Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cavia_20porcellus_20[refseq_20GCF_5F000151735.1_202008-03-03] 3,144 sequences; 2,723,219,641 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3105 228 1e-53 seq3141 206 4e-47 seq3035 197 2e-44 seq3137 165 1e-34 seq3106 138 2e-26 seq3140 87.8 3e-11 seq3018 87.8 3e-11 >seq3105 Length=21505965 Score = 228 bits (252), Expect = 1e-53 Identities = 204/256 (80%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 20450404 TGTACTTGGTGACGGCCTTGGTGCCCTCCGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 20450463 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| |||||||| ||||||||||| || | ||| ||| ||||||||| | Sbjct 20450464 GCAGCAGCCGCACGGCAGTCTGGATCTCCCGCGACGTGATGGTGGAGCGCTTGTTGTAGT 20450523 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| | ||||||| |||| ||||||||||| || ||||||| Sbjct 20450524 GCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 20450583 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| ||||||||||||||||||||||||||||| Sbjct 20450584 TGATGCCCATGGCCTTGGAAGAGATGCCCGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 20450643 Query 1485710 AAACAAAGGACGAGTA 1485725 |||| || |||||| Sbjct 20450644 AAACGTAGACCGAGTA 20450659 Score = 219 bits (242), Expect = 7e-51 Identities = 202/256 (79%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 20495759 TGTACTTGGTGACAGCCTTGGTGCCCTCCGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 20495700 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| |||||||| ||||||||||| || | ||| ||| ||||||||| | Sbjct 20495699 GCAGCAGCCGCACGGCAGTCTGGATCTCCCGCGACGTGATGGTGGAGCGCTTGTTGTAGT 20495640 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| | ||||||| |||| ||||||||||| || ||||||| Sbjct 20495639 GCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 20495580 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| ||||||||||||||||||||||||||||| Sbjct 20495579 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 20495520 Query 1485710 AAACAAAGGACGAGTA 1485725 | || || |||||| Sbjct 20495519 ACACGTAGACCGAGTA 20495504 Score = 219 bits (242), Expect = 7e-51 Identities = 202/256 (79%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 20516563 TGTACTTGGTGACAGCCTTGGTGCCCTCCGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 20516622 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| |||||||| ||||||||||| || | ||| ||| ||||||||| | Sbjct 20516623 GCAGCAGCCGCACGGCAGTCTGGATCTCCCGCGACGTGATGGTGGAGCGCTTGTTGTAGT 20516682 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| | ||||||| |||| ||||||||||| || ||||||| Sbjct 20516683 GCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 20516742 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| ||||||||||||||||||||||||||||| Sbjct 20516743 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 20516802 Query 1485710 AAACAAAGGACGAGTA 1485725 | || || |||||| Sbjct 20516803 ACACGTAGACCGAGTA 20516818 Score = 210 bits (232), Expect = 3e-48 Identities = 200/256 (78%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 20509093 TGTACTTGGTGACAGCCTTGGTGCCCTCCGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 20509034 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| |||||||| ||||||||||| || | ||| ||| |||||||| | Sbjct 20509033 GCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGACGTGATGGTGGATCGCTTGTTGTAGT 20508974 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| | ||||||| || | ||||||||||| || ||||||| Sbjct 20508973 GCGCCAGGCGTGACGCCTCGCCGGCGATGCGCTCAAAAATGTCGTTGACGAAGGAGTTCA 20508914 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| ||||||||||||||||||||||||||||| Sbjct 20508913 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 20508854 Query 1485710 AAACAAAGGACGAGTA 1485725 | || || |||||| Sbjct 20508853 ACACGTAGACCGAGTA 20508838 Score = 205 bits (226), Expect = 1e-46 Identities = 199/256 (78%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| |||||||| |||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 20572376 TGTATTTGGTGACAGCCTTGGTGCCCTCCGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 20572317 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| |||||||| ||||||||||| || | ||| ||| ||||||||| | Sbjct 20572316 GCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGACGTGATGGTGGAGCGCTTGTTGTAGT 20572257 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| | | || || |||| ||||||||||| || ||||||| Sbjct 20572256 GCGCCAGGCGCGACGCCTCGCCGGCAATACGCTCGAAGATGTCGTTGACGAAGGAGTTCA 20572197 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| ||||||||||||||||||||||||||||| Sbjct 20572196 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 20572137 Query 1485710 AAACAAAGGACGAGTA 1485725 | || || |||||| Sbjct 20572136 ACACGTAGACCGAGTA 20572121 Score = 192 bits (212), Expect = 9e-43 Identities = 196/256 (77%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| |||||||| || || ||| |||| || || || ||| Sbjct 20553745 TGTACTTGGTGACGGCCTTGGTGCCCTCTGACACAGCATGCTTGGCTAGCTCTCCTGGCA 20553686 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| || ||||| ||||||||||| || | ||| ||| ||| ||||| | Sbjct 20553685 GCAGCAGTCGGACGGCCGTCTGGATCTCCCGCGACGTGATGGTGGAGCGTTTGTTGTAGT 20553626 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| | ||||||| |||| ||||||||||| || ||||||| Sbjct 20553625 GCGCCAGGCGCGACGCCTCGCCGGCGATGCGTTCGAAGATGTCGTTGACGAAAGAGTTCA 20553566 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 | || ||| | ||| ||||||||| |||||| |||||||||||||||||||||| Sbjct 20553565 TAATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGATGCACCTGCTTGAGCACCTTGT 20553506 Query 1485710 AAACAAAGGACGAGTA 1485725 | || || |||||| Sbjct 20553505 ACACGTAGACCGAGTA 20553490 Score = 185 bits (204), Expect = 1e-40 Identities = 188/245 (77%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| ||||||||||||||||| ||||| ||||| |||||| ||||||| || ||| ||| Sbjct 20382211 TGTATTTGGTGACGGCCTTGGTGCCCTCGGAGACAGCGTGCTTGGCCAGCTCCCCGGGCA 20382270 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| | ||| || ||||||||||| || | ||| ||| ||||||||| | Sbjct 20382271 GCAACAGCCTCACAGCAGTCTGGATCTCCCGCGACGTGATGGTGGAGCGCTTGTTGTAGT 20382330 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| ||||||||||| || ||||||| Sbjct 20382331 GCGCCAGGCGCGATGCCTCGCCTGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 20382390 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| || ||||| ||| ||||||||||| ||||||||||||| Sbjct 20382391 TGATGCCCATGGCCTTGGACGAAATGCCTGTGTCTGGGTGCACCTGTTTGAGCACCTTGT 20382450 Query 1485710 AAACA 1485714 | ||| Sbjct 20382451 ACACA 20382455 Score = 129 bits (142), Expect = 9e-24 Identities = 178/245 (73%), Gaps = 8/245 (3%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || || |||||| ||||||| || ||| ||| Sbjct 19952463 TGTACTTGGTGACAGCCTTGGTGCCCTCGGACACAGCGTGCTTGGCCAGCTCCCCGGGCA 19952404 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTG--CGCTTGTTAGT 1485587 | ||| ||||| || ||||||||||| | ||| || |||| |||||||| Sbjct 19952403 GCAGCAGCCGCACAGCCGTCTGGATCTCCC--GTGATGAAATGGTTGAACGCTTGTTGTA 19952346 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGAT--GCGGTCGATCATGTCGTTGACAAACGAG 1485645 | | |||||||| |||||| |||| || || | ||||| |||||| || Sbjct 19952345 GTGTGCCAGGCGTGATGCCTCG--CACGATACCCGTTCAAATATGTCAGAGACAAAGGAA 19952288 Query 1485646 TTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACC 1485705 |||| ||| ||| | || |||||||||| ||| || || |||||||| |||||| Sbjct 19952287 TTCAAGATGCTCATAGCCTTTGAGGAGATGCCCGTGTCTGGATGAACCTGCTTTAGCACC 19952228 Query 1485706 TTGTA 1485710 ||||| Sbjct 19952227 TTGTA 19952223 >seq3141 Length=78381119 Score = 206 bits (228), Expect = 4e-47 Identities = 192/244 (79%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || ||||||||| ||||||| ||||| ||| Sbjct 10969055 TGTACTTGGTGACCGCCTTGGTGCCCTCCGACACGGCGTGCTTGGCCAGCTCGCCCGGCA 10969114 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| |||||||||||||||| ||| || ||||||||| | Sbjct 10969115 GCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 10969174 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||||||| |||||| ||||||| |||| ||||||||||| || ||||||| Sbjct 10969175 GTGCCAGGCGCGACGCCTCGCCAGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 10969234 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| |||||||||||||||||| |||||||||| Sbjct 10969235 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 10969294 Query 1485710 AAAC 1485713 | || Sbjct 10969295 ACAC 10969298 Score = 205 bits (226), Expect = 1e-46 Identities = 199/256 (78%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || ||||||||| ||||||| ||||| ||| Sbjct 10937273 TGTACTTGGTGACCGCCTTGGTGCCCTCCGACACGGCGTGCTTGGCCAGCTCGCCCGGCA 10937214 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| |||||||||||||||| ||| || ||||||||| | Sbjct 10937213 GCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 10937154 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||||||| |||||| ||||||| |||| ||||| ||||| || |||||| Sbjct 10937153 GTGCCAGGCGAGACGCCTCGCCAGCGATGCGCTCGAAGATGTCATTGACGAAGGAGTTCG 10937094 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 10937093 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 10937034 Query 1485710 AAACAAAGGACGAGTA 1485725 | ||| || ||||| Sbjct 10937033 ACACATAGATGGAGTA 10937018 Score = 205 bits (226), Expect = 1e-46 Identities = 199/256 (78%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || ||||||||| ||||||| ||||| ||| Sbjct 10948444 TGTACTTGGTGACCGCCTTGGTGCCCTCCGACACGGCGTGCTTGGCCAGCTCGCCCGGCA 10948503 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| |||||||||||||||| ||| || ||||||||| | Sbjct 10948504 GCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 10948563 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||||||| |||||| ||||||| |||| ||||| ||||| || |||||| Sbjct 10948564 GTGCCAGGCGAGACGCCTCGCCAGCGATGCGCTCGAAGATGTCATTGACGAAGGAGTTCG 10948623 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 10948624 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 10948683 Query 1485710 AAACAAAGGACGAGTA 1485725 | ||| || ||||| Sbjct 10948684 ACACATAGATGGAGTA 10948699 Score = 187 bits (206), Expect = 4e-41 Identities = 187/243 (77%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 ||||| ||||| |||||||| |||||||| ||||| ||| ||||||| ||||| ||| Sbjct 10917423 TACTTCGTGACCGCCTTGGTGCCCTCTGACACGGCATGCTTGGCCAGCTCGCCTGGCAGC 10917482 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591 | |||||||||||| ||||||||||| |||| ||| || ||||||||| | | Sbjct 10917483 AGCAGGCGCACGGCCGTCTGGATCTCACGGGACGTGATGGTTGAGCGCTTGTTGTAGTGT 10917542 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 |||||||| |||||| ||||||| |||| ||||||||||| || ||||||||| Sbjct 10917543 GCCAGGCGCGACGCCTCGCCAGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCATG 10917602 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAA 1485711 || ||| | ||| |||||||| ||| ||||| |||||||| ||||||||||| Sbjct 10917603 ATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGACCTGCTTCAGCACCTTGTAC 10917662 Query 1485712 ACA 1485714 ||| Sbjct 10917663 ACA 10917665 >seq3035 Length=4563218 Score = 197 bits (218), Expect = 2e-44 Identities = 190/244 (78%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || || |||||| ||||||| || ||| ||| Sbjct 1658271 TGTACTTGGTGACGGCCTTGGTGCCCTCCGACACCGCGTGCTTGGCCAGCTCCCCGGGCA 1658330 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| |||||||| ||||||||||| || | ||| || ||||||||| | Sbjct 1658331 GCAGCAGACGCACGGCCGTCTGGATCTCCCGAGACGTGATGGTCGAGCGCTTGTTGTAGT 1658390 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| |||||||| ||||||||||||| Sbjct 1658391 GCGCCAGGCGCGAAGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACAAACGAGTTCA 1658450 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| ||| |||||||| ||||| |||||||||| Sbjct 1658451 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCCGGGTGCACTTGCTTCAGCACCTTGT 1658510 Query 1485710 AAAC 1485713 | || Sbjct 1658511 ACAC 1658514 Score = 192 bits (212), Expect = 9e-43 Identities = 189/244 (77%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || || |||||| ||||||| || ||| ||| Sbjct 1623877 TGTACTTGGTGACGGCCTTGGTGCCCTCCGACACCGCGTGCTTGGCCAGCTCCCCGGGCA 1623936 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| |||||||| ||||||||||| || | ||| || ||||||||| | Sbjct 1623937 GCAGCAGACGCACGGCCGTCTGGATCTCCCGAGACGTGATGGTCGAGCGCTTGTTGTAGT 1623996 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| |||||||| || |||||||||| Sbjct 1623997 GCGCCAGGCGCGAAGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTTCA 1624056 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| ||| |||||||| ||||| |||||||||| Sbjct 1624057 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCCGGGTGCACTTGCTTCAGCACCTTGT 1624116 Query 1485710 AAAC 1485713 | || Sbjct 1624117 ACAC 1624120 Score = 188 bits (208), Expect = 1e-41 Identities = 188/244 (77%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || || |||||| ||||||| || ||| ||| Sbjct 1645441 TGTACTTGGTGACCGCCTTGGTGCCCTCCGACACCGCGTGCTTGGCCAGCTCCCCGGGCA 1645382 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| |||||||| ||||||||||| || | ||| || ||||||||| | Sbjct 1645381 GCAGCAGACGCACGGCCGTCTGGATCTCCCGAGACGTGATGGTCGAGCGCTTGTTGTAGT 1645322 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| |||||||| || |||||||||| Sbjct 1645321 GCGCCAGGCGCGAAGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTTCA 1645262 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| ||| |||||||| ||||| |||||||||| Sbjct 1645261 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCCGGGTGCACTTGCTTCAGCACCTTGT 1645202 Query 1485710 AAAC 1485713 | || Sbjct 1645201 ACAC 1645198 Score = 183 bits (202), Expect = 5e-40 Identities = 194/256 (76%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || || |||||| ||||||| || ||| | | Sbjct 1665796 TGTACTTGGTGACCGCCTTGGTGCCCTCCGACACCGCGTGCTTGGCCAGCTCCCCGGGGA 1665737 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| |||||||| ||||||||||| || | ||| || ||||||||| | Sbjct 1665736 GCAGCAGACGCACGGCCGTCTGGATCTCCCGAGACGTGATGGTCGAGCGCTTGTTGTAGT 1665677 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| |||||||| || |||||||||| Sbjct 1665676 GCGCCAGGCGCGAAGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTTCA 1665617 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| ||| |||||||| || || |||||||||| Sbjct 1665616 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCCGGGTGCACTTGTTTCAGCACCTTGT 1665557 Query 1485710 AAACAAAGGACGAGTA 1485725 | ||| | |||||| Sbjct 1665556 ACACATACACCGAGTA 1665541 Score = 174 bits (192), Expect = 2e-37 Identities = 185/244 (76%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| || || || || |||||| ||||||| || ||| ||| Sbjct 1915133 TGTACTTGGTGACAGCCTTGGTGCCTTCCGACACCGCGTGCTTGGCCAGCTCCCCGGGCA 1915074 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| |||||||| ||||||||||| || | ||| || |||||||| | Sbjct 1915073 GCAGCAGACGCACGGCCGTCTGGATCTCCCGAGATGTGATGGTCGAACGCTTGTTGTAGT 1915014 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| ||||| ||||||| |||| |||||||| || |||||||||| Sbjct 1915013 GCGCCAGGCGCGACGCCTCACCCGCGATGCGCTCGAAAATGTCGTTCACGAACGAGTTCA 1914954 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| ||| |||||||| ||||| |||||||||| Sbjct 1914953 TGATACCCATAGCCTTGGACGAGATGCCCGTGTCCGGGTGCACTTGCTTCAGCACCTTGT 1914894 Query 1485710 AAAC 1485713 | || Sbjct 1914893 ACAC 1914890 >seq3137 Length=61187194 Score = 165 bits (182), Expect = 1e-34 Identities = 184/246 (75%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 1485468 GTTGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCG 1485527 ||||| || ||||||||| |||| ||| | || ||||||||| ||||||| || ||| | Sbjct 599396 GTTGTGCTGGGTGACGGCTTTGGGGCCCGCAGACACGGCGTGCTTGGCCAGCTCCCCGGG 599455 Query 1485528 CATGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGT 1485587 || | |||||||||||| ||| | | ||| | | |||| || ||||||| | Sbjct 599456 CAGCAGCAGGCGCACGGCCGTCGGCACCTCTCCCGACACGATGGTCAAGCGCTTGCTGTA 599515 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | |||||||||| |||||| || ||||| | |||| ||||||||||| | ||||| Sbjct 599516 GTGCGCCAGGCGCGACGCCTCGATGGCGATGTGCTCGAAGATGTCGTTGACGATGGAGTT 599575 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||| | ||| || ||||| |||||||||||||||||| |||||||| Sbjct 599576 CATGATGCCCATGGCCTTGGAAGACATGCCTGTGTCGGGGTGCACCTGCTTCAGCACCTT 599635 Query 1485708 GTAAAC 1485713 ||| || Sbjct 599636 GTACAC 599641 Score = 111 bits (122), Expect = 2e-18 Identities = 135/184 (73%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 1485534 CAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGC 1485593 |||||||||||| || | | ||| | | ||| || ||||||| | | |||| Sbjct 587531 CAGGCGCACGGCCGTGGGCACCTCTCCCGACAGGATGGTCAAGCGCTTGCTGTAGTGCGC 587472 Query 1485594 CAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGAT 1485653 |||||| |||||| || ||||||| |||| ||||| ||||| || ||||||||||| Sbjct 587471 CAGGCGCGAAGCCTCGATGGCGATGCGCTCGAAGATGTCATTGACGAAGGAGTTCATGAT 587412 Query 1485654 CGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAAC 1485713 ||| | ||| || ||||| |||||||||||||||||| ||||||||||| || Sbjct 587411 GCCCATGGCCTTGGAAGACATGCCTGTGTCGGGGTGCACCTGCTTCAGCACCTTGTAGAC 587352 Query 1485714 AAAG 1485717 | || Sbjct 587351 ATAG 587348 >seq3106 Length=22756556 Score = 138 bits (152), Expect = 2e-26 Identities = 224/319 (70%), Gaps = 14/319 (4%) Strand=Plus/Minus Query 794353 CTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAG 794412 ||||| | ||| ||| |||| ||||||||||||||| || || ||||| ||||| ||| Sbjct 217233 CTGATGAGTTCATTGGAAAAGGTGAGGCCGGGCATGAGTCCCCGTTTCTTCAGCCAGAAG 217174 Query 794413 ATGG-CACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCG 794471 || | | || ||| || || ||||||||||| || ||||| |||||| | || | || Sbjct 217173 ATCGACGCA-AAAGAACCAGAAAAAAAGATGCCTTCCACGGCAGCAAAGGCTACCACGCG 217115 Query 794472 CTCGGCAAAAGTGTCCAGGCCCTCTTTGT---TGATCCACTTCATCGCCCACTCTGCCTT 794528 || || |||| | ||||||||| ||||| || ||||| || | | Sbjct 217114 TTCCCCATAAGT------GGCCTCTTTGTCCCCAATCCAGCGCAAGGCCCAGTCCGAC-- 217063 Query 794529 TTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTC 794588 ||| |||| |||||| || |||||||| |||||| ||| | || | || Sbjct 217062 -TTCTTCACACAGGGCATGGTCTCGATGGCATTGAAGAGGAACTCCCTTTCTCTGGAATC 217004 Query 794589 CTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGAT 794648 |||| || || ||||||||||| ||| | || || || |||||||| |||||||| Sbjct 217003 TTTGATATAAGTATCGATGAGGAGACTGTACATTTCAGAATGAATGTTTTCCATGGCGAT 216944 Query 794649 CTGGAAGCCATAAAAGCAG 794667 ||||||||| || || ||| Sbjct 216943 CTGGAAGCCGTAGAAACAG 216925 Score = 109 bits (120), Expect = 9e-18 Identities = 189/275 (69%), Gaps = 0/275 (0%) Strand=Plus/Minus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200 ||||| | ||||| | | ||| || || | |||| || | ||| |||||| Sbjct 216930 AAACAGCGAGCCTCTGTGATTTGAACTTCTTGGCTGAACCGCTCCACCAAATTCTCATTG 216871 Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260 || ||||| ||||||||||| || || || || ||||| ||||||| | ||| ||| Sbjct 216870 ACTATGCCATCGCTGGCGGCAAAGAAAGCCAGAACGTGTGATATAAAGTATCTCTCCTCG 216811 Query 796261 TCGCTGAGCGAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAA 796320 | || | ||||||| |||| | || || |||||||| || |||||| Sbjct 216810 GGCTTCAGGGCTTCCCAGTGCTGAATGTCTTTGGAAAGATCCACCTCCTCTGCCGTCCAA 216751 Query 796321 AAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGA 796380 |||||||||||||| || || ||||||| ||| || ||||| ||| ||||| | Sbjct 216750 AAGGAGGCCTCGGCTTTCTTATACATCTGCCAAATGTCATGGTATTCGATAGGGAAGATG 216691 Query 796381 ACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415 |||||||| ||||||||| | ||||| || || Sbjct 216690 ACAAAGCGCCGGGGGTTCTCTCTCAGCAGTGGTTC 216656 >seq3140 Length=75551126 Score = 87.8 bits (96), Expect = 3e-11 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 2035614 GTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCC 2035673 || |||||| ||||| ||||| | || || || || |||||||| |||||||| Sbjct 46046849 GTTGACCAAGGAACCCTTTTTGAACTTATTCTGGCAGCAAACTACCTAGACATCAAAGGT 46046908 Query 2035674 CTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGAC 2035733 | || ||| | |||||||| || ||||| | |||||||| || | || ||||| Sbjct 46046909 TTGCTTGATGTTACATGCAAGACTGTTGCCAATATGATCAAGGGGAAAACTCCTGAGGAG 46046968 Query 2035734 ATCCGCAAGACCTTTAACATCAA 2035756 || |||||||||||||| ||||| Sbjct 46046969 ATTCGCAAGACCTTTAATATCAA 46046991 >seq3018 Length=3443724 Score = 87.8 bits (96), Expect = 3e-11 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 796303 ACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGG 796362 |||||||| || |||||||||||||||||||| || || ||||||| ||| || ||| Sbjct 3379086 ACCTCCTCTGCCGTCCAAAAGGAGGCCTCGGCTTTCTTATACATCTGCCAAATGTCATGG 3379145 Query 796363 TAGCGGATGGGGAACAGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415 || ||| ||||| | |||||||| ||||||||| | ||||| || || Sbjct 3379146 TATTCGATAGGGAAGATGACAAAGCGCCGGGGGTTCTCTCTCAGCAGTGGTTC 3379198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915911958380216