Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cavia_20porcellus_20[refseq_20GCF_5F000151735.1_202008-03-03]
3,144 sequences; 2,723,219,641 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq3129 132 4e-26
>seq3129
Length=43247874
Score = 132 bits (146), Expect = 4e-26
Identities = 127/163 (78%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 20990 CAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGG 21049
||||||||||||||| || |||| || || || |||||||||||||| ||||| || ||
Sbjct 41738266 CAGGCCCGTGACGTGCGCAATCATGTAGGTGAGCAGGGCGTAGCTGGCAATGTTGAAGGG 41738207
Query 21050 GACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGC 21109
|| || ||||||||||| | || | |||||||||||| ||||||| ||||| |
Sbjct 41738206 CACGCCCAGGCCCATGTCCCCAGAGCGCTGGTACAGCTGACAGGACAATTCCCCGTTCAC 41738147
Query 21110 CACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATC 21152
|||||| ||||| || | |||||| ||||| || ||||||
Sbjct 41738146 CACGTAGAACTGGCAGAGGGTGTGACAGGGAGGCAGCGCCATC 41738104
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427759608693120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |