Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cavia_20porcellus_20[refseq_20GCF_5F000151735.1_202008-03-03]
3,144 sequences; 2,723,219,641 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq3123 304 2e-77
seq3087 271 1e-67
seq3128 224 1e-53
seq3099 129 7e-25
seq3108 113 6e-20
seq3114 102 1e-16
seq3133 93.3 5e-14
seq3134 84.2 3e-11
>seq3123
Length=34170112
Score = 304 bits (336), Expect = 2e-77
Identities = 830/1262 (66%), Gaps = 18/1262 (1%)
Strand=Plus/Minus
Query 6896 GGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCA 6955
|| ||||| || || ||| || | ||||||||| | || ||| || |||| ||
Sbjct 9502409 GGGATCGTGGTGTTCCTCTTGATGAGCGGGGTCATGACGCCGCCCGCCGTCTCGATGCCC 9502350
Query 6956 AGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCC 7015
|| ||||| || |||||||| | || | ||| || || || || | || ||
Sbjct 9502349 AGCGACAGGGGGGTCACGTCGAGCAGCAGCAGATCCTGCACGTTCTCAGACTTGTCGCCG 9502290
Query 7016 GTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTT 7075
| | |||||| || || |||| ||| ||||| || || ||||| |||||||| || |
Sbjct 9502289 ATGAGGATGGCCGCCTGCACCGCCGCGCCGTAGGCCACTGCCTCGTCGGGGTTGATGCTC 9502230
Query 7076 TTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGT 7135
|| ||||| || || ||||| || ||||| | || | || || || ||||| ||
Sbjct 9502229 TTGTTCAGCTCCTTGCCGTTGAAGAAATCCTGCAGCAGCTTCTGGATCTTGGGGATGCGA 9502170
Query 7136 GTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGA 7195
|| || || || |||| ||||| || | | | || || | ||| | ||| ||
Sbjct 9502169 GTGGAGCCGCCCACCAGCACGATCTCCTGGATCTGGCCCTTGTCCAACTTGGCGTCGCGC 9502110
Query 7196 AGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAA 7255
|| | || || || || |||| ||||| | ||| || ||||||||
Sbjct 9502109 AGCGCCTTCTCCACCGGCTCCAGGGTCCCGCGGAAGAGGTCGGCGTTGAGCTCCTCAAAG 9502050
Query 7256 CGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATG 7315
|| || ||||| ||||| || ||||| || ||||| ||||| | || || || ||||||
Sbjct 9502049 CGGGCGCGGGTGATGGACGTGTAGAAGTCCACGCCCTCGTACAGAGAGTCGATCTCAATG 9501990
Query 7316 GTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGA 7375
| | || | | ||| | || ||||| |||||||| || ||||| || | ||
Sbjct 9501989 CTGGCCTGGGTGGACGAGCTCAGGGTGCGCTTGGCGCGCTCGCAGGCCGTGCGAAGTCGC 9501930
Query 7376 CGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAG 7435
|| | || || ||| ||| || |||||||| || || || ||||| ||||
Sbjct 9501929 CGCACCGCGCGTTTGTTGGGCACAATGTCCTTCTTATGCTTGCGCTTGAACTCCTCAGCC 9501870
Query 7436 AAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTC 7495
| ||| | || | | ||||| || || || |||| ||| || || || || ||
Sbjct 9501869 AGGTGGCTAACCATGCGGTTGTCGAAGTCCTCGCCGCCCAGGTGGGTGTCGCCGGCTGTG 9501810
Query 7496 GCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCA 7555
| || || || ||||| || | || ||| | | | || || || || ||||| ||
Sbjct 9501809 GACTTCACCTCGAAGATGCCGTCCTCGATGGTCAGGATGGACACGTCGAAGGTACCGCCG 9501750
Query 7556 CCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG------TTCTTATCGAGACCG 7609
||||||||||| ||||| || ||| | ||| || || | ||||| || || |||
Sbjct 9501749 CCCAGGTCAAAGATGAGCACATTCTTCTCGCCGCCTGCGCAGCCCTTCTTGTCCAGGCCG 9501690
Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAAT 7668
|| || || || ||||| || || ||||| ||||| || || ||| || ||||| | ||
Sbjct 9501689 TAGGCAATGGCGGCCGCAGTAGGCTCATTGATAATCCGCAGCACA-TTGAGGCCGGTGAT 9501631
Query 7669 AGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTAC 7728
||| ||||||| || || || || || || || ||||| || |||||||||||||| |
Sbjct 9501630 AGTGCCCGCATCCTTGGTGGCCTGGCGCTGGGAGTCGTTGAAATAGGCCGGGACCGTGAT 9501571
Query 7729 GACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAG 7788
||| ||| | ||||| || || || | || ||||| || ||||| || || ||
Sbjct 9501570 GACAGCGCTCTGCACTTTGCCTCCCAGGTAGGCCTCGGCGATCTCCTTCATCTTTGTGAG 9501511
Query 7789 AACCATCGATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCAACTT 7847
||||| || || ||||| || | | | | || ||| | || || || | || || |
Sbjct 9501510 CACCATGGAAGAGATCTCCTCCG-GGAAGAAGGTCTTCATCTCCCCCTTGTACTCCACCT 9501452
Query 7848 CAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGT 7907
| |||| || | | | || | ||| | | ||| | |||||| ||
Sbjct 9501451 GCACTTTGGGCTT---CCCTCCCTCGCTCACCACCCGGAATGGCCAGTGTTTCATGTCCG 9501395
Query 7908 CTTGGACCTGTTG-GTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTG 7966
|| ||| || | |||| || || | ||||| || | ||| ||||| || | |||
Sbjct 9501394 ACTGCACC-GTAGCGTCCTCGAATTTCCGCCCGATCAGCCTCTTGGCATCGAAGATGGTG 9501336
Query 7967 TTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTT 8026
|| ||||||||||||| ||||||||| || ||||| ||||| || || || |
Sbjct 9501335 TTGGTGGGGTTCATGGCCACTTGGTTCTTGGCTGCGTCGCCGATGAGGCGCTC---GGTG 9501279
Query 8027 TCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCT 8086
|| || || || ||||| ||||| ||||| || || ||||| || || || || ||
Sbjct 9501278 TCGGTGAAGGCCACGTAACTGGGGGTGGTTCGGTTGCCCTGGTCATTGGCGATGATCTCC 9501219
Query 8087 ACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATT 8146
|| | | | ||| |||| || || || || || || || || | || || |||||
Sbjct 9501218 ACCTTGCCATGTTGGAAGACCCCCACACAGGAGTAGGTGGTGCCCAGGTCGATGCCGATG 9501159
Query 8147 GC 8148
||
Sbjct 9501158 GC 9501157
>seq3087
Length=11989055
Score = 271 bits (300), Expect = 1e-67
Identities = 833/1271 (66%), Gaps = 28/1271 (2%)
Strand=Plus/Minus
Query 6889 CTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTC 6948
||| | |||||| || | ||| ||| | || | || |||||| | ||||| || ||
Sbjct 11211717 CTTGGTTGGAATGGTGGCATTCCTCTGGATTAGCGTGGTCATCACCCCACCTGCTGTCTC 11211658
Query 6949 GAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCC 7008
|| || || ||||| || | ||| |||| || | ||||| || || ||| | |
Sbjct 11211657 CAGCCCCAGTGACAGGGGAGCCACATCCAGCAGCAGGAGGTCCTGTACT--TTCTCACAC 11211600
Query 7009 TT--CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGG 7066
|| | ||| | || | || || || || | ||||| || || || |||||||| ||
Sbjct 11211599 TTGTCCCCCATCAACACTGCTGCCTGCACAGCAGCCCCATAGGCCACAGCCTCATCAGGA 11211540
Query 7067 TTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTC 7126
|| || |||| ||||| ||||| || || || ||||| | | || || | ||
Sbjct 11211539 TTGATGCTTTTGTTCAGCTCTTTGCCATTGAAGAAATCCTGCAGTAGTTTCTGCACCTTA 11211480
Query 7127 GGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTT 7186
||||| | || || ||||| || | | || |||| | || | || | | |||
Sbjct 11211479 GGGATGCAGGTGGAACCACCCACTAGGATGACATCATGGATTTGGGCCTTGCCCAGCTTG 11211420
Query 7187 GAGTCTCGAAGTGTTTTTTCGACAGGTTCCA---TACATTTACGGAACAAGTCCATACAC 7243
| ||| | || | || || ||||| |||| ||| | ||||| | ||||| |||
Sbjct 11211419 GCATCTTGCAGAGCCTTCTCCACAGGCTCCAAGGTACTT---CGGAAGAGGTCCAAGCAC 11211363
Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303
|| |||||||| || ||||| || ||||| || ||||| || || || ||| ||| ||
Sbjct 11211362 AGCTCCTCAAAGCGGGCACGAGTGATGGACGTGTAGAAGTCCACACCTTCGAATAGGGAG 11211303
Query 7304 TCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCC 7363
||||| || | || | || | | || || || || ||||| ||||||||||| ||
Sbjct 11211302 TCAATCTCCAGAGTGGCCTGAGTGCTTGAGGACAAAGTGCGCTTGGCGCGCTCACAGGCT 11211243
Query 7364 GTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTA 7423
|| || | | ||||| || ||| ||| || | ||| ||| ||| || || |
Sbjct 11211242 GTGCGCAGTCTGCGAAGAGCCCGCTTGTTGCCACTCACATCCTTCCCATGCTTCCGCCGA 11211183
Query 7424 AACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTA 7483
||||| || ||||| | || | ||||| || || ||||||| ||| ||
Sbjct 11211182 AACTCCTCCACAAAGTGGTTCACCAGCCGGTTGTCGAAGTCCTCTCCACCCAGGTGAGTG 11211123
Query 7484 TCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCA 7543
|| || || || || || || ||||||| ||| || ||||| | | | || ||||||
Sbjct 11211122 TCTCCAGCCGTGGCCTTCACCTCAAAGACACCACCGTCAATAGTGAGAACAGACACATCA 11211063
Query 7544 AACGTACCACCACCCAGGTCAAAAATGAGTACGTT-CG-TATCGTCGTCTTTGTTCTTAT 7601
|| || || ||||| |||||||||||||| || || || | || | | || | | |
Sbjct 11211062 AAAGTGCCTCCACCGAGGTCAAAAATGAGCACATTACGCTCTCCTGCCCCATG--CCTGT 11211005
Query 7602 CGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGC 7661
| || ||||| ||||| || || || || || || || || || | || ||| || |
Sbjct 11211004 CCAGCCCGTAAGCGATGGCGGCTGCAGTGGGCTCGTTGATGATCCTGAGCACGTTGAGCC 11210945
Query 7662 CAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGA 7721
| || |||| | ||||| || || || || || || || ||||| |||||||| || |
Sbjct 11210944 CCGCGATAGCCCCTGCATCCTTGGTGGCCTGGCGCTGTGAGTCGTTGAAGTAGGCAGGTA 11210885
Query 7722 CCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTT 7781
| || | ||||||| | | || || || || ||| || || | || ||||| |
Sbjct 11210884 CTGTGATCACCGCGTTCCTCACAGGCTGGCCCAGGTACATCTCAGCAGTCTCCTTCATCT 11210825
Query 7782 TGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGT-TTCAC--CGTTAA 7838
|| | || ||||| ||||| |||||||| | ||| || | || || | || |||
Sbjct 11210824 TGCTCAGCACCATGGATGAGATCTCTTCGGGGTTGAAC-GTCTTGTACTCCCCACGGTAA 11210766
Query 7839 AATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTT 7898
| || ||| |||| || |||| | | | |||| | | ||| | |
Sbjct 11210765 GA--CACGCGCATCTTGGGCTT-GCCGC--CTTCACTCACCACCTGGAAGGGCCAGTGCT 11210711
Query 7899 TCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAA 7958
||||||| || || ||| || ||||| | ||| || || ||||| || || |
Sbjct 11210710 TCATATCTGACTGCACGGTCACGTCTGAGAACTTGCGTCCTATCAGCCGCTTGGCGTCGA 11210651
Query 7959 AAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTT 8018
| || ||||| | ||||||| ||| | ||| |||| || ||||| || | || ||||
Sbjct 11210650 ACACCGTGTTGTGCGGGTTCAGGGCCGCTTGACTCTTGGCAGCGTCGCCCACCAGTCGTT 11210591
Query 8019 CATTATTTTCCGTAAACGCGACGTACGATGGG-GTCGTTCGATTCCCTTGGTCGTTCGCA 8077
| | || || || || || || | |||| || || || || || |||||||| |||
Sbjct 11210590 C---GGTGTCGGTGAAGGCCACATA-GCTGGGCGTAGTGCGGTTGCCCTGGTCGTTGGCA 11210535
Query 8078 ATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCA 8137
| || || || | ||| || | ||||| |||||||| |||| || || | |||
Sbjct 11210534 AGGATCTCCACCTTGCCGTGCTGGAACACGCCCACGCACGAGAACGTGGTGCCCAGATCG 11210475
Query 8138 ATACCGATTGC 8148
|| || || ||
Sbjct 11210474 ATGCCAATCGC 11210464
>seq3128
Length=41762041
Score = 224 bits (248), Expect = 1e-53
Identities = 1008/1581 (64%), Gaps = 32/1581 (2%)
Strand=Plus/Minus
Query 6581 TTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTA 6640
|| ||||| ||||| || || ||||| || || || || || | | |||||
Sbjct 41156984 TTGTACTTCTCCGCCTCCTGCACCATGCGCTCGATCTCCTCCTTGCTCAGGCGGCCCTTG 41156925
Query 6641 TCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTC 6700
|| || || || || ||||| | || || || | | ||| || || | || ||
Sbjct 41156924 TCGTTGGTGATGGTGATCTTGTTGGCCTTGCCGGTGCTCTTGTCGGTGGCCGTGACGTTG 41156865
Query 6701 AAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTC--GGTG 6758
| || || || || || | ||||| |||| | || || || ||||||| || |
Sbjct 41156864 AGGATGCCGTTGGCGTCGATGTCGAAGGTTACCTCGATCTGAGGA--ACCCCTCTGGGAG 41156807
Query 6759 CGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTAC 6818
||| ||||| || || || ||||| || || | |||||||| ||| | | ||
Sbjct 41156806 CGGGGGGAATTCCAGTCAAGTCAAAACGGCCCAGCAGGTTGTTATCCTTCGTCATGGCAC 41156747
Query 6819 GTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGA 6878
||||||| || || || | || |||| | || || || || || | ||||
Sbjct 41156746 GTTCACCCTCGTACACCTGGATCAGCACCCCGGGCTGGTTGTCAGAATATGTGGTAAAGA 41156687
Query 6879 TTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCAC 6938
| || || ||| | || || || | || | | || | ||||| | |||||
Sbjct 41156686 TCTGCGTTTGCTTGGTGGGGATGGTGGAGTTGCGCTTGATCAGGACAGTCATCACACCAC 41156627
Query 6939 CCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAG 6998
| || || | ||| || ||||| || | ||| |||| | | ||| || || ||
Sbjct 41156626 CTGCCGTCTCCAATCCCAGGGACAGGGGCGCCACATCCAGCAAAAGCAGATCCTGCACCT 41156567
Query 6999 ATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCT 7058
|||| | || ||| | || || || || || || | |||||||| || || || |
Sbjct 41156566 TTTCGGACTTGTCCCCCATCAAAATAGCTGCCTGTACTGCAGCCCCGTAGGCTACTGCTT 41156507
Query 7059 CATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTT 7118
|||| ||||| || | || || || || ||||||||||| ||| | || | |
Sbjct 41156506 CATCAGGGTTGATGCTCTTGTTGAGATCACGGCCGTTAAAATAGTCCTGAAGCAGCTTCT 41156447
Query 7119 GAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTAT 7178
| | || ||||| ||||| || ||||| || || || || |||| | || | || |
Sbjct 41156446 GCACCTTAGGGATGCGTGTGGAGCCACCTACTAACACAATGTCATGGATGTTAGCCTTGT 41156387
Query 7179 CGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA---TACATTTACGGAACAAGT 7235
| ||||| | || || || | || || || || |||| | | || |||| ||
Sbjct 41156386 CCATCTTGGCATCCCGGAGAGCCTTCTCCACGGGCTCCAGGGTGCCCCTA---AACAGGT 41156330
Query 7236 CCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGT 7295
| ||||| || ||||| || || | ||| |||||||| ||||| ||||| || ||
Sbjct 41156329 CTGCACACAACTCTTCAAACCGGGCTCTGGTGATGGATGTGTAGAAGTCAACACCTTCAA 41156270
Query 7296 ATAACGAATCAATTTCAATGGTTG---TTTGTGCCGTCGAAGATAACGTTCGCTTTGCGC 7352
| | ||||| || || | ||||| | |||| | ||||| | ||| | ||| || |
Sbjct 41156269 AAAGTGAATCGATCTCCA-GGTTGGCCTGGGTGC--TGGAAGACAGCGTCCTCTTGGCCC 41156213
Query 7353 GCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTAT 7412
|||| || || || || | || | | || ||| ||| | || || ||||| |
Sbjct 41156212 GCTCGCAGGCGGTGCGCAGCCGCCTCACCGCCCGCTTGTTCTGGCTGATGTCCTTCTTGT 41156153
Query 7413 GTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCAC 7472
| || | || ||||| || |||||| | | || | ||||| || || || |
Sbjct 41156152 GCTTCCTCTTGAACTCCTCCACGAAGTGGCTGACAAGCCGGTTGTCGAAGTCCTCCCCGC 41156093
Query 7473 CCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACA 7532
||| |||||| || ||||| || || || || || ||||| || | || ||| | | |
Sbjct 41156092 CCAGGTGTGTGTCACCCGCCGTGGCCTTCACCTCGAAGATGCCGTCGTCGATGGTCAGGA 41156033
Query 7533 ACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTT 7592
|| || || ||||| || || |||||||| || ||||| |||| || || || | |
Sbjct 41156032 TGGACACGTCGAACGTGCCGCCGCCCAGGTCGAAGATGAGGACGT--GTCTC-TCTCCCT 41155976
Query 7593 ----TGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATAC-G 7647
|| | ||||| | |||||| || || || || || || || || || || || | |
Sbjct 41155975 GACCTGCT-TTATCCAAACCGTAGGCAATGGCAGCAGCTGTGGGCTCGTTGATGATTCTG 41155917
Query 7648 AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTT 7707
| ||| || || || || || | ||||| || || ||||| || || || || ||
Sbjct 41155916 AGCACA-TTGAGTCCTGCGATCACACCTGCATCCTTGGTGGCTTGGCGCTGAGAGTCATT 41155858
Query 7708 AAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGC 7767
|| ||||| || || || | || || | |||| | || | | | | || ||
Sbjct 41155857 GAAATAGGCTGGCACAGTGATCACGGCATTGGTGATAGGGTGGCCCAAAAAGGCCTCTGC 41155798
Query 7768 GATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGT 7827
| || ||||| || || || ||||| ||||| ||||| || | || ||| |
Sbjct 41155797 AGTCTCCTTCATCTTTGTCAGCACCATTGATGAGATCTCCTCGGGGTAGAAAGCTTTATT 41155738
Query 7828 TTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATA 7887
|| || || | || | | | |||| || || | | | ||| || | | |
Sbjct 41155737 CTCCCCTTTGTAGGACACCACCACCTTGGGCTT-GCCTC--CTTCATTGATCACTTGAAA 41155681
Query 7888 CGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACG 7947
| |||| |||||||| || || | || ||||| | ||||| |||||
Sbjct 41155680 AGGCCAAAGCTTCATATCTGACTGCACAACAGGATCGTTGAACTTCCGGCCGATCAGACG 41155621
Query 7948 CTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCC 8007
|| |||||||| || ||||| | ||| |||||||| |||||||| ||||| |||||
Sbjct 41155620 TTTGGCATCAAAGACGGTGTTCTGGGGATTCATGGCCACCTGGTTCTTGGCCGCATCCCC 41155561
Query 8008 GATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTG 8067
||| || || || | || |||||||| ||||| ||||| || || || || ||
Sbjct 41155560 GATCAGCCGCTC---GGTGTCAGTAAACGCCACGTAGCTGGGGGTGGTGCGGTTGCCCTG 41155504
Query 8068 GTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGT 8127
|||||| || || || || || | ||| || | || || || || || || || ||
Sbjct 41155503 GTCGTTGGCGATGATCTCCACTTTGCCGTGCTGGAACACCCCCACACATGAGTAGGTGGT 41155444
Query 8128 TCCTAAATCAATACCGATTGC 8148
|| || || || || |||||
Sbjct 41155443 GCCCAAGTCGATGCCAATTGC 41155423
>seq3099
Length=15920349
Score = 129 bits (142), Expect = 7e-25
Identities = 237/345 (69%), Gaps = 2/345 (1%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| |||||||| ||||| ||||| || || || || | | ||| ||||||||||| ||
Sbjct 2306938 TCAAAATCTTCTCCACCTAAGTGGGTGTCACCAGCTATAGATTTCACTTCAAAGATTCCA 2306879
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
||||||| | | | || |||||||| || ||||| || | | |||||| || ||
Sbjct 2306878 TCTTCAATAGTGAGGACTGACACATCAAAAGTGCCACCTCCTAAATAAAAAATCAGCACA 2306819
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| | || | | | || || || | || || || ||||| || | ||||| |||
Sbjct 2306818 TTTCTTTCAGCTCCAATCTTTTTCTCTAAGCCATAGGCAATAGCAGCATCTGTTGGCTCA 2306759
Query 7637 TTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695
|| ||||| | ||| ||| || || |||||||| | ||| |||| ||| || || || |
Sbjct 2306758 TTGATAATTCTAAGTACA-TTAAGACCAGCAATGGCTGCAGCATTTTTGGTTGCCTGATG 2306700
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
|| || |||||||| || || || || || || || | || |||| || ||
Sbjct 2306699 ATGACGGTCATTAAAGTAAGCTGGCACAGTAACTACAGCAATGATAACAGTCTTCCCAAG 2306640
Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGA 7800
||| | ||| | | || ||||| || || || ||||| |||||
Sbjct 2306639 ATAAGCTTCTTCAGTTTCCTTCATCTTTGTCAGCACCATAGATGA 2306595
>seq3108
Length=23989115
Score = 113 bits (124), Expect = 6e-20
Identities = 234/345 (68%), Gaps = 5/345 (1%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| ||||||||| | | ||| || || || || | | ||| ||||||||||| ||
Sbjct 13304432 TCAAAATCTTCATCTAC---GTGGGTGTCTCCAGCTTTAGATTTCACTTCAAAGATTCCA 13304488
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
||||||| | | | || |||||||| | ||||| | | |||||| | || ||
Sbjct 13304489 TCTTCAATAGTGAGGATTGACACATCAAAAATGCCACCTACTAAATCAAAAGTCAGCACA 13304548
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| | || | | || || || || || || || | ||| || || ||||| |||
Sbjct 13304549 TTTCTTTCAGCTCCAACCTTTTTGTCTAGGCCATAGGCAACAGCAGCAGCTGTTGGCTCA 13304608
Query 7637 TTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695
|| ||||| | || ||| || || |||||||| || | ||| |||| || || || |
Sbjct 13304609 TTGATAATTCTAAATACA-TTAAGACCAGCAATGTTTCCAGCAACTTTGGTTGCCTGACA 13304667
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
|| || || |||||||| || || | || || || || | || || |||| || ||
Sbjct 13304668 CTGAGAGTCATTAAAGTAAGCTGGCTCAGTGACCACAGCATTGGTAACAGTCTTCCCAAG 13304727
Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGA 7800
||| | ||| || || || ||||| || || || ||||| |||||
Sbjct 13304728 ATAAGCTTCTGCAATTTCCTTCATCTTTGTCAGCACCATAGATGA 13304772
>seq3114
Length=26790417
Score = 102 bits (112), Expect = 1e-16
Identities = 354/548 (65%), Gaps = 16/548 (3%)
Strand=Plus/Plus
Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306
|| ||||| || ||| | |||||||| |||||||| || | | || || | ||||||
Sbjct 7927303 TCTTCAAATCGAGCATGAGTAATGGAGGTATAGAAGTCGAATGCTTCATAGAGGGAATCA 7927362
Query 7307 ATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTT 7366
|| ||||| | | ||| | | ||||| | ||| ||| || | ||||| || ||
Sbjct 7927363 ATCTCAATACTAGCTTGGGTGCTGGAAGAAAGGATTCTCTTAGCTCATTCACATGCAGTA 7927422
Query 7367 CGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAAC 7426
| | | || | || | | ||| | || || |||||||| || | |||||
Sbjct 7927423 TGAAGTTGGCGGACAGCTCTCTTGTTCTCATTGATGTCCTTCTTATGCTTGTGCTTAAAT 7927482
Query 7427 TCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCC 7486
|| || || || | | || |||||||| ||||| ||||| | ||
Sbjct 7927483 TCGGCAATAAAATGG----------TTG--TCAAAATCTTCTCCACCTAAGTGGATGTCT 7927530
Query 7487 CCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAAC 7546
|| || | | ||| ||||||||||| || ||||||| | | || ||||||||
Sbjct 7927531 CCAGCTTTAGATTTCACTTCAAAGATTCCATCTTCAATAATGAGATTTGACACATCAAAA 7927590
Query 7547 GTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGA 7606
| ||| | || | |||||| || | || | || | | || || || |
Sbjct 7927591 TTGTCACTCCTGAG-TAAAAAATCAGCATATTTCTTTCAGCACCAACCTTTTTGTCTAAG 7927649
Query 7607 CCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGC 7665
| || || ||||| || || |||| || ||| ||||| | ||| ||| || || |||||
Sbjct 7927650 CAATAGGCAATAGCAGCAGCTGTTGCTT-ATTGATAATTCTAAGTACA-TTAAGACCAGC 7927707
Query 7666 AATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGT 7725
||||||| | |||||| | || || || | || ||||| |||||||| || || || ||
Sbjct 7927708 AATAGTTCCAGCATCTGTGGTTGCCTGATGCTGAGAATCATTAAAGTAAGCTGGCACAGT 7927767
Query 7726 TACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGT 7785
|| || || | || || | || || ||||| ||| | ||| || |||| || ||
Sbjct 7927768 AACCACAGCATTGGTAACAGTGTTCCCAAGATAAATTTCTGTGATTTCCTTCACCTTTGT 7927827
Query 7786 AAGAACCA 7793
|| ||||
Sbjct 7927828 CAGCACCA 7927835
>seq3133
Length=50759066
Score = 93.3 bits (102), Expect = 5e-14
Identities = 192/282 (68%), Gaps = 14/282 (5%)
