Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cavia_20porcellus_20[refseq_20GCF_5F000151735.1_202008-03-03] 3,144 sequences; 2,723,219,641 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq3106 199 9e-46 seq3082 172 1e-37 seq3105 145 2e-29 seq3063 145 2e-29 seq3061 145 2e-29 seq2997 131 4e-25 seq3135 116 9e-21 seq3141 111 4e-19 seq3080 98.7 2e-15 seq3109 96.9 8e-15 seq3143 95.1 3e-14 seq3126 91.5 3e-13 seq3000 91.5 3e-13 seq3018 87.8 4e-12 >seq3106 Length=22756556 Score = 199 bits (220), Expect = 9e-46 Identities = 570/870 (66%), Gaps = 15/870 (2%) Strand=Plus/Plus Query 268729 TGATATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGA 268788 ||| || ||| |||||| || | |||| || || |||||||| | ||| || || || Sbjct 216712 TGACATTTGGCAGATGTATAAGAAAGCCGAGGCCTCCTTTTGGACGGCAGAGGAGGTGGA 216771 Query 268789 TCTGTCTTATGACTTAATAGATTGGAAAAATTTAAAACCAGAAGAAAGAAGATTTATATC 268848 ||| || | ||| | | ||| || | || || || || ||| |||||||| Sbjct 216772 TCTTTCCAAAGACATTCAGCACTGGGAAGCCCTGAAGCCCGAGGAGAGATACTTTATATC 216831 Query 268849 TTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAA 268908 | |||| || || ||||| | || ||||| || || || || ||| | || ||| Sbjct 216832 ACACGTTCTGGCTTTCTTTGCCGCCAGCGATGGCATAGTCAATGAGAATTTGGTGGAGCG 216891 Query 268909 GTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTAT 268968 |||| | ||||| || || || | || || | ||||| ||||| |||||||| || || Sbjct 216892 GTTCAGCCAAGAAGTTCAAATCACAGAGGCTCGCTGTTTCTACGGCTTCCAGATCGCCAT 216951 Query 268969 AGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAA 269028 ||||| |||||||| || ||||||||||| | || ||||||||||| | ||| || Sbjct 216952 GGAAAACATTCATTCTGAAATGTACAGTCTCCTCATCGATACTTATATCAAAGATTCCAG 217011 Query 269029 CGAAAAGAAAAGACTATTTTCTTCTAT-GAGAACTATGGACTGTGTGAGaaaaaaaTCTG 269087 |||| | | || || | | || ||| || ||| ||||||| || || || | Sbjct 217012 AGAAAGGGAGTTCCTCTTCAATGCCATCGAG-ACCATGCCCTGTGTG---AAGAAGTCGG 217067 Query 269088 AATGGGCTCTGAAATGGAT---AAACGATAGCGCGCCTTACGGAGAAAGGTTAGTTGCTT 269144 | ||||| || ||||| || | || |||| || ||| | | || || | Sbjct 217068 ACTGGGCCTTGCGCTGGATTGGGGACAAAGAGGCCACTTATGGGGAACGCGTGGTAGCCT 217127 Query 269145 TTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGA 269204 |||| || || ||||| || || ||||| || |||||||| | ||||| ||| |||||| Sbjct 217128 TTGCTGCCGTGGAAGGCATCTTTTTTTCTGGTTCTTTTGCGTCGATCTTCTGGCTGAAGA 217187 Query 269205 AAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTT 269264 || | || || ||||| || | || || || || ||| | || ||||| || || || Sbjct 217188 AACGGGGACTCATGCCCGGCCTCACCTTTTCCAATGAACTCATCAGCAGAGATGAGGGCC 217247 Query 269265 TACACTGCGACTTCGCTTGTTTATTATTTACTAATTATCTTTCACACAAACCTTCTCAAG 269324 | ||||| |||||||| || | | || || | || || | ||| || | Sbjct 217248 TGCACTGTGACTTCGCCTGCCTGATGTT---CAAGCACCTGATGCATAGACCCTCAGAGC 217304 Query 269325 ATAGAGTATACGAAATTATAGATTCA--GCTGTTTCTGTAGAAACAGAATTTCTAACGGA 269382 | || || | || ||||| | ||| || || | || || || || ||||| Sbjct 217305 AGAGGGTGAAGGAGATTATCG--TCAACGCCGTCAGAATCGAGCAGGAGTTCCTCACGGA 217362 Query 269383 AGCTCTATCTATCGATCTTATCGGTATGAATAGCAAATCGATGATAGAATATATTAAGTT 269442 || | | | | || || || ||||| || | |||| | || || |||| Sbjct 217363 GGCCTTGCCAGTGAAGCTGATTGGCATGAACTGCGAGCTCATGAAGCAGTACATCGAGTT 217422 Query 269443 CGTATCTGATAGATTGCTGGTGTCTTTAGGGTTTAGTAAAAAATATAACGTTGAAAATCC 269502 ||| |||| || | || | | || ||| | || | | | || |||||||| Sbjct 217423 CGTGGCTGACAGGCTCATGCTAGAGCTGGGCTTTGGCAAGGTTTTTCAAGTGGAAAATCC 217482 Query 269503 GTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAAGCGGGT 269562 ||| || ||||||||||| || ||||||| ||| | || ||||| |||||| |||| Sbjct 217483 ATTTGACTTCATGGAGAATATTTCTCTAGAAGGGAAGACAAACTTCTTTGAGAAGAGGGT 217542 Query 269563 AAGTAACTATCAGAAAATGGGTGTAATGTC 269592 | | | ||||||| ||||| || ||||| Sbjct 217543 AGGCGAGTATCAGAGGATGGGAGTTATGTC 217572 >seq3082 Length=10725151 Score = 172 bits (190), Expect = 1e-37 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | || || || || | || || |||||||| || || |||||| Sbjct 1251466 ATCCCACCTCTCAGGCGCAGCACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCA 1251407 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||| | ||| ||||| || || || || ||||| || |||||||| || |||||| Sbjct 1251406 GAAAGAGTGCGACCATCTTCCAGCTGCTTGCCTGCAAAGATAAGCCTCTGCTGGTCAGGA 1251347 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||||||||| ||||| || || ||||| || | ||| ||||| || || Sbjct 1251346 GGAATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCC 1251287 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||| ||||| || || || || || |||||||| Sbjct 1251286 ACCTCCAGAGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 1251237 Score = 167 bits (184), Expect = 5e-36 Identities = 155/197 (79%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| |||||||| || || |||||||| ||||| | ||| ||||| || || || || Sbjct 1251661 GTAGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCTTCCAGCTGCTTGCCT 1251602 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||||||| || |||||||| || |||||||||||||| ||||| || || Sbjct 1251601 GCAAAGATGAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTATCCTGGATCTTGGCCTTC 1251542 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| || || || || || || || || || ||||| ||||| ||||| Sbjct 1251541 ACATTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCAGTCAGTGTC 1251482 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 1251481 TTCACGAAGATCTGCAT 1251465 >seq3105 Length=21505965 Score = 145 bits (160), Expect = 2e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | || || || || ||||| || || ||||| | ||| | || ||||| Sbjct 7417354 ACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAATCAGACAAAGTACGTCCATCTTCC 7417413 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 |||||| | ||||||| || ||||| || ||||||||||| |||||||| |||||||| Sbjct 7417414 AGTTGTGTAGCAGCAAAGATCAGCCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 7417473 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| || ||||||||||||| || || ||||| ||| | | || ||||| Sbjct 7417474 ATCTTGGCCTTTACATTTTCTATAGTGTCCAGGGGTTCAGTCTCGTGGATGATGGTCTTC 7417533 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || |||| ||||||||||| ||| |||| ||| Sbjct 7417534 CCTGTAAAGGTTTTTACAAAAATCGGCATCTTG 7417566 Score = 109 bits (120), Expect = 1e-18 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 104405 TCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTA 104464 |||||| |||| || || ||||||| ||||| || || |||| ||| ||||| || ||| Sbjct 5645122 TCTTCTTGTTGATTACCCACAAAAATCAGCCTTTGCTGCTCAGAAGGAATTCCATCCTTA 5645063 Query 104465 TCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATA 104524 |||||||| ||||| |||||||| ||| || || | |||| | |||| | || ||| Sbjct 5645062 TCCTGAATTTTTGCCTTTACATTATCTGTAGTGTCTCAAGGTCCAACCTGGAATGCAATG 5645003 Query 104525 GTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 || || | |||| | ||||||||| ||||| || || Sbjct 5645002 GTATTCTCTATAAGGGATTTTACAAAAATCTGTATCTT 5644965 >seq3063 Length=7952490 Score = 145 bits (160), Expect = 2e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | || || || | ||||| || || ||||| | ||| | || ||||| Sbjct 5877711 ACAAGATGGAGAGTGGACTCCCTTTGAATGTTGTAATCAGACAAAGTGCATCCATCTTCC 5877652 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 ||||| || ||| |||| || ||||| || ||||||||||| |||||||| ||||| || Sbjct 5877651 AGTTGCTTACCAACAAAGATCAGCCTTTGCTGATCAGGAGGAATTCCTTCCTTATCTTGG 5877592 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| || ||||||||||||| || | | || || |||| || || || ||| | Sbjct 5877591 ATCTTGGCCTTTACATTTTCTATAGTGTTGGAGGGCTCAACCTGGAGGGTGATGGTCCTC 5877532 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || ||||| |||||||| || |||||||| ||| Sbjct 5877531 CCCGTAAGGGTTTTTACGAAAATCTGCATCTTG 5877499 >seq3061 Length=7642621 Score = 145 bits (160), Expect = 2e-29 Identities = 162/215 (75%), Gaps = 5/215 (2%) Strand=Plus/Minus Query 104345 CTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCG 104404 || || || ||||| | || | || || ||||| || || ||||| | ||| | || Sbjct 2174632 CTCAGCACAAGATGAAGAGTGGTCTCCTTTTGAATGTTGTAATCAGACAAAGTGCATCCA 2174573 Query 104405 TCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTA 104464 ||||| |||| |||||||| || ||||| |||||||||||||| |||||||| ||| Sbjct 2174572 TCTTCCAGTTA----CCAGCAAAGATCAGCCTTTGTTGATCAGGAGGAATTCCTTCCTTA 2174517 Query 104465 TCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATA 104524 ||||| ||||| || |||||||||||||| || || |||||| ||| || || || Sbjct 2174516 TCCTGGATCTTGGCCTTTACATTTTCTACAGTGTCTGAAGGTTCAGCCTTGAGGGTGATG 2174457 Query 104525 GTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || ||||| | ||||| || |||||||| Sbjct 2174456 GTCTTTCCTGTAAG-GGTTTTATGAAAATCTGCAT 2174423 >seq2997 Length=2481227 Score = 131 bits (144), Expect = 4e-25 Identities = 159/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCG-TCTTC 104409 || ||||| | || | || || ||||| || || |||| | ||| | || ||||| Sbjct 411694 ACAAGATGAAGAGTGAACTCCTTTTGAATGTTGTAACCAGACAAAGTACATCCAATCTTC 411635 Query 104410 TAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469 ||||| || |||||||| || |||| || ||||||||||| |||||||| |||||||| Sbjct 411634 CAGTTGCTTACCAGCAAAGATCAGCCCTTGCTGATCAGGAGGAATTCCTTCCTTATCCTG 411575 Query 104470 AATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529 ||||| || |||||||||||||| || || ||||| ||||| || || | ||||| Sbjct 411574 GATCTTGGCCTTTACATTTTCTACAGTGTCCGAGGGTTCAACCTCGAG-GTGGTGGTCTT 411516 Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || ||| ||||||| || ||||| || ||| Sbjct 411515 CCCCATAACGGTTTTTATGAAAATCTGTATCTTG 411482 >seq3135 Length=60673567 Score = 116 bits (128), Expect = 9e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 104366 GATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCA 104425 || ||||||||||| || ||||| || ||||| | |||||| || || ||||| || ||| Sbjct 60530416 GACTCTTTCTGAATGTTGTAGTCCGAGAGAGTCCGACCGTCCTCCAGCTGTTTGCCGGCA 60530357 Query 104426 AAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACA 104485 || | || | | || || || || || ||||| || || || || || ||||| ||| Sbjct 60530356 AATACCAGGAGCCGCTGGTCGGGTGGGATGCCTTCCTTGTCTTGGATTTTGGCTTTGACA 60530297 Query 104486 TTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTT 104545 || || ||| ||||| || || ||||| || || || ||||| || | || || || Sbjct 60530296 TTCTCACTGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGTCTTGCCCCTTAGGGTCTTC 60530237 Query 104546 ACAAATATCTGCAT 104559 || ||||||||||| Sbjct 60530236 ACGAATATCTGCAT 60530223 >seq3141 Length=78381119 Score = 111 bits (122), Expect = 4e-19 Identities = 163/227 (72%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 104345 CTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCG 104404 || || || ||||| | ||||| || || ||| | || | || ||| | || | || Sbjct 5667357 CTCAGCACAAGATGAAGAGTAGACTCCTTTTGAGTTTTGTTGT--GATCAATTTGT-CCA 5667413 Query 104405 TCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTA 104464 |||| |||||||| ||| |||| || ||||| || ||||||| | | ||||||| ||| Sbjct 5667414 TCTTTCAGTTGTTTACCACCAAAGATCAGCCTTTGCTGATCAGCAAGAATTCCTTTGTTA 5667473 Query 104465 TCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATA 104524 ||||| |||| || ||||||||||||| || || ||||| ||| ||||| || Sbjct 5667474 TCCTGGCTCTTGGCCTTTACATTTTCTATAGTGTCCAAGGGTTCAGTCTCAAGTGTGATG 5667533 Query 104525 GTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGTGTACAGT 104571 ||||| || | || ||||||| || ||||| || ||| ||||| Sbjct 5667534 GTCTTCCCCAT-AGGGTTTTTATGAAAATCTGTATCTTGGAGACAGT 5667579 Score = 102 bits (112), Expect = 2e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 104373 TCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTA 104432 |||| || || ||| ||| ||||| | || ||||| ||||| || ||| || || | Sbjct 34743515 TCTGGATGTTGCAGTTAGAAAGAGTGCCACAATCTTCCAGTTGCTTGCCAATGAAGATGA 34743574 Query 104433 GCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTA 104492 ||||||| | ||||| | || |||||||||||| ||||| || || | ||| | Sbjct 34743575 GCCTCTGCTACTCAGGGAGAATGACTTCTTTATCCTAGATCTTGGCCTTCATATTACCAG 34743634 Query 104493 CGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATA 104552 |||||| || | || ||||| || || || ||||| || | || |||||| |||| | Sbjct 34743635 TGGTATCACTGGTCTCCACCTCCAGGGTGATGGTCTTGCCCATTAGAGTTTTTGCAAAGA 34743694 Query 104553 TCTGCATTTTG 104563 | ||||||||| Sbjct 34743695 TATGCATTTTG 34743705 >seq3080 Length=10554711 Score = 98.7 bits (108), Expect = 2e-15 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || || || ||||| | || || || || ||||| || || ||||| | | | Sbjct 4932295 AGTCTTAGCACAAGATGAAGAGTCGACTCCTTTTGAATGTTGTAATCAGACAAAATATGT 4932354 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || ||||| ||||| || || | ||| || ||| | || ||||||||| | ||| |||| Sbjct 4932355 CCATCTTCCAGTTGCTTACCTGTAAAGATCAGCTTTTGCTGATCAGGAAGAATTGCTTCC 4932414 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGG 104495 |||||||| ||||| || ||||||||||||| || Sbjct 4932415 TTATCCTGGATCTTGGCCTTTACATTTTCTATGG 4932448 >seq3109 Length=24440124 Score = 96.9 bits (106), Expect = 8e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429 ||||| | || || |||||||| ||||| | ||| ||||| | || || || || | Sbjct 19092295 CTTTCAGGATGTTGTAGTCAGAAAGAGTGCAACCATCTTCCAACTGCTTGCCCACATGGA 19092236 Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489 | ||||||||||| | | ||| || ||||| ||| ||||||| || || || ||||| Sbjct 19092235 TGAGCCTCTGTTGCCCTGCAGGAATACCTTCGTTAGCCTGAATGTTGGCCTTCACATTCG 19092176 Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549 | ||| | || || || ||||| || || | ||||| || ||||| |||| || | Sbjct 19092175 CAGTGGTGTTGCAGGGCTCCACCTCCAGGGTGGTGGTCTTGCCTGTAAGCGTTTCTATGA 19092116 Query 104550 ATATCTGCATTTT 104562 | | |||||||| Sbjct 19092115 AGCTTTGCATTTT 19092103 >seq3143 Length=88675666 Score = 95.1 bits (104), Expect = 3e-14 Identities = 102/134 (76%), Gaps = 2/134 (1%) Strand=Plus/Plus Query 269126 GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCC 269185 ||||| || | || || || || || || || || | ||||| |||||||| ||||| Sbjct 4807015 GGAGAGAG--TGGTGGCCTTCGCGGCCGTGGAGGGCGTGTTCTTCTCGGGGTCCTTTGCG 4807072 Query 269186 GCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTG 269245 |||||||| ||| ||||||| |||||||| |||| || | || ||||| ||||| | Sbjct 4807073 GCTATCTTCTGGCTGAAGAAGAGAGGCCTCCTGCCCGGCCTCACCTTCTCCAACGAGCTC 4807132 Query 269246 ATAAGCAGGGACGA 269259 || ||||||||||| Sbjct 4807133 ATCAGCAGGGACGA 4807146 >seq3126 Length=40167016 Score = 91.5 bits (100), Expect = 3e-13 Identities = 129/178 (72%), Gaps = 5/178 (3%) Strand=Plus/Plus Query 104323 TTTATTTATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382 ||| || ||||| || | || || | | ||||| | || || || || ||||| | Sbjct 32913834 TTTCTTAATTCCACCACAAAGTCTCAACATAAGATGAAGGGTGGACTCATTTTGAATGTC 32913893 Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT-AGCCTCTGTT 104441 || ||| | ||| || | ||| ||| |||| |||||||||| | || || || Sbjct 32913894 GTA---AGACAAAGTGTGTCCATATTCCAGTGGTTTACCAGCAAAAAATCAGGCTTTGC- 32913949 Query 104442 GATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC 104499 |||||||||| |||||||| ||||||||| |||| || |||||||||||||| || || Sbjct 32913950 GATCAGGAGGAATTCCTTCCTTATCCTGATTCTTGGCCTTTACATTTTCTACAGTGTC 32914007 >seq3000 Length=2535745 Score = 91.5 bits (100), Expect = 3e-13 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 104381 TTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGT 104440 || || ||||| | ||| | || ||||| | ||| | ||||||| || ||||| || Sbjct 1110527 TTGTAATCAGACAAAGTACATCCATCTTCCACTTGCATAACAGCAAAGATCAGCCTTTGA 1110468 Query 104441 TGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTAT 104498 |||| |||||| |||||||| ||||||||||||| || |||| |||||||| |||| Sbjct 1110467 TGATTAGGAGGAATTCCTTCCTTATCCTGAATCTCAGCCTTTATATTTTCTATAGTAT 1110410 >seq3018 Length=3443724 Score = 87.8 bits (96), Expect = 4e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 268901 GTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAG 268960 || ||| |||| | ||||| || || || | || || | ||||| ||||| |||||| Sbjct 3378126 GTGGAGCGGTTCAGCCAAGAAGTTCAAATCACAGAGGCTCGCTGTTTCTACGGCTTCCAG 3378067 Query 268961 ATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATAT 269016 || || || ||||| |||||||| || ||||||||||| | || ||||||||||| Sbjct 3378066 ATCGCCATGGAAAACATTCATTCCGAAATGTACAGTCTCCTCATCGATACTTATAT 3378011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151352018793952