Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cavia_20porcellus_20[refseq_20GCF_5F000151735.1_202008-03-03]
3,144 sequences; 2,723,219,641 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq3106 199 9e-46
seq3082 172 1e-37
seq3105 145 2e-29
seq3063 145 2e-29
seq3061 145 2e-29
seq2997 131 4e-25
seq3135 116 9e-21
seq3141 111 4e-19
seq3080 98.7 2e-15
seq3109 96.9 8e-15
seq3143 95.1 3e-14
seq3126 91.5 3e-13
seq3000 91.5 3e-13
seq3018 87.8 4e-12
>seq3106
Length=22756556
Score = 199 bits (220), Expect = 9e-46
Identities = 570/870 (66%), Gaps = 15/870 (2%)
Strand=Plus/Plus
Query 268729 TGATATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGA 268788
||| || ||| |||||| || | |||| || || |||||||| | ||| || || ||
Sbjct 216712 TGACATTTGGCAGATGTATAAGAAAGCCGAGGCCTCCTTTTGGACGGCAGAGGAGGTGGA 216771
Query 268789 TCTGTCTTATGACTTAATAGATTGGAAAAATTTAAAACCAGAAGAAAGAAGATTTATATC 268848
||| || | ||| | | ||| || | || || || || ||| ||||||||
Sbjct 216772 TCTTTCCAAAGACATTCAGCACTGGGAAGCCCTGAAGCCCGAGGAGAGATACTTTATATC 216831
Query 268849 TTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAA 268908
| |||| || || ||||| | || ||||| || || || || ||| | || |||
Sbjct 216832 ACACGTTCTGGCTTTCTTTGCCGCCAGCGATGGCATAGTCAATGAGAATTTGGTGGAGCG 216891
Query 268909 GTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTAT 268968
|||| | ||||| || || || | || || | ||||| ||||| |||||||| || ||
Sbjct 216892 GTTCAGCCAAGAAGTTCAAATCACAGAGGCTCGCTGTTTCTACGGCTTCCAGATCGCCAT 216951
Query 268969 AGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAA 269028
||||| |||||||| || ||||||||||| | || ||||||||||| | ||| ||
Sbjct 216952 GGAAAACATTCATTCTGAAATGTACAGTCTCCTCATCGATACTTATATCAAAGATTCCAG 217011
Query 269029 CGAAAAGAAAAGACTATTTTCTTCTAT-GAGAACTATGGACTGTGTGAGaaaaaaaTCTG 269087
|||| | | || || | | || ||| || ||| ||||||| || || || |
Sbjct 217012 AGAAAGGGAGTTCCTCTTCAATGCCATCGAG-ACCATGCCCTGTGTG---AAGAAGTCGG 217067
Query 269088 AATGGGCTCTGAAATGGAT---AAACGATAGCGCGCCTTACGGAGAAAGGTTAGTTGCTT 269144
| ||||| || ||||| || | || |||| || ||| | | || || |
Sbjct 217068 ACTGGGCCTTGCGCTGGATTGGGGACAAAGAGGCCACTTATGGGGAACGCGTGGTAGCCT 217127
Query 269145 TTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGA 269204
|||| || || ||||| || || ||||| || |||||||| | ||||| ||| ||||||
Sbjct 217128 TTGCTGCCGTGGAAGGCATCTTTTTTTCTGGTTCTTTTGCGTCGATCTTCTGGCTGAAGA 217187
Query 269205 AAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTT 269264
|| | || || ||||| || | || || || || ||| | || ||||| || || ||
Sbjct 217188 AACGGGGACTCATGCCCGGCCTCACCTTTTCCAATGAACTCATCAGCAGAGATGAGGGCC 217247
Query 269265 TACACTGCGACTTCGCTTGTTTATTATTTACTAATTATCTTTCACACAAACCTTCTCAAG 269324
| ||||| |||||||| || | | || || | || || | ||| || |
Sbjct 217248 TGCACTGTGACTTCGCCTGCCTGATGTT---CAAGCACCTGATGCATAGACCCTCAGAGC 217304
Query 269325 ATAGAGTATACGAAATTATAGATTCA--GCTGTTTCTGTAGAAACAGAATTTCTAACGGA 269382
| || || | || ||||| | ||| || || | || || || || |||||
Sbjct 217305 AGAGGGTGAAGGAGATTATCG--TCAACGCCGTCAGAATCGAGCAGGAGTTCCTCACGGA 217362
Query 269383 AGCTCTATCTATCGATCTTATCGGTATGAATAGCAAATCGATGATAGAATATATTAAGTT 269442
|| | | | | || || || ||||| || | |||| | || || ||||
Sbjct 217363 GGCCTTGCCAGTGAAGCTGATTGGCATGAACTGCGAGCTCATGAAGCAGTACATCGAGTT 217422
Query 269443 CGTATCTGATAGATTGCTGGTGTCTTTAGGGTTTAGTAAAAAATATAACGTTGAAAATCC 269502
||| |||| || | || | | || ||| | || | | | || ||||||||
Sbjct 217423 CGTGGCTGACAGGCTCATGCTAGAGCTGGGCTTTGGCAAGGTTTTTCAAGTGGAAAATCC 217482
Query 269503 GTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAAGCGGGT 269562
||| || ||||||||||| || ||||||| ||| | || ||||| |||||| ||||
Sbjct 217483 ATTTGACTTCATGGAGAATATTTCTCTAGAAGGGAAGACAAACTTCTTTGAGAAGAGGGT 217542
Query 269563 AAGTAACTATCAGAAAATGGGTGTAATGTC 269592
| | | ||||||| ||||| || |||||
Sbjct 217543 AGGCGAGTATCAGAGGATGGGAGTTATGTC 217572
>seq3082
Length=10725151
Score = 172 bits (190), Expect = 1e-37
Identities = 176/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| || | || || || || | || || |||||||| || || ||||||
Sbjct 1251466 ATCCCACCTCTCAGGCGCAGCACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCA 1251407
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| ||||| | ||| ||||| || || || || ||||| || |||||||| || ||||||
Sbjct 1251406 GAAAGAGTGCGACCATCTTCCAGCTGCTTGCCTGCAAAGATAAGCCTCTGCTGGTCAGGA 1251347
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||||||||| ||||| || || ||||| || | ||| ||||| || ||
Sbjct 1251346 GGAATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCC 1251287
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || || ||||| ||||| || || || || || ||||||||
Sbjct 1251286 ACCTCCAGAGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 1251237
Score = 167 bits (184), Expect = 5e-36
Identities = 155/197 (79%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||| |||||||| || || |||||||| ||||| | ||| ||||| || || || ||
Sbjct 1251661 GTAGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCTTCCAGCTGCTTGCCT 1251602
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || |||||||| || |||||||| || |||||||||||||| ||||| || ||
Sbjct 1251601 GCAAAGATGAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTATCCTGGATCTTGGCCTTC 1251542
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| || || || || || || || || || ||||| ||||| |||||
Sbjct 1251541 ACATTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCAGTCAGTGTC 1251482
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 1251481 TTCACGAAGATCTGCAT 1251465
>seq3105
Length=21505965
Score = 145 bits (160), Expect = 2e-29
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|| ||||| | || || || || ||||| || || ||||| | ||| | || |||||
Sbjct 7417354 ACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAATCAGACAAAGTACGTCCATCTTCC 7417413
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
|||||| | ||||||| || ||||| || ||||||||||| |||||||| ||||||||
Sbjct 7417414 AGTTGTGTAGCAGCAAAGATCAGCCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 7417473
Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530
||||| || ||||||||||||| || || ||||| ||| | | || |||||
Sbjct 7417474 ATCTTGGCCTTTACATTTTCTATAGTGTCCAGGGGTTCAGTCTCGTGGATGATGGTCTTC 7417533
Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
|| |||| ||||||||||| ||| |||| |||
Sbjct 7417534 CCTGTAAAGGTTTTTACAAAAATCGGCATCTTG 7417566
Score = 109 bits (120), Expect = 1e-18
Identities = 119/158 (75%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 104405 TCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTA 104464
|||||| |||| || || ||||||| ||||| || || |||| ||| ||||| || |||
Sbjct 5645122 TCTTCTTGTTGATTACCCACAAAAATCAGCCTTTGCTGCTCAGAAGGAATTCCATCCTTA 5645063
Query 104465 TCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATA 104524
|||||||| ||||| |||||||| ||| || || | |||| | |||| | || |||
Sbjct 5645062 TCCTGAATTTTTGCCTTTACATTATCTGTAGTGTCTCAAGGTCCAACCTGGAATGCAATG 5645003
Query 104525 GTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562
|| || | |||| | ||||||||| ||||| || ||
Sbjct 5645002 GTATTCTCTATAAGGGATTTTACAAAAATCTGTATCTT 5644965
>seq3063
Length=7952490
Score = 145 bits (160), Expect = 2e-29
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|| ||||| | || || || | ||||| || || ||||| | ||| | || |||||
Sbjct 5877711 ACAAGATGGAGAGTGGACTCCCTTTGAATGTTGTAATCAGACAAAGTGCATCCATCTTCC 5877652
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
||||| || ||| |||| || ||||| || ||||||||||| |||||||| ||||| ||
Sbjct 5877651 AGTTGCTTACCAACAAAGATCAGCCTTTGCTGATCAGGAGGAATTCCTTCCTTATCTTGG 5877592
Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530
||||| || ||||||||||||| || | | || || |||| || || || ||| |
Sbjct 5877591 ATCTTGGCCTTTACATTTTCTATAGTGTTGGAGGGCTCAACCTGGAGGGTGATGGTCCTC 5877532
Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
|| ||||| |||||||| || |||||||| |||
Sbjct 5877531 CCCGTAAGGGTTTTTACGAAAATCTGCATCTTG 5877499
>seq3061
Length=7642621
Score = 145 bits (160), Expect = 2e-29
Identities = 162/215 (75%), Gaps = 5/215 (2%)
Strand=Plus/Minus
Query 104345 CTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCG 104404
|| || || ||||| | || | || || ||||| || || ||||| | ||| | ||
Sbjct 2174632 CTCAGCACAAGATGAAGAGTGGTCTCCTTTTGAATGTTGTAATCAGACAAAGTGCATCCA 2174573
Query 104405 TCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTA 104464
||||| |||| |||||||| || ||||| |||||||||||||| |||||||| |||
Sbjct 2174572 TCTTCCAGTTA----CCAGCAAAGATCAGCCTTTGTTGATCAGGAGGAATTCCTTCCTTA 2174517
Query 104465 TCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATA 104524
||||| ||||| || |||||||||||||| || || |||||| ||| || || ||
Sbjct 2174516 TCCTGGATCTTGGCCTTTACATTTTCTACAGTGTCTGAAGGTTCAGCCTTGAGGGTGATG 2174457
Query 104525 GTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || ||||| | ||||| || ||||||||
Sbjct 2174456 GTCTTTCCTGTAAG-GGTTTTATGAAAATCTGCAT 2174423
>seq2997
Length=2481227
Score = 131 bits (144), Expect = 4e-25
Identities = 159/214 (74%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCG-TCTTC 104409
|| ||||| | || | || || ||||| || || |||| | ||| | || |||||
Sbjct 411694 ACAAGATGAAGAGTGAACTCCTTTTGAATGTTGTAACCAGACAAAGTACATCCAATCTTC 411635
Query 104410 TAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469
||||| || |||||||| || |||| || ||||||||||| |||||||| ||||||||
Sbjct 411634 CAGTTGCTTACCAGCAAAGATCAGCCCTTGCTGATCAGGAGGAATTCCTTCCTTATCCTG 411575
Query 104470 AATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529
||||| || |||||||||||||| || || ||||| ||||| || || | |||||
Sbjct 411574 GATCTTGGCCTTTACATTTTCTACAGTGTCCGAGGGTTCAACCTCGAG-GTGGTGGTCTT 411516
Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
|| ||| ||||||| || ||||| || |||
Sbjct 411515 CCCCATAACGGTTTTTATGAAAATCTGTATCTTG 411482
>seq3135
Length=60673567
Score = 116 bits (128), Expect = 9e-21
Identities = 142/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 104366 GATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCA 104425
|| ||||||||||| || ||||| || ||||| | |||||| || || ||||| || |||
Sbjct 60530416 GACTCTTTCTGAATGTTGTAGTCCGAGAGAGTCCGACCGTCCTCCAGCTGTTTGCCGGCA 60530357
Query 104426 AAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACA 104485
|| | || | | || || || || || ||||| || || || || || ||||| |||
Sbjct 60530356 AATACCAGGAGCCGCTGGTCGGGTGGGATGCCTTCCTTGTCTTGGATTTTGGCTTTGACA 60530297
Query 104486 TTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTT 104545
|| || ||| ||||| || || ||||| || || || ||||| || | || || ||
Sbjct 60530296 TTCTCACTGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGTCTTGCCCCTTAGGGTCTTC 60530237
Query 104546 ACAAATATCTGCAT 104559
|| |||||||||||
Sbjct 60530236 ACGAATATCTGCAT 60530223
>seq3141
Length=78381119
Score = 111 bits (122), Expect = 4e-19
Identities = 163/227 (72%), Gaps = 4/227 (2%)
Strand=Plus/Plus
Query 104345 CTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCG 104404
|| || || ||||| | ||||| || || ||| | || | || ||| | || | ||
Sbjct 5667357 CTCAGCACAAGATGAAGAGTAGACTCCTTTTGAGTTTTGTTGT--GATCAATTTGT-CCA 5667413
Query 104405 TCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTA 104464
|||| |||||||| ||| |||| || ||||| || ||||||| | | ||||||| |||
Sbjct 5667414 TCTTTCAGTTGTTTACCACCAAAGATCAGCCTTTGCTGATCAGCAAGAATTCCTTTGTTA 5667473
Query 104465 TCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATA 104524
||||| |||| || ||||||||||||| || || ||||| ||| ||||| ||
Sbjct 5667474 TCCTGGCTCTTGGCCTTTACATTTTCTATAGTGTCCAAGGGTTCAGTCTCAAGTGTGATG 5667533
Query 104525 GTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGTGTACAGT 104571
||||| || | || ||||||| || ||||| || ||| |||||
Sbjct 5667534 GTCTTCCCCAT-AGGGTTTTTATGAAAATCTGTATCTTGGAGACAGT 5667579
Score = 102 bits (112), Expect = 2e-16
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 104373 TCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTA 104432
|||| || || ||| ||| ||||| | || ||||| ||||| || ||| || || |
Sbjct 34743515 TCTGGATGTTGCAGTTAGAAAGAGTGCCACAATCTTCCAGTTGCTTGCCAATGAAGATGA 34743574
Query 104433 GCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTA 104492
||||||| | ||||| | || |||||||||||| ||||| || || | ||| |
Sbjct 34743575 GCCTCTGCTACTCAGGGAGAATGACTTCTTTATCCTAGATCTTGGCCTTCATATTACCAG 34743634
Query 104493 CGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATA 104552
|||||| || | || ||||| || || || ||||| || | || |||||| |||| |
Sbjct 34743635 TGGTATCACTGGTCTCCACCTCCAGGGTGATGGTCTTGCCCATTAGAGTTTTTGCAAAGA 34743694
Query 104553 TCTGCATTTTG 104563
| |||||||||
Sbjct 34743695 TATGCATTTTG 34743705
>seq3080
Length=10554711
Score = 98.7 bits (108), Expect = 2e-15
Identities = 114/154 (74%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
|| || || || ||||| | || || || || ||||| || || ||||| | | |
Sbjct 4932295 AGTCTTAGCACAAGATGAAGAGTCGACTCCTTTTGAATGTTGTAATCAGACAAAATATGT 4932354
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
|| ||||| ||||| || || | ||| || ||| | || ||||||||| | ||| ||||
Sbjct 4932355 CCATCTTCCAGTTGCTTACCTGTAAAGATCAGCTTTTGCTGATCAGGAAGAATTGCTTCC 4932414
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGG 104495
|||||||| ||||| || ||||||||||||| ||
Sbjct 4932415 TTATCCTGGATCTTGGCCTTTACATTTTCTATGG 4932448
>seq3109
Length=24440124
Score = 96.9 bits (106), Expect = 8e-15
Identities = 137/193 (71%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429
||||| | || || |||||||| ||||| | ||| ||||| | || || || || |
Sbjct 19092295 CTTTCAGGATGTTGTAGTCAGAAAGAGTGCAACCATCTTCCAACTGCTTGCCCACATGGA 19092236
Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489
| ||||||||||| | | ||| || ||||| ||| ||||||| || || || |||||
Sbjct 19092235 TGAGCCTCTGTTGCCCTGCAGGAATACCTTCGTTAGCCTGAATGTTGGCCTTCACATTCG 19092176
Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549
| ||| | || || || ||||| || || | ||||| || ||||| |||| || |
Sbjct 19092175 CAGTGGTGTTGCAGGGCTCCACCTCCAGGGTGGTGGTCTTGCCTGTAAGCGTTTCTATGA 19092116
Query 104550 ATATCTGCATTTT 104562
| | ||||||||
Sbjct 19092115 AGCTTTGCATTTT 19092103
>seq3143
Length=88675666
Score = 95.1 bits (104), Expect = 3e-14
Identities = 102/134 (76%), Gaps = 2/134 (1%)
Strand=Plus/Plus
Query 269126 GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCC 269185
||||| || | || || || || || || || || | ||||| |||||||| |||||
Sbjct 4807015 GGAGAGAG--TGGTGGCCTTCGCGGCCGTGGAGGGCGTGTTCTTCTCGGGGTCCTTTGCG 4807072
Query 269186 GCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTG 269245
|||||||| ||| ||||||| |||||||| |||| || | || ||||| ||||| |
Sbjct 4807073 GCTATCTTCTGGCTGAAGAAGAGAGGCCTCCTGCCCGGCCTCACCTTCTCCAACGAGCTC 4807132
Query 269246 ATAAGCAGGGACGA 269259
|| |||||||||||
Sbjct 4807133 ATCAGCAGGGACGA 4807146
>seq3126
Length=40167016
Score = 91.5 bits (100), Expect = 3e-13
Identities = 129/178 (72%), Gaps = 5/178 (3%)
Strand=Plus/Plus
Query 104323 TTTATTTATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382
||| || ||||| || | || || | | ||||| | || || || || ||||| |
Sbjct 32913834 TTTCTTAATTCCACCACAAAGTCTCAACATAAGATGAAGGGTGGACTCATTTTGAATGTC 32913893
Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT-AGCCTCTGTT 104441
|| ||| | ||| || | ||| ||| |||| |||||||||| | || || ||
Sbjct 32913894 GTA---AGACAAAGTGTGTCCATATTCCAGTGGTTTACCAGCAAAAAATCAGGCTTTGC- 32913949
Query 104442 GATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC 104499
|||||||||| |||||||| ||||||||| |||| || |||||||||||||| || ||
Sbjct 32913950 GATCAGGAGGAATTCCTTCCTTATCCTGATTCTTGGCCTTTACATTTTCTACAGTGTC 32914007
>seq3000
Length=2535745
Score = 91.5 bits (100), Expect = 3e-13
Identities = 91/118 (77%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 104381 TTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGT 104440
|| || ||||| | ||| | || ||||| | ||| | ||||||| || ||||| ||
Sbjct 1110527 TTGTAATCAGACAAAGTACATCCATCTTCCACTTGCATAACAGCAAAGATCAGCCTTTGA 1110468
Query 104441 TGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTAT 104498
|||| |||||| |||||||| ||||||||||||| || |||| |||||||| ||||
Sbjct 1110467 TGATTAGGAGGAATTCCTTCCTTATCCTGAATCTCAGCCTTTATATTTTCTATAGTAT 1110410
>seq3018
Length=3443724
Score = 87.8 bits (96), Expect = 4e-12
Identities = 89/116 (77%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 268901 GTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAG 268960
|| ||| |||| | ||||| || || || | || || | ||||| ||||| ||||||
Sbjct 3378126 GTGGAGCGGTTCAGCCAAGAAGTTCAAATCACAGAGGCTCGCTGTTTCTACGGCTTCCAG 3378067
Query 268961 ATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATAT 269016
|| || || ||||| |||||||| || ||||||||||| | || |||||||||||
Sbjct 3378066 ATCGCCATGGAAAACATTCATTCCGAAATGTACAGTCTCCTCATCGATACTTATAT 3378011
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151352018793952
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