Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cavia_20porcellus_20[refseq_20GCF_5F000151735.1_202008-03-03] 3,144 sequences; 2,723,219,641 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq3108 152 4e-31 seq3124 147 2e-29 seq3129 120 2e-21 seq3134 113 3e-19 seq3099 111 1e-18 seq3114 105 5e-17 seq3143 93.3 3e-13 seq3127 86.0 5e-11 >seq3108 Length=23989115 Score = 152 bits (168), Expect = 4e-31 Identities = 461/706 (65%), Gaps = 11/706 (2%) Strand=Plus/Plus Query 518024 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 518083 || |||||||||||| || | | || | ||| | ||| | | |||| || | | Sbjct 13304429 TTGTCAAAATCTTCATCTACG---TGGGTGTCTCCAGCTTTAGATTTCACTTCAAAGATT 13304485 Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143 |||||||||| || | | | |||||| | ||||| | | ||||||| | || Sbjct 13304486 CCATCTTCAATAGTGAGGATTGACACATCAAAAATGCCACCTACTAAATCAAAAGTCAGC 13304545 Query 518144 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 518203 ||||| |||| | ||||| || || ||||| |||| ||||||||| ||||| Sbjct 13304546 ACATTTCTTTCAGCTCCAACCTTTTTGTCTAGGCCATAGGCAACAGCAGCAGCTGTTGGC 13304605 Query 518204 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 518263 ||||| |||||||| || ||||||||||||||||| |||| ||| |||| || || || Sbjct 13304606 TCATTGATAATTCTAAATACATTAAGACCAGCAATGTTTCCAGCAACTTTGGTTGCCTGA 13304665 Query 518264 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCA 518323 | || || || ||||| || || || |||| | || |||| || || || ||| Sbjct 13304666 CACTGAGAGTCATTAAAGTAAGCTGGCTCAGTGACCACAGCATTGGTAACAGTCTTCCCA 13304725 Query 518324 ATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGG 518383 | |||||| ||| ||| ||||| || | | | ||| ||||| | || | ||| Sbjct 13304726 AGATAAGCTTCTGCAATTTCCTTCATCTTTGTCAGCACCATAGATGATACTTTCTTTGGA 13304785 Query 518384 GAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTA 518443 | | ||| | || || ||| |||| || | || | | |||| Sbjct 13304786 CAGAAGCTCTTTGTCTCTCCTTTGTATTCTACTGGAACTTTGGGCCT----GCCTCATTC 13304841 Query 518444 ATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT-CT 518502 | || | || ||||| | |||||||| || || ||| | ||| | |||||| | Sbjct 13304842 ACCACCATGAAGGGCCAATGCTTCATATCAGACTGGACAATAGCATCA-TGAAATCTACA 13304900 Query 518503 ACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTT 518562 ||| | | | || |||| |||| || |||| ||| || ||||| |||||| ||| Sbjct 13304901 TCCAGTCAGATGCTTGGCATTGAAAACTGTGTTGGCTGGTTTTATTGCCACTTGATTTTT 13304960 Query 518563 GGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCG 518622 || |||||| |||||| ||| || | | | || || || |||||| | | Sbjct 13304961 TGCAGCATCTTGAATCAGTCCTTCGGTGTTAATTACAGAGACGTAACTTGGAGTGATTTG 13305020 Query 518623 ATTACCTTGATCATTCGCAATAATTTCAACTTTACC-ATTTTGCCATACACCTACACAAC 518681 ||| | |||||||| ||||| || || ||||| || || | | ||| | ||||| Sbjct 13305021 ATTTTCCTGATCATT-GCAATGATCTCCACTTTTCCAATGCTAGAAGACATCCACACAGG 13305079 Query 518682 TAAAAGTTGTTCCTAAATCAATACCAATAGCAATTTTATCTGACAT 518727 || || || || | |||| |||||| |||| || | |||||| Sbjct 13305080 AGAAGGTGGTGCCAAGATCAGTACCAACAGCAGTTCCCTTTGACAT 13305125 >seq3124 Length=37078832 Score = 147 bits (162), Expect = 2e-29 Identities = 368/552 (67%), Gaps = 14/552 (3%) Strand=Plus/Minus Query 517610 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 517669 |||||||| |||||||| || ||||| || | | | | ||| | || ||| |||||||| Sbjct 25402231 GCACCATAAGCAACAGCCTCGTCAGGGTTGATACTCTTATTCAATTCTTTTCCATTGAAG 25402172 Query 517670 AAATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 517728 |||| | ||||||| ||| | ||| |||||||||| || || || || || ||||| Sbjct 25402171 AAATCTTGTAGAAGTT-TCTGGATCTTGGGAATACGAGTAGAACCACCCACCAAGACAAT 25402113 Query 517729 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 517788 ||||| | |||||| || || || || | ||| | | | || || || || || || Sbjct 25402112 GTCATGGATCTGTGACTTGTCAAGCTTAGCATCTCGCAGAGCCTTCTCCACAGGGTCTAG 25402053 Query 517789 ACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATT 517848 | | | ||||| ||| | | || ||||| ||| ||| | ||||| | | || Sbjct 25402052 AGTGCCACGAAACAGGTCAGCATTCAGCTCTTCAAATCGAGCACGAGTAATGGAGGTATA 25401993 Query 517849 ATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG 517908 | || || ||||| | | ||||||| ||||| | | ||| || ||||| || Sbjct 25401992 GAAGTCGATCCCTTCATAGAGGGAATCAATCTCAATACTGGCTTGGGTGCTGGAAGAGAG 25401933 Query 517909 TGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA-AG---GCTTTTGCTGATT 517964 | | ||||| ||||||||||| || | || | || | || ||| | || | | Sbjct 25401932 GGTTCTCTTAGCTCGTTCACATGCAGTGCGAAGACGGCGGACAGCTCTCTTGTTCTCACT 25401873 Query 517965 GATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACG 518022 ||| || | |||| || | |||||| || ||| | | ||| | || | || Sbjct 25401872 GAT----GTCCTTCTTATGCTTGCGCTTGAACTCAGCAATAAA--ATGGTTGACCATCCG 25401819 Query 518023 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 518082 || ||||||||||| || || || | || | ||| | |||| | |||||| |||| Sbjct 25401818 GTTGTCAAAATCTTCTCCACCTAAGTGGGTGTCTCCAGCTGTAGATTTTACTTCAAAAAT 25401759 Query 518083 TCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAG 518142 ||||||||||| || | | | |||||| || ||||| || | ||||||||| || Sbjct 25401758 TCCATCTTCAATAGTGAGGATTGACACATCAAAAGTGCCACCTCCTAAATCAAAAATCAG 25401699 Query 518143 TACATTCATTTC 518154 || || |||| Sbjct 25401698 CACGTTTCTTTC 25401687 Score = 116 bits (128), Expect = 3e-20 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 ||||| || | ||||| |||| ||||||||| ||||| ||||| |||||||| | ||| Sbjct 25401594 TTTTTGTCTAAGCCATAGGCAATAGCAGCAGCTGTTGGCTCATTGATAATTCTAAGTACA 25401535 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 |||||||||||||| | || |||||||| || || || | || || || |||||||| Sbjct 25401534 TTAAGACCAGCAATGGTCCCAGCATCTTTGGTAGCCTGGCGCTGAGAGTCATTAAAATAA 25401475 Query 518285 GCAGGAACAGTAATAACGGCAT 518306 || || ||||||| || |||| Sbjct 25401474 GCTGGCACAGTAACCACAGCAT 25401453 >seq3129 Length=43247874 Score = 120 bits (132), Expect = 2e-21 Identities = 436/679 (64%), Gaps = 44/679 (6%) Strand=Plus/Minus Query 518024 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 518083 || |||||||| || || || || || | |||| |||| | | |||| ||| | | Sbjct 28183376 TTGTCAAAATCATCTCCACCTAAGGGGGTGTCACCTGCTGTAGATTTCACTTTGAAGATT 28183317 Query 518084 CCATCTTCAAGAGACAAAAGAGTT---ACATCATGGGTTCCACCACCCATATCAAAAATA 518140 ||| ||||| | || || || |||||| || | ||| || | ||||||||| Sbjct 28183316 CCACCTTCA---GTCATGAGGATTGACACATCAAAAGTGCTACCTCCTAAATCAAAAATC 28183260 Query 518141 AGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTT 518200 |||||||| |||| | ||||| || | ||||| |||| |||||| Sbjct 28183259 AGTACATTTCTTTCAACTCCAACCTTTTTGTCTAAGCCATAAGCAATAGCAGC------- 28183207 Query 518201 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 518260 ||||| ||||||| | ||||||||||||||||| |||| |||||||| || | Sbjct 28183206 ---TCATTGATAATTCCAAGTACATTAAGACCAGCAATGGTTCCAGCATCTTTGGT-TCC 28183151 Query 518261 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTA 518320 || | || || || ||||| || || || |||||| || |||| || || || Sbjct 28183150 TGACGCTGAGAGTCATTAAAGTAAGCTGGCCCAGTAACCACAGCATTGGTAACAGTCTTC 28183091 Query 518321 CCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCT 518380 |||| ||| ||| ||| |||| |||| || | | | | || || | | ||| Sbjct 28183090 CCAAGATACGCGTCTGCAGTTTCCTTCACCTTTGTCAGCACTGTAGAAGACACCTTCTCT 28183031 Query 518381 GGGGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACA 518440 || || | || ||| | || ||| ||||| || | || | || || Sbjct 28183030 GGACAAACT--CT----TTCTCTCTG-TATTCTACTTGAACCTTGGGCCTGCCTGCATCA 28182978 Query 518441 TTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT 518500 || | || |||| ||||| | |||| | | || || ||| | |||| | || | Sbjct 28182977 TTCACCACCATAAAGGGCCAATGCTTCACACCAGACTGGACAATAGCATCATCATCATAT 28182918 Query 518501 CTA---CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGA 518557 ||| ||||| | |||| ||||||||| || ||||| || || | ||| ||||| Sbjct 28182917 CTACGTCCAATCAGATGTTTGGCATCAAAAGCTGTGTTGGTGGGGTTCACTGCCACTTGA 28182858 Query 518558 TATTTGGCTGCATCTCCAATCAGATGTTCTG-----TCTCTG--------TAAATGAA-- 518602 | ||| || ||||||| || || |||| || |||||| | | |||| Sbjct 28182857 TTTTTTGCAGCATCTCTGATGAGTTGTTTTGCAGTATCTCTGATCAATCTTTAGTGAAAG 28182798 Query 518603 --ACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCAT 518660 ||||| |||||| || |||| || |||||||| ||||| || || ||||| |||| Sbjct 28182797 CGACATAACTTGGAGTGGTTTGATTTCCCTGATCATTGGCAATTATCTCCACTTTTCCAT 28182738 Query 518661 TTTGCCATACACCTACACA 518679 || | ||||| | ||| Sbjct 28182737 GCTGGGAGACACCCATACA 28182719 >seq3134 Length=59225736 Score = 113 bits (124), Expect = 3e-19 Identities = 769/1227 (63%), Gaps = 45/1227 (4%) Strand=Plus/Minus Query 517496 GTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 517555 ||||| | |||| | ||||| |||||||||||||||||||||||| | || | Sbjct 50880721 GTCATGACTCCACTAGGAGTTTCAGTACCAAGAGAAAGAGGAGTGACATCCAAAAGCAGC 50880662 Query 517556 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 517615 | || ||||| |||||| | | ||| ||||| || || |||| ||| | |||| Sbjct 50880661 AAATCTTGAACATTTTCAGACTTATCTCCAGATAGAATGGCAGCCTGAACAGCTGAACCA 50880602 Query 517616 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-T 517674 || | |||||| || ||||| || | | | ||| |||| ||| ||||||||||| | | Sbjct 50880601 TAAGTAACAGCCTCCTCAGGGTTGATGCTCTTATTCAGTTCTTTTCCATTGAAAAAGTCT 50880542 Query 517675 TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATG 517734 || | || |||| | ||| || ||| || || || || ||| ||| | ||||| Sbjct 50880541 TGTAGGAGCTTGT-GGATCTTGGGGATATGAATAGAGCCACCCACTTGGACATTGTCATG 50880483 Query 517735 CACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGC 517794 | |||| | || || ||||| | ||| | | | || || | || || ||| | Sbjct 50880482 GATCTGTCACTTGTCAAGTTTGGCATCTTGAAGAGCCTTCTCCTCAGGGTCCAGAGTGCC 50880423 Query 517795 TCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATC 517854 | || | ||| | || ||||| || | ||| | ||||| | |||| || Sbjct 50880422 ACAGAATAGGTCCACATTCAGCTCTTCAAACTGAGCACAAGTAATGGAGACACAGATGTC 50880363 Query 517855 AATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACG 517914 ||||||||| | | ||||||| ||| || | | ||| | ||||| | | Sbjct 50880362 AATTCCTTCATAGAGGGAATCAATCTCAGTCCTGGCTTGGATGCTGGAAGAGAAGATTCT 50880303 Query 517915 TTTAGCACGTTCACATGCTGTCCTTAG-TCTTCGTAAGG---CTTTTGCTGATTGATTCA 517970 ||||| |||||||||| || || | | ||| ||| | || | |||| Sbjct 50880302 CTTAGCTTGTTCACATGCAGTATGAAGATGGCAGACAGGTCTCTTGTTCTCACTGAT--- 50880246 Query 517971 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAA 518030 || | | |||| || ||||| || || | | | | | | || |||| Sbjct 50880245 -ATTTTTCTTATGCTTGTGATTGAATTCAGTAATAAAACGATTGATCGTTTGGTTGTCAA 50880187 Query 518031 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 518090 |||||||| || | | |||| || | |||||| | | || || | || ||| | Sbjct 50880186 AATCTTCATCT---ACATGGGTATCTCTAGCTGTAGCTTTCAGTTCAAAGATTCTATCAT 50880130 Query 518091 CAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 518150 ||| || | | | |||||| || | || |||||| || | |||| Sbjct 50880129 CAATAGTGAGGAATGACACATCAAAAGT--------GCTGATAAAAAATCAGCATATTCC 50880078 Query 518151 TTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAA 518210 |||| | ||||| | | ||||| |||| ||||||||| |||| ||||| | Sbjct 50880077 TTTCAGCTCCAACCTTTTTGTTTAAGCCATAGGCAATAGCAGCAGCTGTTGACTCATTGA 50880018 Query 518211 TAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTG 518270 ||||||| | ||||||||||||||||| |||| | | || | || || || | Sbjct 50880017 TAATTCTAAGTACATTAAGACCAGCAATGGTTCCAGTACCT----TAGCCTGATGCTGAG 50879962 Query 518271 AATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAG 518330 | || ||||| | || ||||||| ||| ||| || || || |||| |||| Sbjct 50879961 AGTCATTAAA-----CTGGCACAGTAACAACAGCACTGGTAACAGTCTTCCCAAGATAAA 50879907 Query 518331 CGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATT 518390 || ||| ||| ||||| || ||| |||| || | | ||| | | Sbjct 50879906 CGTCTGCAATTTCCTTCATCTTTGTTAGCATCA-----GACACCTCCACTGTATAGAAGC 50879852 Query 518391 GCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATT-AATAACT 518449 ||| | || ||| ||| ||||| || | ||| | || |||| || | Sbjct 50879851 TCTTTGTCTCTCTTTTGTATTCTACTTGAACCT-TGG--GCCTTCCTGCATTGTATGCCA 50879795 Query 518450 T--TAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT-CTACCA 518506 | | || ||||| | |||||||| || |||||| ||| ||||| || | ||| Sbjct 50879794 TCATGAAGGGCCAATGCTTCATATCAGACTGAACAACAGCATCA-TAAAAGCTACATCCA 50879736 Query 518507 ATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCT 518566 || | | || |||| |||| || |||||||| || ||| |||||| ||| || Sbjct 50879735 ATAAGATGCTTGGCATTGAAAACTGTGTTGGTTGGGTTCGTTGTCACTTGATTTTTTGCA 50879676 Query 518567 GCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTA 518626 |||||||||||||| |||| || | | || | | ||| |||| | || | ||| Sbjct 50879675 GCATCTCCAATCAGTTGTTTAGTGTTGGCGAAAGCAGTATAACTTGGAATAGTTCAATTT 50879616 Query 518627 CCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAA 518686 || |||||||| | || || || ||||| | | || | ||||| |||||| | Sbjct 50879615 CCCTGATCATTGG--ATTATCTCCACTTTTCAGTGCTGGAAGACACCCACACAAGAGTAG 50879558 Query 518687 GTTGTTCCTAAATCAATACCAATAGCA 518713 | || || | |||||| |||| |||| Sbjct 50879557 GCAGTGCCAAGATCAATGCCAACAGCA 50879531 >seq3099 Length=15920349 Score = 111 bits (122), Expect = 1e-18 Identities = 360/555 (65%), Gaps = 3/555 (1%) Strand=Plus/Minus Query 518024 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 518083 || ||||||||||| || || || | || | || | ||| | | |||| || | | Sbjct 2306941 TTGTCAAAATCTTCTCCACCTAAGTGGGTGTCACCAGCTATAGATTTCACTTCAAAGATT 2306882 Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143 |||||||||| || | | | |||||| || ||||| || | || |||||| || Sbjct 2306881 CCATCTTCAATAGTGAGGACTGACACATCAAAAGTGCCACCTCCTAAATAAAAAATCAGC 2306822 Query 518144 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 518203 ||||| |||| | ||||| || | ||||| |||| ||||||| | ||||| Sbjct 2306821 ACATTTCTTTCAGCTCCAATCTTTTTCTCTAAGCCATAGGCAATAGCAGCATCTGTTGGC 2306762 Query 518204 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 518263 ||||| |||||||| | ||||||||||||||||| | | |||| ||| || || || Sbjct 2306761 TCATTGATAATTCTAAGTACATTAAGACCAGCAATGGCTGCAGCATTTTTGGTTGCCTGA 2306702 Query 518264 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCA 518323 || || ||||| || || || ||||||| || ||| | || || ||| Sbjct 2306701 TGATGACGGTCATTAAAGTAAGCTGGCACAGTAACTACAGCAATGATAACAGTCTTCCCA 2306642 Query 518324 ATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGG 518383 | |||||| | | |||| ||||| || | | | ||| ||||| | | ||||| Sbjct 2306641 AGATAAGCTTCTTCAGTTTCCTTCATCTTTGTCAGCACCATAGATGATACGTCCTCTGGA 2306582 Query 518384 GA-ATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATT 518442 | | ||| ||| | || | || ||| ||||| | | | | || |||| Sbjct 2306581 AAGACATT-CTTTGTCTCTTCTTTGTATTCTACTT-GAGCCCTAGGCCAGCTGCATCATT 2306524 Query 518443 AATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCT 518502 | | || ||||||| |||||||| || || ||| ||| |||| | Sbjct 2306523 TGCCATCATGAAGGGCCAGTGCTTCATATCAGACTGGACAACAGCATCACTAAACCTACA 2306464 Query 518503 ACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTT 518562 ||||| | | || |||||||||| || ||||| || || ||||| |||||| ||| Sbjct 2306463 TCCAATAAGACACTTGGCATCAAAAACTGTGTTGGTGGGGTTCATTGCCACTTGATTTTT 2306404 Query 518563 GGCTGCATCTCCAAT 518577 | |||||||||| Sbjct 2306403 TGTAACATCTCCAAT 2306389 Score = 95.1 bits (104), Expect = 9e-14 Identities = 183/262 (70%), Gaps = 10/262 (4%) Strand=Plus/Minus Query 517505 CCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACAT-CAACTAGGACAATATTTTG 517563 ||||| || ||||| | || |||||||||||||||||||| |||| | ||| || ||| Sbjct 2307415 CCACCAGCAGTTTCAATACTAAGAGAAAGAGGAGTGACATCCAACAACAGCAA-ATCTTG 2307357 Query 517564 AA-GTTTTTCATCAGTTTGAC--CAACAAGAATAGCTGCTTGAATAGCAGCACCATATGC 517620 || |||||| | ||| | ||| || || || || || ||||| | |||||| | Sbjct 2307356 AACGTTTTTGGAC---TTGTCTTCAAATAGGATGGCAGCCTGGATAGCTGAACCATAAAC 2307300 Query 517621 AACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAG 517680 |||||| |||||||| || | | | || | || ||| |||||||| || | | | Sbjct 2307299 AACAGCCTCATCAGGGTTGATGCTCTTCTTCAATTATTTTCCATTGAAGAAGTCTTGTGG 2307240 Query 517681 AAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCT 517739 ||| | ||| | ||| || |||| || | || || || | ||||| ||||| | || Sbjct 2307239 AAGCT-TCTGGATCTTGGGGATACAAGTAAAACCACCCACCAGGACAATGTCATGAATCT 2307181 Query 517740 GTGATTTATCCAGTTTTGAATC 517761 |||| || || || || | ||| Sbjct 2307180 GTGACTTGTCAAGCTTAGCATC 2307159 >seq3114 Length=26790417 Score = 105 bits (116), Expect = 5e-17 Identities = 169/240 (70%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 517505 CCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGA 517564 ||||| || ||||| | |||||||||||||| || |||||| | || | | || ||| Sbjct 7927027 CCACCAGCCGTTTCAATACCAAGAGAAAGAGAAGAGACATCTAAAAGCAGCAAATCTTGG 7927086 Query 517565 AGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACA 517624 | |||| | | | ||| ||||| || || |||| ||| |||||||| ||||| Sbjct 7927087 ACATTTTTAGACTTGTCTCCAGATAGAATGGCAGCCTGAACAGCTGCACCATAAACAACA 7927146 Query 517625 GCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGT 517684 ||||||||||| || | | | | | | || ||| |||||||| || | | |||||| Sbjct 7927147 GCTTCATCAGGGTTGATGCTCTTACTCAATTCTTTTCCATTGAAGAAGTCTTGTAGAAGT 7927206 Query 517685 TGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGA 517743 | ||| | ||| |||||| ||| || | || || | ||||| ||||| | |||||| Sbjct 7927207 T-TCTGGATCTTGGGAATATGAGTAGAACTACCCACCAGGACAATGTCATGGATCTGTGA 7927265 Score = 100 bits (110), Expect = 2e-15 Identities = 122/165 (74%), Gaps = 1/165 (1%) Strand=Plus/Plus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 ||||| || | | ||| |||| ||||||||| |||| || ||| |||||||| | ||| Sbjct 7927638 TTTTTGTCTAAGCAATAGGCAATAGCAGCAGCTGTTGCTT-ATTGATAATTCTAAGTACA 7927696 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 |||||||||||||| |||| |||||| | || || || || ||||| ||||| || Sbjct 7927697 TTAAGACCAGCAATAGTTCCAGCATCTGTGGTTGCCTGATGCTGAGAATCATTAAAGTAA 7927756 Query 518285 GCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAA 518329 || || ||||||| || |||| || || || |||| |||| Sbjct 7927757 GCTGGCACAGTAACCACAGCATTGGTAACAGTGTTCCCAAGATAA 7927801 >seq3143 Length=88675666 Score = 93.3 bits (102), Expect = 3e-13 Identities = 182/263 (69%), Gaps = 7/263 (3%) Strand=Plus/Plus Query 517496 GTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 517555 ||||| | ||||| || |||| | ||||| |||||||||||||||||| | || | Sbjct 45737275 GTCATGACTCCACCAGCAATTTCAATACCAACAGAAAGAGGAGTGACATCCAAGAGCAGC 45737334 Query 517556 ATATTTTGA--AGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCAC 517613 | || |||| ||||| | ||||| || ||| | | ||| |||| ||| |||| Sbjct 45737335 AAATCTTGAATAGTTTCAGACTTGTTTG--CAGATAGATTGGTTGCCTGAACAGCTGCAC 45737392 Query 517614 CATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT 517673 |||| ||||||| |||||| | || | | | ||| | || ||| ||| ||||||| | Sbjct 45737393 CATAATCAACAGCCTCATCAAGGTTGATCCTCTTATTCAATTCTTTTCCA-TGAAAAAGT 45737451 Query 517674 TTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCA 517732 | | ||||| | ||| | ||| || |||| | || || || || | ||||| | Sbjct 45737452 CTTATAGAAGCT-TCTGGATCTTGGGGATACTGGTAGAACCACCCACCAGGACAATGCTA 45737510 Query 517733 TGCACCTGTGATTTATCCAGTTT 517755 || | |||||| || || ||||| Sbjct 45737511 TGGATCTGTGACTTGTCTAGTTT 45737533 Score = 93.3 bits (102), Expect = 3e-13 Identities = 137/191 (72%), Gaps = 5/191 (3%) Strand=Plus/Plus Query 518108 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTC---TTTGTCTTGG 518164 |||||| || ||| ||| | || |||||| || ||||| |||| | ||| Sbjct 45737803 ACATCAAAAGTAACACTACCTAAATAAAAAATCAGCACATTTCTTTCAGCTCCAACTTT- 45737861 Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 |||| ||| | | ||| |||| ||||||||| ||||||||||| |||||||| | ||| Sbjct 45737862 TTTTAATCTAAGCAATAAGCAATAGCAGCAGCTGTTGGTTCATTGATAATTCTGAGTACA 45737921 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 ||||||||||||| || | |||||||| || || || || | || || ||||| Sbjct 45737922 ATAAGACCAGCAATGGTTTCAGCATCTTTGGTTGCCTGATGCTGAAAGTCATT-AAATAA 45737980 Query 518285 GCAGGAACAGT 518295 || || ||||| Sbjct 45737981 GCTGGTACAGT 45737991 >seq3127 Length=41527808 Score = 86.0 bits (94), Expect = 5e-11 Identities = 181/266 (68%), Gaps = 7/266 (3%) Strand=Plus/Minus Query 517496 GTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 517555 ||||| | ||| | || || | | ||||||||||||||||| ||||| | || | | Sbjct 10662855 GTCATGACTCCAGCAGCAATTGCAATACCAAGAGAAAGAGGAGCAACATCCAAAAGCAGA 10662796 Query 517556 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 517615 | |||||||| |||| | | | ||| ||||| ||||| || | ||| |||||| Sbjct 10662795 A-ATTTTGAACATTTTTAGACTTGTTTCCAGATAGAATGGCTGCCTGTAAAGCTGCACCA 10662737 Query 517616 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT 517675 | ||| |||| |||| || ||| ||| | ||| || ||| ||| |||| || | | Sbjct 10662736 TGAGCAGCAGCCTCATTAGCATTGACA----CTCTTAATTATTTTCCACTGAAGAAGTCT 10662681 Query 517676 GAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 517735 | |||| | | | | ||| || ||| | | || || || |||| ||||| | || Sbjct 10662680 TACAGAAACT-TATGAACTT-GGGATATGGGTAGAACCACCCACTAGGACAATGTTATAG 10662623 Query 517736 ACCTGTGATTTATCCAGTTTTGAATC 517761 | |||||| || || ||||| | ||| Sbjct 10662622 ATCTGTGACTTGTCTAGTTTAGCATC 10662597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780666384363664