Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cavia_20porcellus_20[refseq_20GCF_5F000151735.1_202008-03-03] 3,144 sequences; 2,723,219,641 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq3108 149 4e-30 seq3114 136 3e-26 seq3133 129 4e-24 seq3129 129 4e-24 seq3124 109 4e-18 seq3143 95.1 8e-14 seq3099 93.3 3e-13 seq3063 91.5 1e-12 seq3134 89.7 3e-12 seq3061 87.8 1e-11 seq2997 87.8 1e-11 seq3116 86.0 4e-11 seq3105 86.0 4e-11 >seq3108 Length=23989115 Score = 149 bits (164), Expect = 4e-30 Identities = 375/559 (67%), Gaps = 16/559 (3%) Strand=Plus/Minus Query 474324 GAATTGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAAT- 474382 ||| ||| |||||| |||| | || || || | | ||||| | ||| | | || Sbjct 13305115 GAACTGCTGTTGGTACTGATCTTGGCACCACCTTCTCCTGTGTGGATGTCTTCTAGCATT 13305056 Query 474383 GGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCT 474442 || ||||| || || ||||| ||||| || | ||| || || ||| || || ||| Sbjct 13305055 GGAAAAGTGGAGATCATTGC-AATGATCAGGAAAATCAAATCACTCCAAGTTACGTCTCT 13304997 Query 474443 TTTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCT 474502 | | | | || ||| || ||| ||||||||| ||| |||||| ||| || || Sbjct 13304996 GTAATTAACACCGAAGGACTGATTCAAGATGCTGCAAAAAATCAAGTGGCAATAAAACCA 13304937 Query 474503 GTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTC 474562 | || || |||| |||| || ||| ||| ||| ||| ||||| | | |||| Sbjct 13304936 GCCAACACAGTTTTCAATGCCAAGCATCTGACTGGATGTAGATTTCATGATGCTATTGTC 13304877 Query 474563 CAATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATAT- 474621 || ||||||||| |||||||| || | |||| | |||| | || ||| | | Sbjct 13304876 CAGTCTGATATGAAGCATTGGCCCTTCATGGTGGTGAATGAGGCAGGC---CCAAAGTTC 13304820 Query 474622 -AGAAGCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGG 474680 || || |||||| ||| || || || || | || | || | || || |||| Sbjct 13304819 CAGTAG-AATACAA--AGGAGAGACAAAGAGCTTCTGTCCAAAGAAAGTATCATCTATGG 13304763 Query 474681 TTTTAGCCAAAATGAAACAAACCGCG--AGCTCATATCTTGGACAAGAA-GTAACTGATG 474737 | | | || ||||| ||| || |||| |||||||| |||| || || ||| Sbjct 13304762 TGCTGACAAAGATGAAGGAAATTGCAGAAGCT--TATCTTGGG-AAGACTGTTACCAATG 13304706 Query 474738 CAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGG 474797 | || | |||| ||||| || |||||||| ||||| |||| ||||| |||| ||| | Sbjct 13304705 CTGTGGTCACTGAGCCAGCTTACTTTAATGACTCTCAGTGTCAGGCAACCAAAGTTGCTG 13304646 Query 474798 GAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTG 474857 ||| ||||| ||||||||||| || | ||||| ||||| |||||||| || || ||| Sbjct 13304645 GAAACATTGCTGGTCTTAATGTATTTAGAATTATCAATGAGCCAACAGCTGCTGCTGTTG 13304586 Query 474858 CTTATGGTCTTGATAAGAA 474876 | ||||| || || || || Sbjct 13304585 CCTATGGCCTAGACAAAAA 13304567 >seq3114 Length=26790417 Score = 136 bits (150), Expect = 3e-26 Identities = 353/532 (66%), Gaps = 11/532 (2%) Strand=Plus/Minus Query 474333 TTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAG 474392 |||| | |||| | || || || ||| ||||| | ||| | || |||| ||||| | Sbjct 7928174 TTGGCACTGATCTTGGCACCACCTACTCCTGTGTGGGTGTCTTCCAGCATGGAAAAGTGG 7928115 Query 474393 AAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAA 474452 | || ||||||||||| || | ||| ||| || ||| ||||| ||| ||||| | Sbjct 7928114 AGATCATTGCCAATGATCATAGAAATTGAATCACCCCAAGTTATGTCGTTTTCACTGACA 7928055 Query 474453 CTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTA 474512 | || | | |||||| ||||| ||| ||||| ||| || || | ||||| Sbjct 7928054 CCAAA----TGACTGGAGACGCTGCAAAAAATCAAATAGCAATGAACCCCATCAATACAG 7927999 Query 474513 TTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATA 474572 |||||||||| || ||||||| ||| ||||||||| | |||||| ||||||| Sbjct 7927998 TTTTTGATGCCAAGTATCTGATTGGATGTAGATTTGATGATGCTGTTGTCCAGTCTGATA 7927939 Query 474573 TGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAATAC 474632 || | | |||| || | |||| | || || || | || | | ||| | | Sbjct 7927938 TGAAGCGTCGGCCCTTCATGGTGGTGAACAATGCAGGCAGGCCCAAGGTTCAAGTAGAAT 7927879 Query 474633 ACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTC-TTCAATGGTTTTAGCCAAA 474691 || ||| || || | || | || || | | || || |||| | | || Sbjct 7927878 ACAAAGGAGAGACGAGC---TTCTATCCAGAGGAGGTGTCATTTTTTGGTGCTGACAAAG 7927822 Query 474692 ATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGT 474750 |||| ||| | | || | |||||||| | || || |||| || ||||||| Sbjct 7927821 GTGAAGGAAATCACAGAAATT-TATCTTGGGAACACTGTTACCAATGCTGTGGTTACTGT 7927763 Query 474751 TCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGG 474810 ||||| || |||||||||||||| | ||| ||||| | |||||| |||| ||||| || Sbjct 7927762 GCCAGCTTACTTTAATGATTCTCAGCATCAGGCAACCACAGATGCTGGAACTATTGCTGG 7927703 Query 474811 TCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTAT 474862 ||||||||| | | ||||| ||| || ||||||| || || |||| ||| Sbjct 7927702 TCTTAATGTACTTAGAATTATCAAT-AAGCAACAGCTGCTGCTATTGCCTAT 7927652 >seq3133 Length=50759066 Score = 129 bits (142), Expect = 4e-24 Identities = 319/478 (67%), Gaps = 12/478 (3%) Strand=Plus/Minus Query 475698 ATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCAT 475757 |||| ||||||||||| || || || || ||||||| || || || || || | Sbjct 19048389 ATGAGATTGTTCTTGTTGGTGGCTCCACTCGAATTCCCAAGATCCAGCAACTGGTTAAAG 19048330 Query 475758 CATATTTTAATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATG 475817 | || ||||| || || | || | |||| || ||||| ||||| || |||| Sbjct 19048329 AGTTCTTCAATGGCAAGGAGCCATCTGGTGGCATAAACCCAGATGAGGCTGTAGCCTATG 19048270 Query 475818 GAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTG 475877 | ||||||||||| | || | | | || || | ||| ||| || | | | | Sbjct 19048269 GTGCTGCTGTCCAGGTAGGTGTACTCTCCAGTGA-TCA----AGATACAGGAGACC-TGG 19048216 Query 475878 TACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTA 475937 |||| || | ||| || || || | || ||||||| || ||||| | ||||| | Sbjct 19048215 TACTGCTTAATGTACGTCT--TTACACTTGGCATTGAAACTGTGGGAGGTGTCATGACCA 19048158 Query 475938 ATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATT 475997 | || ||| ||||| ||| |||| ||| || || || | |||||||| || Sbjct 19048157 AACTGATTCCAAGAAACACTGTAGTCCCTACCAAGAAGTCTCAAATCTTTTCCACAGCTT 19048098 Query 475998 CTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTC--ACTAA 476055 ||||||||||| ||||| | || ||| || ||| ||||| | ||| || || || || Sbjct 19048097 CTGATAATCAACCAACTATTACAATCAAAGTCTATGAAGAT--AAGCAACCTCTGACAAA 19048040 Query 476056 AGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGT 476115 ||| || || || || | ||| | ||| || ||||||||||||||| || || Sbjct 19048039 AGACAACCACCTCCTGGGTATGTTTGACCTTACTGGAATTCCTCCTGCTCCCCATGGGGT 19047980 Query 476116 TCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCT 476173 | || || ||||| |||||||| | |||| ||||| |||||| |||| || ||| Sbjct 19047979 CTCCCAGATAGAAGTCACTTTTGAGACAGATGTGAATGGCATTCTTCATGTGACAGCT 19047922 >seq3129 Length=43247874 Score = 129 bits (142), Expect = 4e-24 Identities = 366/561 (65%), Gaps = 40/561 (7%) Strand=Plus/Plus Query 474381 ATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTT 474440 |||| ||||| || |||||||||||||| || || ||| ||| || ||| ||||| Sbjct 28182738 ATGGAAAAGTGGAGATAATTGCCAATGATCAGGGAAATCAAACCACTCCAAGTTATGTCG 28182797 Query 474441 CTTTTACTGAA--------------ACTG---AACATCTTATTGGAGATGCTGCTAAATA 474483 |||| ||| || |||| |||| || || |||||||||| ||| | Sbjct 28182798 CTTTCACTAAAGATTGATCAGAGATACTGCAAAACAACTCATCAGAGATGCTGCAAAAAA 28182857 Query 474484 TCAAGCTGCATCTAATCCTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTA- 474542 ||||| ||| || || || || ||||||||| ||| ||||||| |||| Sbjct 28182858 TCAAGTGGCAGTGAACCCCACCAACACAGCTTTTGATGCCAAACATCTGATTGGACGTAG 28182917 Query 474543 --ATTTTGATGATACCACTGTCCAATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAA 474600 || ||||||| | | |||||| |||| | || |||||||| |||| |||| | || Sbjct 28182918 ATATGATGATGATGCTATTGTCCAGTCTGGTGTGAAGCATTGGCCCTTTATGGTGGTGAA 28182977 Query 474601 TGTTGGTGGTAAACCATATATAGAAGCAATACACGCAGGTGAAACTAAACAATTTTCACC 474660 || || || | || | | ||| | | || || |||| | ||| || Sbjct 28182978 TGATGCAGGCAGGCCCAAGGTTCAAGTAGAATACAGAGA-GAAAG------AGTTTGTCC 28183030 Query 474661 GGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGG 474720 || | | ||||| | || | | || |||| |||| || | | |||||||| Sbjct 28183031 AGAGAAGGTGTCTTCTACAGTGCTGACAAAGGTGAAGGAAACTGCAGACGCGTATCTTGG 28183090 Query 474721 ACAAGAA-GTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTC 474779 |||| || || |||| || |||||| ||||| || |||||||| ||||| |||| Sbjct 28183091 G-AAGACTGTTACCAATGCTGTGGTTACTGGGCCAGCTTACTTTAATGACTCTCAGCGTC 28183149 Query 474780 AAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAAC 474839 | | ||| |||||||| |||| ||||| ||||||||||| | | ||||| |||| Sbjct 28183150 AGG-AACCAAAGATGCTGGAACCATTGCTGGTCTTAATGTACTTGGAATTATCAATG--- 28183205 Query 474840 CAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAATTCTGACAAAGAAGTAAATGTTT 474899 ||| || |||||||||| | || || || || ||| |||||| Sbjct 28183206 -------AGCTGCTATTGCTTATGGCTTAGACAAAAAGGTTGGAGTTGAAAGAAATGTAC 28183258 Query 474900 TAATCTTTGATTGTGGAGGTA 474920 | || ||||||| ||||||| Sbjct 28183259 TGATTTTTGATTTAGGAGGTA 28183279 >seq3124 Length=37078832 Score = 109 bits (120), Expect = 4e-18 Identities = 102/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || ||||||| ||||| ||||||||||| ||||| || || || || ||||||| Sbjct 25401453 ATGCTGTGGTTACTGTGCCAGCTTATTTTAATGACTCTCAGCGCCAGGCTACCAAAGATG 25401512 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || | ||||| ||||||||||| | | ||||| ||||| |||||||| || || Sbjct 25401513 CTGGGACCATTGCTGGTCTTAATGTACTTAGAATTATCAATGAGCCAACAGCTGCTGCTA 25401572 Query 474855 TTGCTTATGG 474864 |||| ||||| Sbjct 25401573 TTGCCTATGG 25401582 Score = 93.3 bits (102), Expect = 3e-13 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 474333 TTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAG 474392 |||| |||||| | || || || ||| ||||| | ||| | || |||| || || | Sbjct 25400711 TTGGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTCTTCCAGCATGGAAAGGTGG 25400770 Query 474393 AAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAA 474452 | || ||||||||||| || || ||| |||| || ||| ||||| |||| ||||| | Sbjct 25400771 AGATCATTGCCAATGATCAGGGAAATCGAACCACTCCAAGTTATGTCGCTTTCACTGACA 25400830 Query 474453 CTGAACATCTTATTGGAGATGCTGCTAAATATCAAG 474488 | |||| || ||||| |||||||| ||| | |||| Sbjct 25400831 CCGAACGACTGATTGGGGATGCTGCAAAAAACCAAG 25400866 Score = 89.7 bits (98), Expect = 3e-12 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 290842 AGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACCTGCAATTTTTGCCGAATC 290901 ||| |||||||| ||||| |||||||| | ||||| |||||| ||||| | | | ||| Sbjct 25401568 AGCAGCTGTTGGCTCATTGATAATTCTAAGTACATTAAGACCAGCAATGGTCCCAGCATC 25401509 Query 290902 TAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGACTGTAATAACAGCTTT 290958 | || |||||||| || | |||||||||||||| || || |||| ||||| || Sbjct 25401508 TTTGGTAGCCTGGCGCTGAGAGTCATTAAAATAAGCTGGCACAGTAACCACAGCATT 25401452 Score = 89.7 bits (98), Expect = 3e-12 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 476051 ACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGA 476110 || || || || ||| ||||| | ||| | || ||| || |||||||| ||| | Sbjct 25402872 ACCAAGGACAACAACCTGCTTGGCAAGTTTGAACTGACAGGCATACCTCCTGCACCCCGT 25402931 Query 476111 GGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACT 476170 || |||||||| ||||| || ||||||||||||||||| |||||||| || ||||| || Sbjct 25402932 GGTGTTCCTCAGATTGAGGTCACTTTTGATATTGATGCCAATGGTATCCTCAATGTCTCT 25402991 Query 476171 GC 476172 || Sbjct 25402992 GC 25402993 >seq3143 Length=88675666 Score = 95.1 bits (104), Expect = 8e-14 Identities = 92/117 (79%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 ||||| ||||| ||||| ||||| | ||| | ||| ||||| |||||||| | || ||| Sbjct 45737991 ACTGTACCAGCTTATTT-AATGACTTTCAGCATCAGGCAACCAAAGATGCTGAAACCATT 45737933 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTAT 474862 || ||||||| ||| | | ||||| |||||||||||||| || || |||||||| Sbjct 45737932 GCTGGTCTTATTGTACTCAGAATTATCAATGAACCAACAGCTGCTGCTATTGCTTAT 45737876 >seq3099 Length=15920349 Score = 93.3 bits (102), Expect = 3e-13 Identities = 271/407 (67%), Gaps = 13/407 (3%) Strand=Plus/Plus Query 474464 ATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTATTTTTGATGCT 474523 |||||||||| | | ||| |||||| ||| || || || || |||||||||| Sbjct 2306389 ATTGGAGATGTTACAAAAAATCAAGTGGCAATGAACCCCACCAACACAGTTTTTGATGCC 2306448 Query 474524 AAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATGCGTCATTGG 474583 || | | ||||| ||| ||| |||| | |||||| ||||||||| || ||| Sbjct 2306449 AAGTGTCTTATTGGATGTAGGTTTAGTGATGCTGTTGTCCAGTCTGATATGAAGCACTGG 2306508 Query 474584 CCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATAT--AGAAGCAATACACGCAGGTG 474641 || || | | || ||||| || | | | | | || || |||||| || | Sbjct 2306509 CCCTTCATGATGGCAAATGATGCAGCTGGCCTAGGGCTCAAGTAG-AATACAA--AGAAG 2306565 Query 474642 AAACTAAACAATTT-TCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAA 474700 | || ||| ||| | | || || | | || || ||||| | | || ||||| || Sbjct 2306566 AGAC-AAAGAATGTCTTTCCAGAGGACGTATCATCTATGGTGCTGACAAAGATGAAGGAA 2306624 Query 474701 ACCGCG--AGCTCATATCTTGGACAAGAA-GTAACTGATGCAGTAATTACTGTTCCAGCA 474757 || | |||| |||||||| |||| || | ||| ||| ||||||| ||||| Sbjct 2306625 ACTGAAGAAGCT--TATCTTGGG-AAGACTGTTATCATTGCTGTAGTTACTGTGCCAGCT 2306681 Query 474758 TATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAAT 474817 || |||||||| ||| | ||| ||||| ||| |||| | | ||||| ||||||||| Sbjct 2306682 TACTTTAATGACCGTCATCATCAGGCAACCAAAAATGCTGCAGCCATTGCTGGTCTTAAT 2306741 Query 474818 GTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 || | | ||||| ||||| ||||||| || || |||| ||||| Sbjct 2306742 GTACTTAGAATTATCAATGAGCCAACAGATGCTGCTATTGCCTATGG 2306788 >seq3063 Length=7952490 Score = 91.5 bits (100), Expect = 1e-12 Identities = 110/148 (74%), Gaps = 4/148 (3%) Strand=Plus/Minus Query 480564 ACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTT 480621 |||||||| || || ||| |||| || || ||||||| | ||| | ||||| Sbjct 5877711 ACAAGATGGAGAGTGGACTCCCTTTG--AATGTTGTAATCAGACAAAGTGCATCCATCTT 5877654 Query 480622 CAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTT 480681 | |||||||| ||| |||| || || | ||| ||||||||||||||||||||||| |||| Sbjct 5877653 CCAGTTGCTTACCAACAAAGATCAGCCTTTGCTGATCAGGAGGAATTCCTTCCTTATCTT 5877594 Query 480682 GAATCTTTTGTTTGACAGCTTCAATAGT 480709 | ||||| || ||| ||| ||||| Sbjct 5877593 GGATCTTGGCCTTTACATTTTCTATAGT 5877566 >seq3134 Length=59225736 Score = 89.7 bits (98), Expect = 3e-12 Identities = 174/256 (68%), Gaps = 2/256 (1%) Strand=Plus/Plus Query 474333 TTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAG 474392 |||| |||||| | || ||| | ||| |||||| | ||| | || | | ||||| | Sbjct 50879536 TTGGCATTGATCTTGGCACTGCCTACTCTTGTGTGGGTGTCTTCCAGCACTGAAAAGTGG 50879595 Query 474393 AAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAA 474452 | ||||| ||||||| || || ||| |||| | ||| ||| | |||| | | | Sbjct 50879596 AGATAAT--CCAATGATCAGGGAAATTGAACTATTCCAAGTTATACTGCTTTCGCCAACA 50879653 Query 474453 CTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTA 474512 || |||| || |||||||||||||| ||| |||||| || | || || || || Sbjct 50879654 CTAAACAACTGATTGGAGATGCTGCAAAAAATCAAGTGACAACGAACCCAACCAACACAG 50879713 Query 474513 TTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATA 474572 |||| |||| || | ||||| ||| ||| ||||| | ||| || ||||||| Sbjct 50879714 TTTTCAATGCCAAGCATCTTATTGGATGTAGCTTTTATGATGCTGTTGTTCAGTCTGATA 50879773 Query 474573 TGCGTCATTGGCCTTT 474588 || |||||||| || Sbjct 50879774 TGAAGCATTGGCCCTT 50879789 Score = 87.8 bits (96), Expect = 1e-11 Identities = 189/280 (68%), Gaps = 7/280 (3%) Strand=Plus/Minus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| |||| |||||| || || || ||| ||||| | || | | || | || Sbjct 42150599 TGCAGTTGGCATTGATCGTGGCACCACCTACTTCTGTGTGGGCGTCTTCTATCATAGAAA 42150540 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| || ||||| ||| ||||| || ||| || | || ||| |||| | |||| || Sbjct 42150539 AGTGGAGATAATCACCAGTGACCCGGGAAATCGAGCCACTCCAAGTTATGCTGCTTTCAC 42150480 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 ||| ||| |||| | || ||||||||||| | | |||||| ||| || || | Sbjct 42150479 TGACACTCAACAATTGATCGGAGATGCTGCAAGACATCAAGTGGCAAGGAACCCCACCA- 42150421 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTG--TCCAA 474565 | ||||||| ||| || |||||| | || | |||||| ||||| |||| Sbjct 42150420 -GCAATTTTTGGTGCCAAGCATCAGATTGGACATAGATATGATGA---CACTGTTTCCAG 42150365 Query 474566 TCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTG 474605 ||||||||| |||||||| || | |||| | |||| || Sbjct 42150364 TCTGATATGAAGCATTGGCCCTTCACGGTGGTGAATGATG 42150325 >seq3061 Length=7642621 Score = 87.8 bits (96), Expect = 1e-11 Identities = 149/215 (69%), Gaps = 17/215 (8%) Strand=Plus/Minus Query 480561 AGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCT 480620 || ||||||||||| || | || || || || ||||||| | ||| | |||| Sbjct 2174629 AGCACAAGATGAAGAGTGGTCTCCTTTTGAATGTTGTAATCAGACAAAGTGCATCCATCT 2174570 Query 480621 TCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCT 480680 || |||| | ||||||| || || | ||||||||||||||||||||||||||| || Sbjct 2174569 TCCAGTTAC----CAGCAAAGATCAGCCTTTGTTGATCAGGAGGAATTCCTTCCTTATCC 2174514 Query 480681 TGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCA------AGGGTA 480734 || ||||| || ||| ||| | |||||| ||||| |||| ||||| Sbjct 2174513 TGGATCTTGGCCTTTACATTTTCTA------CAGTGTCTGAAGGTTCAGCCTTGAGGGTG 2174460 Query 480735 ATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || || || || | |||||| || Sbjct 2174459 ATGGTCTTTCCTGTAAGGGT-TTTATGAAAATCTG 2174426 >seq2997 Length=2481227 Score = 87.8 bits (96), Expect = 1e-11 Identities = 98/127 (77%), Gaps = 3/127 (2%) Strand=Plus/Minus Query 480564 ACAAGATGAAGTGT-ACTTTCTTTAGAAACATTATAATCAGCTAGAGTTC-TGTTATCTT 480621 ||||||||||| || | | |||| ||| || ||| ||| | ||| | | ||||| Sbjct 411694 ACAAGATGAAGAGTGAACTCCTTTTGAATG-TTGTAACCAGACAAAGTACATCCAATCTT 411636 Query 480622 CAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTT 480681 | |||||||| |||||||| || || | ||| ||||||||||||||||||||||| || | Sbjct 411635 CCAGTTGCTTACCAGCAAAGATCAGCCCTTGCTGATCAGGAGGAATTCCTTCCTTATCCT 411576 Query 480682 GAATCTT 480688 | ||||| Sbjct 411575 GGATCTT 411569 >seq3116 Length=27942054 Score = 86.0 bits (94), Expect = 4e-11 Identities = 116/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 475877 GTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACT 475936 ||||| |||| ||| ||| ||| || | || ||||||| || ||||| | ||||| Sbjct 8944352 GTACTGCTTGATGTATGTCCCCTTACACTTGGCATTGAAACTGTGGGAGGTGTCATGACC 8944411 Query 475937 AATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTAT 475996 || || ||| ||||| ||| |||| ||| || || | | |||||||| | Sbjct 8944412 AAACTGATTCCAAGAAACACTGTAGTCCCTACCAAGAAGTCTCAGATCTTTTCCACAGCT 8944471 Query 475997 TCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGT 476038 |||||||||||| ||||||| || ||| || ||| ||||||| Sbjct 8944472 TCTGATAATCAACCAACTGTTACAATCAAAGTCTATGAAGGT 8944513 >seq3105 Length=21505965 Score = 86.0 bits (94), Expect = 4e-11 Identities = 144/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 480564 ACAAGATGA--AGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTT 480621 ||||||||| |||| || | |||| | || || ||||||| | ||| | ||||| Sbjct 7417354 ACAAGATGAAGAGTGGAC-TCCTTTTG-AATGTTGTAATCAGACAAAGTACGTCCATCTT 7417411 Query 480622 CAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTT 480681 | ||||| | ||||||| || || | ||| ||||||||||||||||||||||| || | Sbjct 7417412 CCAGTTGTGTAGCAGCAAAGATCAGCCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCT 7417471 Query 480682 GAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTT 480741 | ||||| || ||| ||| ||||| || | || ||| || || | || || | Sbjct 7417472 GGATCTTGGCCTTTACATTTTCTATAGTGTCCAGGGGTTCAGTCTCGTGGATGATGGTCT 7417531 Query 480742 TACCGGTGAGAGTCTTAACGAAAAT 480766 | || || | || || || ||||| Sbjct 7417532 TCCCTGTAAAGGTTTTTACAAAAAT 7417556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268044338585312