Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cavia_20porcellus_20[refseq_20GCF_5F000151735.1_202008-03-03] 3,144 sequences; 2,723,219,641 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq3123 304 2e-77 seq3087 271 1e-67 seq3128 224 1e-53 seq3099 129 7e-25 seq3108 113 6e-20 seq3114 102 1e-16 seq3133 93.3 5e-14 seq3134 84.2 3e-11 >seq3123 Length=34170112 Score = 304 bits (336), Expect = 2e-77 Identities = 830/1262 (66%), Gaps = 18/1262 (1%) Strand=Plus/Minus Query 6896 GGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCA 6955 || ||||| || || ||| || | ||||||||| | || ||| || |||| || Sbjct 9502409 GGGATCGTGGTGTTCCTCTTGATGAGCGGGGTCATGACGCCGCCCGCCGTCTCGATGCCC 9502350 Query 6956 AGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCC 7015 || ||||| || |||||||| | || | ||| || || || || | || || Sbjct 9502349 AGCGACAGGGGGGTCACGTCGAGCAGCAGCAGATCCTGCACGTTCTCAGACTTGTCGCCG 9502290 Query 7016 GTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTT 7075 | | |||||| || || |||| ||| ||||| || || ||||| |||||||| || | Sbjct 9502289 ATGAGGATGGCCGCCTGCACCGCCGCGCCGTAGGCCACTGCCTCGTCGGGGTTGATGCTC 9502230 Query 7076 TTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGT 7135 || ||||| || || ||||| || ||||| | || | || || || ||||| || Sbjct 9502229 TTGTTCAGCTCCTTGCCGTTGAAGAAATCCTGCAGCAGCTTCTGGATCTTGGGGATGCGA 9502170 Query 7136 GTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGA 7195 || || || || |||| ||||| || | | | || || | ||| | ||| || Sbjct 9502169 GTGGAGCCGCCCACCAGCACGATCTCCTGGATCTGGCCCTTGTCCAACTTGGCGTCGCGC 9502110 Query 7196 AGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAA 7255 || | || || || || |||| ||||| | ||| || |||||||| Sbjct 9502109 AGCGCCTTCTCCACCGGCTCCAGGGTCCCGCGGAAGAGGTCGGCGTTGAGCTCCTCAAAG 9502050 Query 7256 CGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATG 7315 || || ||||| ||||| || ||||| || ||||| ||||| | || || || |||||| Sbjct 9502049 CGGGCGCGGGTGATGGACGTGTAGAAGTCCACGCCCTCGTACAGAGAGTCGATCTCAATG 9501990 Query 7316 GTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGA 7375 | | || | | ||| | || ||||| |||||||| || ||||| || | || Sbjct 9501989 CTGGCCTGGGTGGACGAGCTCAGGGTGCGCTTGGCGCGCTCGCAGGCCGTGCGAAGTCGC 9501930 Query 7376 CGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAG 7435 || | || || ||| ||| || |||||||| || || || ||||| |||| Sbjct 9501929 CGCACCGCGCGTTTGTTGGGCACAATGTCCTTCTTATGCTTGCGCTTGAACTCCTCAGCC 9501870 Query 7436 AAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTC 7495 | ||| | || | | ||||| || || || |||| ||| || || || || || Sbjct 9501869 AGGTGGCTAACCATGCGGTTGTCGAAGTCCTCGCCGCCCAGGTGGGTGTCGCCGGCTGTG 9501810 Query 7496 GCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCA 7555 | || || || ||||| || | || ||| | | | || || || || ||||| || Sbjct 9501809 GACTTCACCTCGAAGATGCCGTCCTCGATGGTCAGGATGGACACGTCGAAGGTACCGCCG 9501750 Query 7556 CCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG------TTCTTATCGAGACCG 7609 ||||||||||| ||||| || ||| | ||| || || | ||||| || || ||| Sbjct 9501749 CCCAGGTCAAAGATGAGCACATTCTTCTCGCCGCCTGCGCAGCCCTTCTTGTCCAGGCCG 9501690 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAAT 7668 || || || || ||||| || || ||||| ||||| || || ||| || ||||| | || Sbjct 9501689 TAGGCAATGGCGGCCGCAGTAGGCTCATTGATAATCCGCAGCACA-TTGAGGCCGGTGAT 9501631 Query 7669 AGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTAC 7728 ||| ||||||| || || || || || || || ||||| || |||||||||||||| | Sbjct 9501630 AGTGCCCGCATCCTTGGTGGCCTGGCGCTGGGAGTCGTTGAAATAGGCCGGGACCGTGAT 9501571 Query 7729 GACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAG 7788 ||| ||| | ||||| || || || | || ||||| || ||||| || || || Sbjct 9501570 GACAGCGCTCTGCACTTTGCCTCCCAGGTAGGCCTCGGCGATCTCCTTCATCTTTGTGAG 9501511 Query 7789 AACCATCGATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCAACTT 7847 ||||| || || ||||| || | | | | || ||| | || || || | || || | Sbjct 9501510 CACCATGGAAGAGATCTCCTCCG-GGAAGAAGGTCTTCATCTCCCCCTTGTACTCCACCT 9501452 Query 7848 CAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGT 7907 | |||| || | | | || | ||| | | ||| | |||||| || Sbjct 9501451 GCACTTTGGGCTT---CCCTCCCTCGCTCACCACCCGGAATGGCCAGTGTTTCATGTCCG 9501395 Query 7908 CTTGGACCTGTTG-GTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTG 7966 || ||| || | |||| || || | ||||| || | ||| ||||| || | ||| Sbjct 9501394 ACTGCACC-GTAGCGTCCTCGAATTTCCGCCCGATCAGCCTCTTGGCATCGAAGATGGTG 9501336 Query 7967 TTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTT 8026 || ||||||||||||| ||||||||| || ||||| ||||| || || || | Sbjct 9501335 TTGGTGGGGTTCATGGCCACTTGGTTCTTGGCTGCGTCGCCGATGAGGCGCTC---GGTG 9501279 Query 8027 TCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCT 8086 || || || || ||||| ||||| ||||| || || ||||| || || || || || Sbjct 9501278 TCGGTGAAGGCCACGTAACTGGGGGTGGTTCGGTTGCCCTGGTCATTGGCGATGATCTCC 9501219 Query 8087 ACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATT 8146 || | | | ||| |||| || || || || || || || || | || || ||||| Sbjct 9501218 ACCTTGCCATGTTGGAAGACCCCCACACAGGAGTAGGTGGTGCCCAGGTCGATGCCGATG 9501159 Query 8147 GC 8148 || Sbjct 9501158 GC 9501157 >seq3087 Length=11989055 Score = 271 bits (300), Expect = 1e-67 Identities = 833/1271 (66%), Gaps = 28/1271 (2%) Strand=Plus/Minus Query 6889 CTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTC 6948 ||| | |||||| || | ||| ||| | || | || |||||| | ||||| || || Sbjct 11211717 CTTGGTTGGAATGGTGGCATTCCTCTGGATTAGCGTGGTCATCACCCCACCTGCTGTCTC 11211658 Query 6949 GAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCC 7008 || || || ||||| || | ||| |||| || | ||||| || || ||| | | Sbjct 11211657 CAGCCCCAGTGACAGGGGAGCCACATCCAGCAGCAGGAGGTCCTGTACT--TTCTCACAC 11211600 Query 7009 TT--CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGG 7066 || | ||| | || | || || || || | ||||| || || || |||||||| || Sbjct 11211599 TTGTCCCCCATCAACACTGCTGCCTGCACAGCAGCCCCATAGGCCACAGCCTCATCAGGA 11211540 Query 7067 TTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTC 7126 || || |||| ||||| ||||| || || || ||||| | | || || | || Sbjct 11211539 TTGATGCTTTTGTTCAGCTCTTTGCCATTGAAGAAATCCTGCAGTAGTTTCTGCACCTTA 11211480 Query 7127 GGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTT 7186 ||||| | || || ||||| || | | || |||| | || | || | | ||| Sbjct 11211479 GGGATGCAGGTGGAACCACCCACTAGGATGACATCATGGATTTGGGCCTTGCCCAGCTTG 11211420 Query 7187 GAGTCTCGAAGTGTTTTTTCGACAGGTTCCA---TACATTTACGGAACAAGTCCATACAC 7243 | ||| | || | || || ||||| |||| ||| | ||||| | ||||| ||| Sbjct 11211419 GCATCTTGCAGAGCCTTCTCCACAGGCTCCAAGGTACTT---CGGAAGAGGTCCAAGCAC 11211363 Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || |||||||| || ||||| || ||||| || ||||| || || || ||| ||| || Sbjct 11211362 AGCTCCTCAAAGCGGGCACGAGTGATGGACGTGTAGAAGTCCACACCTTCGAATAGGGAG 11211303 Query 7304 TCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCC 7363 ||||| || | || | || | | || || || || ||||| ||||||||||| || Sbjct 11211302 TCAATCTCCAGAGTGGCCTGAGTGCTTGAGGACAAAGTGCGCTTGGCGCGCTCACAGGCT 11211243 Query 7364 GTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTA 7423 || || | | ||||| || ||| ||| || | ||| ||| ||| || || | Sbjct 11211242 GTGCGCAGTCTGCGAAGAGCCCGCTTGTTGCCACTCACATCCTTCCCATGCTTCCGCCGA 11211183 Query 7424 AACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTA 7483 ||||| || ||||| | || | ||||| || || ||||||| ||| || Sbjct 11211182 AACTCCTCCACAAAGTGGTTCACCAGCCGGTTGTCGAAGTCCTCTCCACCCAGGTGAGTG 11211123 Query 7484 TCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCA 7543 || || || || || || || ||||||| ||| || ||||| | | | || |||||| Sbjct 11211122 TCTCCAGCCGTGGCCTTCACCTCAAAGACACCACCGTCAATAGTGAGAACAGACACATCA 11211063 Query 7544 AACGTACCACCACCCAGGTCAAAAATGAGTACGTT-CG-TATCGTCGTCTTTGTTCTTAT 7601 || || || ||||| |||||||||||||| || || || | || | | || | | | Sbjct 11211062 AAAGTGCCTCCACCGAGGTCAAAAATGAGCACATTACGCTCTCCTGCCCCATG--CCTGT 11211005 Query 7602 CGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGC 7661 | || ||||| ||||| || || || || || || || || || | || ||| || | Sbjct 11211004 CCAGCCCGTAAGCGATGGCGGCTGCAGTGGGCTCGTTGATGATCCTGAGCACGTTGAGCC 11210945 Query 7662 CAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGA 7721 | || |||| | ||||| || || || || || || || ||||| |||||||| || | Sbjct 11210944 CCGCGATAGCCCCTGCATCCTTGGTGGCCTGGCGCTGTGAGTCGTTGAAGTAGGCAGGTA 11210885 Query 7722 CCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTT 7781 | || | ||||||| | | || || || || ||| || || | || ||||| | Sbjct 11210884 CTGTGATCACCGCGTTCCTCACAGGCTGGCCCAGGTACATCTCAGCAGTCTCCTTCATCT 11210825 Query 7782 TGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGT-TTCAC--CGTTAA 7838 || | || ||||| ||||| |||||||| | ||| || | || || | || ||| Sbjct 11210824 TGCTCAGCACCATGGATGAGATCTCTTCGGGGTTGAAC-GTCTTGTACTCCCCACGGTAA 11210766 Query 7839 AATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTT 7898 | || ||| |||| || |||| | | | |||| | | ||| | | Sbjct 11210765 GA--CACGCGCATCTTGGGCTT-GCCGC--CTTCACTCACCACCTGGAAGGGCCAGTGCT 11210711 Query 7899 TCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAA 7958 ||||||| || || ||| || ||||| | ||| || || ||||| || || | Sbjct 11210710 TCATATCTGACTGCACGGTCACGTCTGAGAACTTGCGTCCTATCAGCCGCTTGGCGTCGA 11210651 Query 7959 AAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTT 8018 | || ||||| | ||||||| ||| | ||| |||| || ||||| || | || |||| Sbjct 11210650 ACACCGTGTTGTGCGGGTTCAGGGCCGCTTGACTCTTGGCAGCGTCGCCCACCAGTCGTT 11210591 Query 8019 CATTATTTTCCGTAAACGCGACGTACGATGGG-GTCGTTCGATTCCCTTGGTCGTTCGCA 8077 | | || || || || || || | |||| || || || || || |||||||| ||| Sbjct 11210590 C---GGTGTCGGTGAAGGCCACATA-GCTGGGCGTAGTGCGGTTGCCCTGGTCGTTGGCA 11210535 Query 8078 ATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCA 8137 | || || || | ||| || | ||||| |||||||| |||| || || | ||| Sbjct 11210534 AGGATCTCCACCTTGCCGTGCTGGAACACGCCCACGCACGAGAACGTGGTGCCCAGATCG 11210475 Query 8138 ATACCGATTGC 8148 || || || || Sbjct 11210474 ATGCCAATCGC 11210464 >seq3128 Length=41762041 Score = 224 bits (248), Expect = 1e-53 Identities = 1008/1581 (64%), Gaps = 32/1581 (2%) Strand=Plus/Minus Query 6581 TTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTA 6640 || ||||| ||||| || || ||||| || || || || || | | ||||| Sbjct 41156984 TTGTACTTCTCCGCCTCCTGCACCATGCGCTCGATCTCCTCCTTGCTCAGGCGGCCCTTG 41156925 Query 6641 TCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTC 6700 || || || || || ||||| | || || || | | ||| || || | || || Sbjct 41156924 TCGTTGGTGATGGTGATCTTGTTGGCCTTGCCGGTGCTCTTGTCGGTGGCCGTGACGTTG 41156865 Query 6701 AAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTC--GGTG 6758 | || || || || || | ||||| |||| | || || || ||||||| || | Sbjct 41156864 AGGATGCCGTTGGCGTCGATGTCGAAGGTTACCTCGATCTGAGGA--ACCCCTCTGGGAG 41156807 Query 6759 CGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTAC 6818 ||| ||||| || || || ||||| || || | |||||||| ||| | | || Sbjct 41156806 CGGGGGGAATTCCAGTCAAGTCAAAACGGCCCAGCAGGTTGTTATCCTTCGTCATGGCAC 41156747 Query 6819 GTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGA 6878 ||||||| || || || | || |||| | || || || || || | |||| Sbjct 41156746 GTTCACCCTCGTACACCTGGATCAGCACCCCGGGCTGGTTGTCAGAATATGTGGTAAAGA 41156687 Query 6879 TTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCAC 6938 | || || ||| | || || || | || | | || | ||||| | ||||| Sbjct 41156686 TCTGCGTTTGCTTGGTGGGGATGGTGGAGTTGCGCTTGATCAGGACAGTCATCACACCAC 41156627 Query 6939 CCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAG 6998 | || || | ||| || ||||| || | ||| |||| | | ||| || || || Sbjct 41156626 CTGCCGTCTCCAATCCCAGGGACAGGGGCGCCACATCCAGCAAAAGCAGATCCTGCACCT 41156567 Query 6999 ATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCT 7058 |||| | || ||| | || || || || || || | |||||||| || || || | Sbjct 41156566 TTTCGGACTTGTCCCCCATCAAAATAGCTGCCTGTACTGCAGCCCCGTAGGCTACTGCTT 41156507 Query 7059 CATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTT 7118 |||| ||||| || | || || || || ||||||||||| ||| | || | | Sbjct 41156506 CATCAGGGTTGATGCTCTTGTTGAGATCACGGCCGTTAAAATAGTCCTGAAGCAGCTTCT 41156447 Query 7119 GAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTAT 7178 | | || ||||| ||||| || ||||| || || || || |||| | || | || | Sbjct 41156446 GCACCTTAGGGATGCGTGTGGAGCCACCTACTAACACAATGTCATGGATGTTAGCCTTGT 41156387 Query 7179 CGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA---TACATTTACGGAACAAGT 7235 | ||||| | || || || | || || || || |||| | | || |||| || Sbjct 41156386 CCATCTTGGCATCCCGGAGAGCCTTCTCCACGGGCTCCAGGGTGCCCCTA---AACAGGT 41156330 Query 7236 CCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGT 7295 | ||||| || ||||| || || | ||| |||||||| ||||| ||||| || || Sbjct 41156329 CTGCACACAACTCTTCAAACCGGGCTCTGGTGATGGATGTGTAGAAGTCAACACCTTCAA 41156270 Query 7296 ATAACGAATCAATTTCAATGGTTG---TTTGTGCCGTCGAAGATAACGTTCGCTTTGCGC 7352 | | ||||| || || | ||||| | |||| | ||||| | ||| | ||| || | Sbjct 41156269 AAAGTGAATCGATCTCCA-GGTTGGCCTGGGTGC--TGGAAGACAGCGTCCTCTTGGCCC 41156213 Query 7353 GCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTAT 7412 |||| || || || || | || | | || ||| ||| | || || ||||| | Sbjct 41156212 GCTCGCAGGCGGTGCGCAGCCGCCTCACCGCCCGCTTGTTCTGGCTGATGTCCTTCTTGT 41156153 Query 7413 GTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCAC 7472 | || | || ||||| || |||||| | | || | ||||| || || || | Sbjct 41156152 GCTTCCTCTTGAACTCCTCCACGAAGTGGCTGACAAGCCGGTTGTCGAAGTCCTCCCCGC 41156093 Query 7473 CCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACA 7532 ||| |||||| || ||||| || || || || || ||||| || | || ||| | | | Sbjct 41156092 CCAGGTGTGTGTCACCCGCCGTGGCCTTCACCTCGAAGATGCCGTCGTCGATGGTCAGGA 41156033 Query 7533 ACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTT 7592 || || || ||||| || || |||||||| || ||||| |||| || || || | | Sbjct 41156032 TGGACACGTCGAACGTGCCGCCGCCCAGGTCGAAGATGAGGACGT--GTCTC-TCTCCCT 41155976 Query 7593 ----TGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATAC-G 7647 || | ||||| | |||||| || || || || || || || || || || || | | Sbjct 41155975 GACCTGCT-TTATCCAAACCGTAGGCAATGGCAGCAGCTGTGGGCTCGTTGATGATTCTG 41155917 Query 7648 AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTT 7707 | ||| || || || || || | ||||| || || ||||| || || || || || Sbjct 41155916 AGCACA-TTGAGTCCTGCGATCACACCTGCATCCTTGGTGGCTTGGCGCTGAGAGTCATT 41155858 Query 7708 AAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGC 7767 || ||||| || || || | || || | |||| | || | | | | || || Sbjct 41155857 GAAATAGGCTGGCACAGTGATCACGGCATTGGTGATAGGGTGGCCCAAAAAGGCCTCTGC 41155798 Query 7768 GATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGT 7827 | || ||||| || || || ||||| ||||| ||||| || | || ||| | Sbjct 41155797 AGTCTCCTTCATCTTTGTCAGCACCATTGATGAGATCTCCTCGGGGTAGAAAGCTTTATT 41155738 Query 7828 TTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATA 7887 || || || | || | | | |||| || || | | | ||| || | | | Sbjct 41155737 CTCCCCTTTGTAGGACACCACCACCTTGGGCTT-GCCTC--CTTCATTGATCACTTGAAA 41155681 Query 7888 CGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACG 7947 | |||| |||||||| || || | || ||||| | ||||| ||||| Sbjct 41155680 AGGCCAAAGCTTCATATCTGACTGCACAACAGGATCGTTGAACTTCCGGCCGATCAGACG 41155621 Query 7948 CTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCC 8007 || |||||||| || ||||| | ||| |||||||| |||||||| ||||| ||||| Sbjct 41155620 TTTGGCATCAAAGACGGTGTTCTGGGGATTCATGGCCACCTGGTTCTTGGCCGCATCCCC 41155561 Query 8008 GATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTG 8067 ||| || || || | || |||||||| ||||| ||||| || || || || || Sbjct 41155560 GATCAGCCGCTC---GGTGTCAGTAAACGCCACGTAGCTGGGGGTGGTGCGGTTGCCCTG 41155504 Query 8068 GTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGT 8127 |||||| || || || || || | ||| || | || || || || || || || || Sbjct 41155503 GTCGTTGGCGATGATCTCCACTTTGCCGTGCTGGAACACCCCCACACATGAGTAGGTGGT 41155444 Query 8128 TCCTAAATCAATACCGATTGC 8148 || || || || || ||||| Sbjct 41155443 GCCCAAGTCGATGCCAATTGC 41155423 >seq3099 Length=15920349 Score = 129 bits (142), Expect = 7e-25 Identities = 237/345 (69%), Gaps = 2/345 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || |||||||| ||||| ||||| || || || || | | ||| ||||||||||| || Sbjct 2306938 TCAAAATCTTCTCCACCTAAGTGGGTGTCACCAGCTATAGATTTCACTTCAAAGATTCCA 2306879 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 ||||||| | | | || |||||||| || ||||| || | | |||||| || || Sbjct 2306878 TCTTCAATAGTGAGGACTGACACATCAAAAGTGCCACCTCCTAAATAAAAAATCAGCACA 2306819 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || | || | | | || || || | || || || ||||| || | ||||| ||| Sbjct 2306818 TTTCTTTCAGCTCCAATCTTTTTCTCTAAGCCATAGGCAATAGCAGCATCTGTTGGCTCA 2306759 Query 7637 TTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || ||||| | ||| ||| || || |||||||| | ||| |||| ||| || || || | Sbjct 2306758 TTGATAATTCTAAGTACA-TTAAGACCAGCAATGGCTGCAGCATTTTTGGTTGCCTGATG 2306700 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || || |||||||| || || || || || || || | || |||| || || Sbjct 2306699 ATGACGGTCATTAAAGTAAGCTGGCACAGTAACTACAGCAATGATAACAGTCTTCCCAAG 2306640 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGA 7800 ||| | ||| | | || ||||| || || || ||||| ||||| Sbjct 2306639 ATAAGCTTCTTCAGTTTCCTTCATCTTTGTCAGCACCATAGATGA 2306595 >seq3108 Length=23989115 Score = 113 bits (124), Expect = 6e-20 Identities = 234/345 (68%), Gaps = 5/345 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || ||||||||| | | ||| || || || || | | ||| ||||||||||| || Sbjct 13304432 TCAAAATCTTCATCTAC---GTGGGTGTCTCCAGCTTTAGATTTCACTTCAAAGATTCCA 13304488 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 ||||||| | | | || |||||||| | ||||| | | |||||| | || || Sbjct 13304489 TCTTCAATAGTGAGGATTGACACATCAAAAATGCCACCTACTAAATCAAAAGTCAGCACA 13304548 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || | || | | || || || || || || || | ||| || || ||||| ||| Sbjct 13304549 TTTCTTTCAGCTCCAACCTTTTTGTCTAGGCCATAGGCAACAGCAGCAGCTGTTGGCTCA 13304608 Query 7637 TTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || ||||| | || ||| || || |||||||| || | ||| |||| || || || | Sbjct 13304609 TTGATAATTCTAAATACA-TTAAGACCAGCAATGTTTCCAGCAACTTTGGTTGCCTGACA 13304667 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || || || |||||||| || || | || || || || | || || |||| || || Sbjct 13304668 CTGAGAGTCATTAAAGTAAGCTGGCTCAGTGACCACAGCATTGGTAACAGTCTTCCCAAG 13304727 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGA 7800 ||| | ||| || || || ||||| || || || ||||| ||||| Sbjct 13304728 ATAAGCTTCTGCAATTTCCTTCATCTTTGTCAGCACCATAGATGA 13304772 >seq3114 Length=26790417 Score = 102 bits (112), Expect = 1e-16 Identities = 354/548 (65%), Gaps = 16/548 (3%) Strand=Plus/Plus Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306 || ||||| || ||| | |||||||| |||||||| || | | || || | |||||| Sbjct 7927303 TCTTCAAATCGAGCATGAGTAATGGAGGTATAGAAGTCGAATGCTTCATAGAGGGAATCA 7927362 Query 7307 ATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTT 7366 || ||||| | | ||| | | ||||| | ||| ||| || | ||||| || || Sbjct 7927363 ATCTCAATACTAGCTTGGGTGCTGGAAGAAAGGATTCTCTTAGCTCATTCACATGCAGTA 7927422 Query 7367 CGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAAC 7426 | | | || | || | | ||| | || || |||||||| || | ||||| Sbjct 7927423 TGAAGTTGGCGGACAGCTCTCTTGTTCTCATTGATGTCCTTCTTATGCTTGTGCTTAAAT 7927482 Query 7427 TCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCC 7486 || || || || | | || |||||||| ||||| ||||| | || Sbjct 7927483 TCGGCAATAAAATGG----------TTG--TCAAAATCTTCTCCACCTAAGTGGATGTCT 7927530 Query 7487 CCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAAC 7546 || || | | ||| ||||||||||| || ||||||| | | || |||||||| Sbjct 7927531 CCAGCTTTAGATTTCACTTCAAAGATTCCATCTTCAATAATGAGATTTGACACATCAAAA 7927590 Query 7547 GTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGA 7606 | ||| | || | |||||| || | || | || | | || || || | Sbjct 7927591 TTGTCACTCCTGAG-TAAAAAATCAGCATATTTCTTTCAGCACCAACCTTTTTGTCTAAG 7927649 Query 7607 CCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGC 7665 | || || ||||| || || |||| || ||| ||||| | ||| ||| || || ||||| Sbjct 7927650 CAATAGGCAATAGCAGCAGCTGTTGCTT-ATTGATAATTCTAAGTACA-TTAAGACCAGC 7927707 Query 7666 AATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGT 7725 ||||||| | |||||| | || || || | || ||||| |||||||| || || || || Sbjct 7927708 AATAGTTCCAGCATCTGTGGTTGCCTGATGCTGAGAATCATTAAAGTAAGCTGGCACAGT 7927767 Query 7726 TACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGT 7785 || || || | || || | || || ||||| ||| | ||| || |||| || || Sbjct 7927768 AACCACAGCATTGGTAACAGTGTTCCCAAGATAAATTTCTGTGATTTCCTTCACCTTTGT 7927827 Query 7786 AAGAACCA 7793 || |||| Sbjct 7927828 CAGCACCA 7927835 >seq3133 Length=50759066 Score = 93.3 bits (102), Expect = 5e-14 Identities = 192/282 (68%), Gaps = 14/282 (5%) Strand=Plus/Plus Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609 ||||||| |||||||| | || | |||| | || | || | || ||| || || Sbjct 19048767 CCACCACATAGGTCAAATACCAGGATGTTCTTCTCTCCCTCCCT---CTCATCCAGGCCA 19048823 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669 || ||||| || || || || || ||||| || || | | | ||| | |||| | Sbjct 19048824 TAAGCGATGGCAGCTGCTGTCGGCTCATTGATGATCCTCATAACGTTGCGTTTAGCACTT 19048883 Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTAC- 7728 ||| | |||||||| || ||||| ||| ||||||||||| || || || | Sbjct 19048884 GTTCCAGCATCTTTGGTTGCTTGC--------ATCATTAAAGTAGGCAGGTACAGTAAAA 19048935 Query 7729 GACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAG 7788 ||| || | || || ||||| || | ||||| ||| | | ||||||||||| || || Sbjct 19048936 GACTGCATGAGTAACCTTCTTTCCCAAATACGCCTCCACACTTTCTTTCATTTTAGTGAG 19048995 Query 7789 AACCATCGATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTT 7829 |||||| | ||||| ||||| | ||||| ||| || |||| Sbjct 19048996 AACCATGGCAGAAATTTCTTCTGGAGCAAA-TGTCTTGGTTT 19049036 >seq3134 Length=59225736 Score = 84.2 bits (92), Expect = 3e-11 Identities = 279/427 (65%), Gaps = 8/427 (2%) Strand=Plus/Minus Query 6943 AGTTTCGAGT-CCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATT 7001 |||||| ||| |||||||| ||||| || || ||||| || | || ||||||||| || Sbjct 50880704 AGTTTC-AGTACCAAGAGAAAGAGGAGTGACATCCAAAAGCAGCAAATCTTGAACATTTT 50880646 Query 7002 CGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCAT 7061 | | || || | || ||||| || || || | | || || | || ||||| | Sbjct 50880645 CAGACTTATCTCCAGATAGAATGGCAGCCTGAACAGCTGAACCATAAGTAACAGCCTCCT 50880586 Query 7062 CGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAA 7121 | ||||| || | |||||||||||||| || || ||| | || || | | || | Sbjct 50880585 CAGGGTTGATGCTCTTATTCAGTTCTTTTCCATTGAAAAAGTCTTGTAGGAGCTTGTGGA 50880526 Query 7122 TTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCA-CTTTCGATTTATCG 7180 | || ||||| | | || ||||| || || | |||| | || || | || || Sbjct 50880525 TCTTGGGGATATGAATAGAGCCACCCACTTGGACATTGTCATGGATCTGTC-ACTTGTCA 50880467 Query 7181 ATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATA 7240 | || | ||| |||| | || || |||| |||| | || ||| | ||||| | Sbjct 50880466 AGTTTGGCATCTTGAAGAGCCTTCTCCTCAGGGTCCAGAGTGCCACAGAATAGGTCCACA 50880407 Query 7241 CACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAAC 7300 ||| || ||||| | |||| |||||||| | ||| |||| || || || | Sbjct 50880406 TTCAGCTCTTCAAACTGAGCACAAGTAATGGAGACACAGATGTCAATTCCTTCATAGAGG 50880347 Query 7301 GAATCAATTTCAATGGTTGTTTG--TGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCAC 7358 |||||||| ||| | | | ||| ||| | ||||| || ||| ||| || | |||| Sbjct 50880346 GAATCAATCTCAGTCCTGGCTTGGATGC--TGGAAGAGAAGATTCTCTTAGCTTGTTCAC 50880289 Query 7359 ACGCCGT 7365 | || || Sbjct 50880288 ATGCAGT 50880282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635107839280960