Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cavia_20porcellus_20[refseq_20GCF_5F000151735.1_202008-03-03]
3,144 sequences; 2,723,219,641 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq3106 86.0 8e-12
seq3018 86.0 8e-12
>seq3106
Length=22756556
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 102546 AATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTCTTCGAAAAG 102605
||||||||||||||||||||||| ||| || || ||||||||||||||||| || |||
Sbjct 217478 AATCCATTTGACTTCATGGAGAATATTTCTCTAGAAGGGAAGACAAACTTCTTTGAGAAG 217537
Query 102606 AGGGTTGGGGACTAT 102620
||||| || || |||
Sbjct 217538 AGGGTAGGCGAGTAT 217552
>seq3018
Length=3443724
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 102546 AATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTCTTCGAAAAG 102605
||||||||||||||||||||||| ||| || || ||||||||||||||||| || |||
Sbjct 3375934 AATCCATTTGACTTCATGGAGAATATTTCTCTGGAAGGGAAGACAAACTTCTTTGAGAAG 3375875
Query 102606 AGGGTTGGGGACTAT 102620
||||| || || |||
Sbjct 3375874 AGGGTAGGCGAGTAT 3375860
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620718004823680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |