATTTTGGTCTGTTAA 22568180 Score = 84.2 bits (92), Expect = 5e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 7585 TTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATTC 7644 || || || ||||||||| | || || || |||| || || |||| ||||| ||||| Sbjct 25393802 TTCGTAATAATTTTCTTTATAGTCATACCAATTATAATTGGGAGTTTTGGAAACTGATTA 25393743 Query 7645 GTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTTT 7704 ||||||||||| |||||||| || |||| || || | | | || |||||||| ||| Sbjct 25393742 GTTCCTTTAATAATTGGTGCCCCCAATATAGCCTTCACCTGAATAAATAATATAAGCTTT 25393683 Query 7705 TGATTACTACCGCCTTCCTTATTT 7728 || | || || || || || ||| Sbjct 25393682 TGGCTCCTTCCTCCATCATTCTTT 25393659 >seq778 Length=60969063 Score = 89.7 bits (98), Expect = 1e-12 Identities = 110/148 (74%), Gaps = 3/148 (2%) Strand=Plus/Minus Query 7585 TTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATTC 7644 || ||| | |||||||| || || || || |||| || || || || | ||| ||||| Sbjct 40368428 TTCGTTCTAATTTTCTTCTTAGTCATACCAATTATAATTGGAGGATTTG-AAACTGATTA 40368370 Query 7645 GTTCCTTTAATGATTGGTGCTCCTG--ATATGGCTTTTCCAAGGCTTAACAATATAAGTT 7702 ||||| |||||||||||||| |||| |||| || || || | | ||||||||||| | Sbjct 40368369 GTTCCCTTAATGATTGGTGCCCCTGATATATAGCCTTCCCCCGAATAAACAATATAAGCT 40368310 Query 7703 TTTGATTACTACCGCCTTCCTTATTTCT 7730 ||||| | || || || || || || || Sbjct 40368309 TTTGACTTCTTCCTCCATCATTCTTACT 40368282 Score = 84.2 bits (92), Expect = 5e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 |||||| |||||||||||||||||||| |||||||| ||||| || || ||||| | | Sbjct 40367889 TTCAGGGTGACCAAAAAATCAGAATAAGTGTTGATATAGGATGGGGTCTCCTCCTCTGGC 40367948 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGT 370767 | | || ||||| | || || ||||||| ||| || Sbjct 40367949 TAGGTCGAAAAAAGTTGTGTTTAAATTTCGATCTGT 40367984 >seq278 Length=24422027 Score = 87.8 bits (96), Expect = 4e-12 Identities = 152/219 (69%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| ||||| |||||| | |||| ||| ||||| || | | ||| | ||||| Sbjct 19078086 CAGGACTAGGTGCAGAGTGTACCCTTTCAGGATGTTGTAGTCAGAAAGAGTGCAACCATC 19078027 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| | |||||| || || ||| || | ||||| | | ||||||||||| || | Sbjct 19078026 TTCCAACTGCTTGCCCACGTGGATGAGCCTCTGTTGCCCTGCAGGAATACCTTCGTTAGC 19077967 Query 225621 TTGGATCTTTTGCTTCACAGCTTCG--ATGGTGTCTGAGGTTTCCACGTCTAACGTGATC 225678 || || || ||||||| |||| |||||| ||| ||||| || | ||| | Sbjct 19077966 CTGAATGTTGGCCTTCACA--TTCGCAGTGGTGTTGCAGGGCTCCACCTCCAGGGTGGTG 19077909 Query 225679 GTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTA 225717 |||||||| || | |||| ||||| |||||||||| Sbjct 19077908 GTCTTGCCTGTAAGCGTTTCCATGAAGCTTTGCATTTTA 19077870 >seq2917 Length=4521 Score = 84.2 bits (92), Expect = 5e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 |||||| ||||||||||||||||| || || || || || ||||| || || || || | Sbjct 4108 TTCAGGGTGACCAAAAAATCAGAACAAGTGCTGGTACAGAATAGGGTCCCCCCCTCCAGC 4167 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGT 370767 |||||||||||| | || || ||||||| ||| || Sbjct 4168 AGGATCAAAAAAGGTTGTGTTCAAATTTCGATCTGT 4203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192483360492914