Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cavia_20porcellus_20[refseq_20GCF_5F000151735.1_202008-03-03]
3,144 sequences; 2,723,219,641 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq3129 96.9 2e-15
>seq3129
Length=43247874
Score = 96.9 bits (106), Expect = 2e-15
Identities = 121/165 (73%), Gaps = 1/165 (1%)
Strand=Plus/Minus
Query 25491 AGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGT 25550
|| || || |||| || |||||||| ||||| || ||||||||| ||||| |||||
Sbjct 41738265 AGGCCCGTGACGTGCGCAATCATGTAGGTGAGCAGGGCGTAGCTGGCAATGTTGAAGGGC 41738206
Query 25551 ACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCT 25610
|| || | ||||||| |||| || | |||||| |||||||| || | || |||
Sbjct 41738205 ACGCCCAGGCCCATGT-CCCCAGAGCGCTGGTACAGCTGACAGGACAATTCCCCGTTCAC 41738147
Query 25611 CACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAG 25655
|||||| ||||| || | ||||| || ||||| || || || ||
Sbjct 41738146 CACGTAGAACTGGCAGAGGGTGTGACAGGGAGGCAGCGCCATCAG 41738102
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340124566777512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |