Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cavia_20porcellus_20[refseq_20GCF_5F000151735.1_202008-03-03] 3,144 sequences; 2,723,219,641 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq3105 170 2e-36 seq3141 152 6e-31 seq3106 150 2e-30 seq3035 149 8e-30 seq3137 134 2e-25 seq3140 111 2e-18 seq3062 95.1 1e-13 seq3018 89.7 6e-12 >seq3105 Length=21505965 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| |||||||| ||||||||||| |||| || Sbjct 20450443 GCTTGGCCAGCTCCCCGGGCAGCAGCAGCCGCACGGCAGTCTGGATCTCCCGCGACGTGA 20450502 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || |||||| | ||||||| |||| | Sbjct 20450503 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGA 20450562 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 20450563 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAAGAGATGCCCGTGTCGGGGT 20450622 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 20450623 GCACCTGCTTGAGCACCTTGTA 20450644 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| |||||||| ||||||||||| |||| || Sbjct 20495720 GCTTGGCCAGCTCCCCGGGCAGCAGCAGCCGCACGGCAGTCTGGATCTCCCGCGACGTGA 20495661 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || |||||| | ||||||| |||| | Sbjct 20495660 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGA 20495601 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 20495600 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 20495541 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 20495540 GCACCTGCTTGAGCACCTTGTA 20495519 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| |||||||| ||||||||||| |||| || Sbjct 20516602 GCTTGGCCAGCTCCCCGGGCAGCAGCAGCCGCACGGCAGTCTGGATCTCCCGCGACGTGA 20516661 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || |||||| | ||||||| |||| | Sbjct 20516662 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGA 20516721 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 20516722 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 20516781 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 20516782 GCACCTGCTTGAGCACCTTGTA 20516803 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| |||||||| ||||||||||| |||| || Sbjct 20509054 GCTTGGCCAGCTCCCCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGACGTGA 20508995 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| |||||||||| || |||||| | ||||||| || | | Sbjct 20508994 TGGTGGATCGCTTGTTGTAGTGCGCCAGGCGTGACGCCTCGCCGGCGATGCGCTCAAAAA 20508935 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 20508934 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 20508875 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 20508874 GCACCTGCTTGAGCACCTTGTA 20508853 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| |||||||| ||||||||||| |||| || Sbjct 20572337 GCTTGGCCAGCTCCCCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGACGTGA 20572278 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || |||||| | | || || |||| | Sbjct 20572277 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCGGCAATACGCTCGAAGA 20572218 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 20572217 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 20572158 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 20572157 GCACCTGCTTGAGCACCTTGTA 20572136 Score = 143 bits (158), Expect = 3e-28 Identities = 153/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || ||| | ||| || ||||| ||||||||||| |||| || Sbjct 20553706 GCTTGGCTAGCTCTCCTGGCAGCAGCAGTCGGACGGCCGTCTGGATCTCCCGCGACGTGA 20553647 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||| ||||| |||||||||| || |||||| | ||||||| |||| | Sbjct 20553646 TGGTGGAGCGTTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCGGCGATGCGTTCGAAGA 20553587 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||| | ||| | |||| ||||||||| |||||| | Sbjct 20553586 TGTCGTTGACGAAAGAGTTCATAATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGAT 20553527 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 20553526 GCACCTGCTTGAGCACCTTGTA 20553505 Score = 140 bits (154), Expect = 4e-27 Identities = 152/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| | ||| || ||||||||||| |||| || Sbjct 20382250 GCTTGGCCAGCTCCCCGGGCAGCAACAGCCTCACAGCAGTCTGGATCTCCCGCGACGTGA 20382309 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || |||||| ||||||| |||| | Sbjct 20382310 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGATGCCTCGCCTGCGATGCGCTCGAAGA 20382369 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| || ||||| ||| |||| Sbjct 20382370 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAAATGCCTGTGTCTGGGT 20382429 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 ||||||| |||||||||||||| Sbjct 20382430 GCACCTGTTTGAGCACCTTGTA 20382451 Score = 91.5 bits (100), Expect = 2e-12 Identities = 148/209 (71%), Gaps = 8/209 (4%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| ||||| || ||||||||||| || || || Sbjct 19952424 GCTTGGCCAGCTCCCCGGGCAGCAGCAGCCGCACAGCCGTCTGGATCTCCCG--TGATGA 19952367 Query 1254403 TCGTGTTG--CGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGC--GGTCG 1254458 |||| |||||||| |||| ||||| || |||||| |||| | | || Sbjct 19952366 AATGGTTGAACGCTTGTTGTAGTGTGCCAGGCGTGATGCCTCGCA--CGATACCCGTTCA 19952309 Query 1254459 ATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCG 1254518 | ||||| |||||| || |||| || ||| | ||| |||||||||| ||| Sbjct 19952308 AATATGTCAGAGACAAAGGAATTCAAGATGCTCATAGCCTTTGAGGAGATGCCCGTGTCT 19952249 Query 1254519 GGGTGCACCTGCTTGAGCACCTTGTAGAT 1254547 || || |||||||| |||||||||||||| Sbjct 19952248 GGATGAACCTGCTTTAGCACCTTGTAGAT 19952220 >seq3141 Length=78381119 Score = 152 bits (168), Expect = 6e-31 Identities = 155/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| ||||| ||| | |||||||||||| |||||||||||||| | || Sbjct 10969094 GCTTGGCCAGCTCGCCCGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGACGTGA 10969153 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| ||||| || |||||| ||||||| |||| | Sbjct 10969154 TGGTCGAGCGCTTGTTGTAGTGTGCCAGGCGCGACGCCTCGCCAGCGATGCGCTCGAAGA 10969213 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| |||||||| Sbjct 10969214 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 10969273 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 10969274 GCACCTGCTTCAGCACCTTGTA 10969295 Score = 149 bits (164), Expect = 8e-30 Identities = 154/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| ||||| ||| | |||||||||||| |||||||||||||| | || Sbjct 10937234 GCTTGGCCAGCTCGCCCGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGACGTGA 10937175 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| ||||| || |||||| ||||||| |||| | Sbjct 10937174 TGGTCGAGCGCTTGTTGTAGTGTGCCAGGCGAGACGCCTCGCCAGCGATGCGCTCGAAGA 10937115 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||| || |||||| ||| ||| | |||| ||||||||| |||||||| Sbjct 10937114 TGTCATTGACGAAGGAGTTCGTGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 10937055 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 10937054 GCACCTGCTTCAGCACCTTGTA 10937033 Score = 149 bits (164), Expect = 8e-30 Identities = 154/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| ||||| ||| | |||||||||||| |||||||||||||| | || Sbjct 10948483 GCTTGGCCAGCTCGCCCGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGACGTGA 10948542 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| ||||| || |||||| ||||||| |||| | Sbjct 10948543 TGGTCGAGCGCTTGTTGTAGTGTGCCAGGCGAGACGCCTCGCCAGCGATGCGCTCGAAGA 10948602 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||| || |||||| ||| ||| | |||| ||||||||| |||||||| Sbjct 10948603 TGTCATTGACGAAGGAGTTCGTGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 10948662 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 10948663 GCACCTGCTTCAGCACCTTGTA 10948684 Score = 140 bits (154), Expect = 4e-27 Identities = 152/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| ||||| ||| | |||||||||||| ||||||||||| || | || Sbjct 10917460 GCTTGGCCAGCTCGCCTGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCACGGGACGTGA 10917519 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| ||||| || |||||| ||||||| |||| | Sbjct 10917520 TGGTTGAGCGCTTGTTGTAGTGTGCCAGGCGCGACGCCTCGCCAGCGATGCGCTCGAAGA 10917579 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| ||| |||| Sbjct 10917580 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 10917639 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 10917640 GGACCTGCTTCAGCACCTTGTA 10917661 >seq3106 Length=22756556 Score = 150 bits (166), Expect = 2e-30 Identities = 220/311 (71%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 || || ||||| || |||||||||||||||||||| || | |||||| | ||| Sbjct 216966 GAATGAATGTTTTCCATGGCGATCTGGAAGCCGTAGAAACAGCGAGCCTCTGTGATTTGA 216907 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || | ||||||| | ||| ||||| || ||||| ||||||||||| || Sbjct 216906 ACTTCTTGGCTGAACCGCTCCACCAAATTCTCATTGACTATGCCATCGCTGGCGGCAAAG 216847 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812 |||||||| ||||| ||||||| | ||| ||| | || | ||||||| Sbjct 216846 AAAGCCAGAACGTGTGATATAAAGTATCTCTCCTCGGGCTTCAGGGCTTCCCAGTGCTGA 216787 Query 869813 GTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTAC 869872 |||| | || ||||||||||| || ||||| | ||||||||||| || || ||| Sbjct 216786 ATGTCTTTGGAAAGATCCACCTCCTCTGCCGTCCAAAAGGAGGCCTCGGCTTTCTTATAC 216727 Query 869873 ATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCGCGC 869932 |||| ||| | | ||||| ||||||||||| ||||||||| |||||| || | | Sbjct 216726 ATCTGCCAAATGTCATGGTATTCGATAGGGAAGATGACAAAGCGCCGGGGGTTCTCTCTC 216667 Query 869933 AACAGGGGTTC 869943 | ||| ||||| Sbjct 216666 AGCAGTGGTTC 216656 Score = 96.9 bits (106), Expect = 4e-14 Identities = 182/264 (69%), Gaps = 14/264 (5%) Strand=Plus/Minus Query 869192 CTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAG 869251 ||||| | ||| ||| ||||| ||||||||||||||| || || ||||| ||||| ||| Sbjct 217233 CTGATGAGTTCATTGGAAAAGGTGAGGCCGGGCATGAGTCCCCGTTTCTTCAGCCAGAAG 217174 Query 869252 ATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCG 869310 || | |||| ||| || || ||||||||||| || ||||| |||||| | | | || Sbjct 217173 ATCGACGCA-AAAGAACCAGAAAAAAAGATGCCTTCCACGGCAGCAAAGGCTACCACGCG 217115 Query 869311 CTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGCCCAGTCGGCCTT 869367 || || | || | |||| |||| ||||| || |||||||| | | Sbjct 217114 TTCCCCATAAGT------GGCCTCTTTGTCCCCAATCCAGCGCAAGGCCCAGTCCGAC-- 217063 Query 869368 TTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCGGCCGGGTC 869427 ||| |||| | |||| || |||||||| |||||| ||| |||| | || Sbjct 217062 -TTCTTCACACAGGGCATGGTCTCGATGGCATTGAAGAGGAACTCCCTTTCTCTGGAATC 217004 Query 869428 CTTGACATAGGTGTCGATCAGGAG 869451 |||| ||| || ||||| ||||| Sbjct 217003 TTTGATATAAGTATCGATGAGGAG 216980 >seq3035 Length=4563218 Score = 149 bits (164), Expect = 8e-30 Identities = 154/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| |||||||| ||||||||||| || | || Sbjct 1658310 GCTTGGCCAGCTCCCCGGGCAGCAGCAGACGCACGGCCGTCTGGATCTCCCGAGACGTGA 1658369 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| ||||||| |||| | Sbjct 1658370 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGAAGCCTCGCCCGCGATGCGCTCGAAGA 1658429 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| |||||||||||||||| ||| | |||| ||||||||| ||| |||| Sbjct 1658430 TGTCGTTCACAAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCCGGGT 1658489 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||| ||||| ||||||||||| Sbjct 1658490 GCACTTGCTTCAGCACCTTGTA 1658511 Score = 143 bits (158), Expect = 3e-28 Identities = 153/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| |||||||| ||||||||||| || | || Sbjct 1623916 GCTTGGCCAGCTCCCCGGGCAGCAGCAGACGCACGGCCGTCTGGATCTCCCGAGACGTGA 1623975 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| ||||||| |||| | Sbjct 1623976 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGAAGCCTCGCCCGCGATGCGCTCGAAGA 1624035 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || ||||||||||||| ||| | |||| ||||||||| ||| |||| Sbjct 1624036 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCCGGGT 1624095 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||| ||||| ||||||||||| Sbjct 1624096 GCACTTGCTTCAGCACCTTGTA 1624117 Score = 143 bits (158), Expect = 3e-28 Identities = 153/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| |||||||| ||||||||||| || | || Sbjct 1645402 GCTTGGCCAGCTCCCCGGGCAGCAGCAGACGCACGGCCGTCTGGATCTCCCGAGACGTGA 1645343 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| ||||||| |||| | Sbjct 1645342 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGAAGCCTCGCCCGCGATGCGCTCGAAGA 1645283 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || ||||||||||||| ||| | |||| ||||||||| ||| |||| Sbjct 1645282 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCCGGGT 1645223 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||| ||||| ||||||||||| Sbjct 1645222 GCACTTGCTTCAGCACCTTGTA 1645201 Score = 140 bits (154), Expect = 4e-27 Identities = 161/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| |||||||| ||||||||||| || | || Sbjct 1915094 GCTTGGCCAGCTCCCCGGGCAGCAGCAGACGCACGGCCGTCTGGATCTCCCGAGATGTGA 1915035 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| |||||||||| || ||||| ||||||| |||| | Sbjct 1915034 TGGTCGAACGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCACCCGCGATGCGCTCGAAAA 1914975 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || ||||||||||||| ||| | |||| ||||||||| ||| |||| Sbjct 1914974 TGTCGTTCACGAACGAGTTCATGATACCCATAGCCTTGGACGAGATGCCCGTGTCCGGGT 1914915 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||| ||||| ||||||||||| | | || |||||| Sbjct 1914914 GCACTTGCTTCAGCACCTTGTACACGTACACCGAGTA 1914878 Score = 134 bits (148), Expect = 2e-25 Identities = 151/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | | ||| |||||||| ||||||||||| || | || Sbjct 1665757 GCTTGGCCAGCTCCCCGGGGAGCAGCAGACGCACGGCCGTCTGGATCTCCCGAGACGTGA 1665698 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| ||||||| |||| | Sbjct 1665697 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGAAGCCTCGCCCGCGATGCGCTCGAAGA 1665638 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || ||||||||||||| ||| | |||| ||||||||| ||| |||| Sbjct 1665637 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCCGGGT 1665578 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||| || || ||||||||||| Sbjct 1665577 GCACTTGTTTCAGCACCTTGTA 1665556 >seq3137 Length=61187194 Score = 134 bits (148), Expect = 2e-25 Identities = 151/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||| | | ||| | || ||| Sbjct 599437 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCGGCACCTCTCCCGACACGA 599496 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||| | |||||||||| || |||||| || ||||| | |||| | Sbjct 599497 TGGTCAAGCGCTTGCTGTAGTGCGCCAGGCGCGACGCCTCGATGGCGATGTGCTCGAAGA 599556 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| | |||||||||| ||| | |||| || ||||| |||||||| Sbjct 599557 TGTCGTTGACGATGGAGTTCATGATGCCCATGGCCTTGGAAGACATGCCTGTGTCGGGGT 599616 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 599617 GCACCTGCTTCAGCACCTTGTA 599638 Score = 120 bits (132), Expect = 4e-21 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 1254368 CAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGC 1254427 |||||||||||| || | | ||| | || ||| || ||||||| | ||||||| Sbjct 587531 CAGGCGCACGGCCGTGGGCACCTCTCCCGACAGGATGGTCAAGCGCTTGCTGTAGTGCGC 587472 Query 1254428 CAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGAC 1254487 ||| || |||||| || ||||||| |||| ||||| ||||| || |||||||||| Sbjct 587471 CAGGCGCGAAGCCTCGATGGCGATGCGCTCGAAGATGTCATTGACGAAGGAGTTCATGAT 587412 Query 1254488 CGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGA 1254546 ||| | |||| || ||||| |||||||||||||||||| ||||||||||||| Sbjct 587411 GCCCATGGCCTTGGAAGACATGCCTGTGTCGGGGTGCACCTGCTTCAGCACCTTGTAGA 587353 >seq3140 Length=75551126 Score = 111 bits (122), Expect = 2e-18 Identities = 103/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 ||||| ||||| | || || || || |||||||| |||||||| | |||| ||| || Sbjct 46046861 ACCCTTTTTGAACTTATTCTGGCAGCAAACTACCTAGACATCAAAGGTTTGCTTGATGTT 46046920 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 |||||| |||| ||||| ||||||||||| || | || |||||||| ||||||||| Sbjct 46046921 ACATGCAAGACTGTTGCCAATATGATCAAGGGGAAAACTCCTGAGGAGATTCGCAAGACC 46046980 Query 1592285 TTTAACATCAA 1592295 ||||| ||||| Sbjct 46046981 TTTAATATCAA 46046991 >seq3062 Length=7649460 Score = 95.1 bits (104), Expect = 1e-13 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || |||||||| |||||||| | |||| ||| || |||||| |||| ||||| Sbjct 3152431 GCAGCAAACTACCTAGACATCAAAGGTTTGCTTGATGTTACATGCAAGACTGTTGCCAAT 3152372 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAA 1592295 ||||||||||| || | || |||||||| |||||||| ||||| ||||| Sbjct 3152371 ATGATCAAGGGGAAAACTCCTGAGGAGATTCGCAAGACTTTTAATATCAA 3152322 >seq3018 Length=3443724 Score = 89.7 bits (98), Expect = 6e-12 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 869830 CACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCATACTTGCTG 869889 ||||||||| || ||||| | ||||||||||| || || ||||||| ||| | | || Sbjct 3379085 CACCTCCTCTGCCGTCCAAAAGGAGGCCTCGGCTTTCTTATACATCTGCCAAATGTCATG 3379144 Query 869890 GTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCGCGCAACAGGGGTTC 869943 ||| ||||||||||| ||||||||| |||||| || | || ||| ||||| Sbjct 3379145 GTATTCGATAGGGAAGATGACAAAGCGCCGGGGGTTCTCTCTCAGCAGTGGTTC 3379198 Score = 86.0 bits (94), Expect = 8e-11 Identities = 86/109 (79%), Gaps = 2/109 (2%) Strand=Plus/Plus Query 869192 CTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAG 869251 ||||| | ||| ||| ||||| ||||||||||||||| || || ||||| ||||| ||| Sbjct 3376791 CTGATGAGTTCATTGGAAAAGGTGAGGCCGGGCATGAGTCCCCGTTTCTTCAGCCAGAAG 3376850 Query 869252 AT-GGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 || | |||| ||| || || ||||||||||| || || || |||||| Sbjct 3376851 ATCGACGCA-AAAGAACCAGAAAAAAAGATGCCTTCCACAGCAGCAAAG 3376898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106881188636648