Strand=Plus/Plus
Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609
||||||| |||||||| | || | |||| | || | || | || ||| || ||
Sbjct 19048767 CCACCACATAGGTCAAATACCAGGATGTTCTTCTCTCCCTCCCT---CTCATCCAGGCCA 19048823
Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669
|| ||||| || || || || || ||||| || || | | | ||| | |||| |
Sbjct 19048824 TAAGCGATGGCAGCTGCTGTCGGCTCATTGATGATCCTCATAACGTTGCGTTTAGCACTT 19048883
Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTAC- 7728
||| | |||||||| || ||||| ||| ||||||||||| || || || |
Sbjct 19048884 GTTCCAGCATCTTTGGTTGCTTGC--------ATCATTAAAGTAGGCAGGTACAGTAAAA 19048935
Query 7729 GACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAG 7788
||| || | || || ||||| || | ||||| ||| | | ||||||||||| || ||
Sbjct 19048936 GACTGCATGAGTAACCTTCTTTCCCAAATACGCCTCCACACTTTCTTTCATTTTAGTGAG 19048995
Query 7789 AACCATCGATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTT 7829
|||||| | ||||| ||||| | ||||| ||| || ||||
Sbjct 19048996 AACCATGGCAGAAATTTCTTCTGGAGCAAA-TGTCTTGGTTT 19049036
>seq3134
Length=59225736
Score = 84.2 bits (92), Expect = 3e-11
Identities = 279/427 (65%), Gaps = 8/427 (2%)
Strand=Plus/Minus
Query 6943 AGTTTCGAGT-CCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATT 7001
|||||| ||| |||||||| ||||| || || ||||| || | || ||||||||| ||
Sbjct 50880704 AGTTTC-AGTACCAAGAGAAAGAGGAGTGACATCCAAAAGCAGCAAATCTTGAACATTTT 50880646
Query 7002 CGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCAT 7061
| | || || | || ||||| || || || | | || || | || ||||| |
Sbjct 50880645 CAGACTTATCTCCAGATAGAATGGCAGCCTGAACAGCTGAACCATAAGTAACAGCCTCCT 50880586
Query 7062 CGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAA 7121
| ||||| || | |||||||||||||| || || ||| | || || | | || |
Sbjct 50880585 CAGGGTTGATGCTCTTATTCAGTTCTTTTCCATTGAAAAAGTCTTGTAGGAGCTTGTGGA 50880526
Query 7122 TTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCA-CTTTCGATTTATCG 7180
| || ||||| | | || ||||| || || | |||| | || || | || ||
Sbjct 50880525 TCTTGGGGATATGAATAGAGCCACCCACTTGGACATTGTCATGGATCTGTC-ACTTGTCA 50880467
Query 7181 ATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATA 7240
| || | ||| |||| | || || |||| |||| | || ||| | ||||| |
Sbjct 50880466 AGTTTGGCATCTTGAAGAGCCTTCTCCTCAGGGTCCAGAGTGCCACAGAATAGGTCCACA 50880407
Query 7241 CACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAAC 7300
||| || ||||| | |||| |||||||| | ||| |||| || || || |
Sbjct 50880406 TTCAGCTCTTCAAACTGAGCACAAGTAATGGAGACACAGATGTCAATTCCTTCATAGAGG 50880347
Query 7301 GAATCAATTTCAATGGTTGTTTG--TGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCAC 7358
|||||||| ||| | | | ||| ||| | ||||| || ||| ||| || | ||||
Sbjct 50880346 GAATCAATCTCAGTCCTGGCTTGGATGC--TGGAAGAGAAGATTCTCTTAGCTTGTTCAC 50880289
Query 7359 ACGCCGT 7365
| || ||
Sbjct 50880288 ATGCAGT 50880282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635107839280960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |