Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cavia_20porcellus_20[refseq_20GCF_5F000151735.1_202008-03-03]
3,144 sequences; 2,723,219,641 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq3129 100 3e-16
>seq3129
Length=43247874
Score = 100 bits (110), Expect = 3e-16
Identities = 120/163 (74%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296
|| || || || || |||| ||| || || | |||| |||||||||||||| || ||
Sbjct 41738265 AGGCCCGTGACGTGCGCAATCATGTAGGTGAGCAGGGCGTAGCTGGCAATGTTGAAGGGC 41738206
Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356
|| |||| |||||||| || || | ||| |||||||||||||| | || |||| |
Sbjct 41738205 ACGCCCAGGCCCATGTCCCCAGAGCGCTGGTACAGCTGACAGGACAATTCCCCGTTCACC 41738146
Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCA 20399
|| || || || || | ||||||||| || ||||||||||
Sbjct 41738145 ACGTAGAACTGGCAGAGGGTGTGACAGGGAGGCAGCGCCATCA 41738103
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441355454048960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |