Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cavia_20porcellus_20[refseq_20GCF_5F000151735.1_202008-03-03]
3,144 sequences; 2,723,219,641 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
seq3129 111 1e-19
>seq3129
Length=43247874
Score = 111 bits (122), Expect = 1e-19
Identities = 121/161 (75%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031
|||| || ||||| |||||||| | || ||||| ||||| | ||||| ||||| |||
Sbjct 41738105 ATGGCGCTGCCTCCCTGTCACACCCTCTGCCAGTTCTACGTGGTGAACGGGGAATTGTCC 41738164
Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091
|| || | |||||| | || ||||| |||||||| || || || ||||||||||| |
Sbjct 41738165 TGTCAGCTGTACCAGCGCTCTGGGGACATGGGCCTGGGCGTGCCCTTCAACATTGCCAGC 41738224
Query 19092 TATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACT 19132
|| || || || |||||||| | ||||| || || || ||
Sbjct 41738225 TACGCCCTGCTCACCTACATGATTGCGCACGTCACGGGCCT 41738265
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399488692005480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |