Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cavia_20porcellus_20[refseq_20GCF_5F000151735.1_202008-03-03]
3,144 sequences; 2,723,219,641 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq3105 228 1e-53
seq3141 206 4e-47
seq3035 197 2e-44
seq3137 165 1e-34
seq3106 138 2e-26
seq3140 87.8 3e-11
seq3018 87.8 3e-11
>seq3105
Length=21505965
Score = 228 bits (252), Expect = 1e-53
Identities = 204/256 (80%), Gaps = 0/256 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 20450404 TGTACTTGGTGACGGCCTTGGTGCCCTCCGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 20450463
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| |||||||| ||||||||||| || | ||| ||| ||||||||| |
Sbjct 20450464 GCAGCAGCCGCACGGCAGTCTGGATCTCCCGCGACGTGATGGTGGAGCGCTTGTTGTAGT 20450523
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| | ||||||| |||| ||||||||||| || |||||||
Sbjct 20450524 GCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 20450583
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| |||||||||||||||||||||||||||||
Sbjct 20450584 TGATGCCCATGGCCTTGGAAGAGATGCCCGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 20450643
Query 1485710 AAACAAAGGACGAGTA 1485725
|||| || ||||||
Sbjct 20450644 AAACGTAGACCGAGTA 20450659
Score = 219 bits (242), Expect = 7e-51
Identities = 202/256 (79%), Gaps = 0/256 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 20495759 TGTACTTGGTGACAGCCTTGGTGCCCTCCGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 20495700
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| |||||||| ||||||||||| || | ||| ||| ||||||||| |
Sbjct 20495699 GCAGCAGCCGCACGGCAGTCTGGATCTCCCGCGACGTGATGGTGGAGCGCTTGTTGTAGT 20495640
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| | ||||||| |||| ||||||||||| || |||||||
Sbjct 20495639 GCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 20495580
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| |||||||||||||||||||||||||||||
Sbjct 20495579 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 20495520
Query 1485710 AAACAAAGGACGAGTA 1485725
| || || ||||||
Sbjct 20495519 ACACGTAGACCGAGTA 20495504
Score = 219 bits (242), Expect = 7e-51
Identities = 202/256 (79%), Gaps = 0/256 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 20516563 TGTACTTGGTGACAGCCTTGGTGCCCTCCGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 20516622
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| |||||||| ||||||||||| || | ||| ||| ||||||||| |
Sbjct 20516623 GCAGCAGCCGCACGGCAGTCTGGATCTCCCGCGACGTGATGGTGGAGCGCTTGTTGTAGT 20516682
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| | ||||||| |||| ||||||||||| || |||||||
Sbjct 20516683 GCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 20516742
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| |||||||||||||||||||||||||||||
Sbjct 20516743 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 20516802
Query 1485710 AAACAAAGGACGAGTA 1485725
| || || ||||||
Sbjct 20516803 ACACGTAGACCGAGTA 20516818
Score = 210 bits (232), Expect = 3e-48
Identities = 200/256 (78%), Gaps = 0/256 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 20509093 TGTACTTGGTGACAGCCTTGGTGCCCTCCGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 20509034
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| |||||||| ||||||||||| || | ||| ||| |||||||| |
Sbjct 20509033 GCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGACGTGATGGTGGATCGCTTGTTGTAGT 20508974
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| | ||||||| || | ||||||||||| || |||||||
Sbjct 20508973 GCGCCAGGCGTGACGCCTCGCCGGCGATGCGCTCAAAAATGTCGTTGACGAAGGAGTTCA 20508914
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| |||||||||||||||||||||||||||||
Sbjct 20508913 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 20508854
Query 1485710 AAACAAAGGACGAGTA 1485725
| || || ||||||
Sbjct 20508853 ACACGTAGACCGAGTA 20508838
Score = 205 bits (226), Expect = 1e-46
Identities = 199/256 (78%), Gaps = 0/256 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||| |||||||| |||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 20572376 TGTATTTGGTGACAGCCTTGGTGCCCTCCGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 20572317
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| |||||||| ||||||||||| || | ||| ||| ||||||||| |
Sbjct 20572316 GCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGACGTGATGGTGGAGCGCTTGTTGTAGT 20572257
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| | | || || |||| ||||||||||| || |||||||
Sbjct 20572256 GCGCCAGGCGCGACGCCTCGCCGGCAATACGCTCGAAGATGTCGTTGACGAAGGAGTTCA 20572197
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| |||||||||||||||||||||||||||||
Sbjct 20572196 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 20572137
Query 1485710 AAACAAAGGACGAGTA 1485725
| || || ||||||
Sbjct 20572136 ACACGTAGACCGAGTA 20572121
Score = 192 bits (212), Expect = 9e-43
Identities = 196/256 (77%), Gaps = 0/256 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| |||||||| || || ||| |||| || || || |||
Sbjct 20553745 TGTACTTGGTGACGGCCTTGGTGCCCTCTGACACAGCATGCTTGGCTAGCTCTCCTGGCA 20553686
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| || ||||| ||||||||||| || | ||| ||| ||| ||||| |
Sbjct 20553685 GCAGCAGTCGGACGGCCGTCTGGATCTCCCGCGACGTGATGGTGGAGCGTTTGTTGTAGT 20553626
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| | ||||||| |||| ||||||||||| || |||||||
Sbjct 20553625 GCGCCAGGCGCGACGCCTCGCCGGCGATGCGTTCGAAGATGTCGTTGACGAAAGAGTTCA 20553566
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
| || ||| | ||| ||||||||| |||||| ||||||||||||||||||||||
Sbjct 20553565 TAATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGATGCACCTGCTTGAGCACCTTGT 20553506
Query 1485710 AAACAAAGGACGAGTA 1485725
| || || ||||||
Sbjct 20553505 ACACGTAGACCGAGTA 20553490
Score = 185 bits (204), Expect = 1e-40
Identities = 188/245 (77%), Gaps = 0/245 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||| ||||||||||||||||| ||||| ||||| |||||| ||||||| || ||| |||
Sbjct 20382211 TGTATTTGGTGACGGCCTTGGTGCCCTCGGAGACAGCGTGCTTGGCCAGCTCCCCGGGCA 20382270
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| | ||| || ||||||||||| || | ||| ||| ||||||||| |
Sbjct 20382271 GCAACAGCCTCACAGCAGTCTGGATCTCCCGCGACGTGATGGTGGAGCGCTTGTTGTAGT 20382330
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| ||||||| |||| ||||||||||| || |||||||
Sbjct 20382331 GCGCCAGGCGCGATGCCTCGCCTGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 20382390
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| || ||||| ||| ||||||||||| |||||||||||||
Sbjct 20382391 TGATGCCCATGGCCTTGGACGAAATGCCTGTGTCTGGGTGCACCTGTTTGAGCACCTTGT 20382450
Query 1485710 AAACA 1485714
| |||
Sbjct 20382451 ACACA 20382455
Score = 129 bits (142), Expect = 9e-24
Identities = 178/245 (73%), Gaps = 8/245 (3%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || || |||||| ||||||| || ||| |||
Sbjct 19952463 TGTACTTGGTGACAGCCTTGGTGCCCTCGGACACAGCGTGCTTGGCCAGCTCCCCGGGCA 19952404
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTG--CGCTTGTTAGT 1485587
| ||| ||||| || ||||||||||| | ||| || |||| ||||||||
Sbjct 19952403 GCAGCAGCCGCACAGCCGTCTGGATCTCCC--GTGATGAAATGGTTGAACGCTTGTTGTA 19952346
Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGAT--GCGGTCGATCATGTCGTTGACAAACGAG 1485645
| | |||||||| |||||| |||| || || | ||||| |||||| ||
Sbjct 19952345 GTGTGCCAGGCGTGATGCCTCG--CACGATACCCGTTCAAATATGTCAGAGACAAAGGAA 19952288
Query 1485646 TTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACC 1485705
|||| ||| ||| | || |||||||||| ||| || || |||||||| ||||||
Sbjct 19952287 TTCAAGATGCTCATAGCCTTTGAGGAGATGCCCGTGTCTGGATGAACCTGCTTTAGCACC 19952228
Query 1485706 TTGTA 1485710
|||||
Sbjct 19952227 TTGTA 19952223
>seq3141
Length=78381119
Score = 206 bits (228), Expect = 4e-47
Identities = 192/244 (79%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || ||||||||| ||||||| ||||| |||
Sbjct 10969055 TGTACTTGGTGACCGCCTTGGTGCCCTCCGACACGGCGTGCTTGGCCAGCTCGCCCGGCA 10969114
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| |||||||||||||||| ||| || ||||||||| |
Sbjct 10969115 GCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 10969174
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| |||||||| |||||| ||||||| |||| ||||||||||| || |||||||
Sbjct 10969175 GTGCCAGGCGCGACGCCTCGCCAGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 10969234
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| |||||||| |||||||||||||||||| ||||||||||
Sbjct 10969235 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 10969294
Query 1485710 AAAC 1485713
| ||
Sbjct 10969295 ACAC 10969298
Score = 205 bits (226), Expect = 1e-46
Identities = 199/256 (78%), Gaps = 0/256 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || ||||||||| ||||||| ||||| |||
Sbjct 10937273 TGTACTTGGTGACCGCCTTGGTGCCCTCCGACACGGCGTGCTTGGCCAGCTCGCCCGGCA 10937214
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| |||||||||||||||| ||| || ||||||||| |
Sbjct 10937213 GCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 10937154
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| |||||||| |||||| ||||||| |||| ||||| ||||| || ||||||
Sbjct 10937153 GTGCCAGGCGAGACGCCTCGCCAGCGATGCGCTCGAAGATGTCATTGACGAAGGAGTTCG 10937094
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| |||||||||||||||||| ||||||||||
Sbjct 10937093 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 10937034
Query 1485710 AAACAAAGGACGAGTA 1485725
| ||| || |||||
Sbjct 10937033 ACACATAGATGGAGTA 10937018
Score = 205 bits (226), Expect = 1e-46
Identities = 199/256 (78%), Gaps = 0/256 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || ||||||||| ||||||| ||||| |||
Sbjct 10948444 TGTACTTGGTGACCGCCTTGGTGCCCTCCGACACGGCGTGCTTGGCCAGCTCGCCCGGCA 10948503
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| |||||||||||| |||||||||||||||| ||| || ||||||||| |
Sbjct 10948504 GCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 10948563
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| |||||||| |||||| ||||||| |||| ||||| ||||| || ||||||
Sbjct 10948564 GTGCCAGGCGAGACGCCTCGCCAGCGATGCGCTCGAAGATGTCATTGACGAAGGAGTTCG 10948623
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| |||||||||||||||||| ||||||||||
Sbjct 10948624 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 10948683
Query 1485710 AAACAAAGGACGAGTA 1485725
| ||| || |||||
Sbjct 10948684 ACACATAGATGGAGTA 10948699
Score = 187 bits (206), Expect = 4e-41
Identities = 187/243 (77%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531
||||| ||||| |||||||| |||||||| ||||| ||| ||||||| ||||| |||
Sbjct 10917423 TACTTCGTGACCGCCTTGGTGCCCTCTGACACGGCATGCTTGGCCAGCTCGCCTGGCAGC 10917482
Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591
| |||||||||||| ||||||||||| |||| ||| || ||||||||| | |
Sbjct 10917483 AGCAGGCGCACGGCCGTCTGGATCTCACGGGACGTGATGGTTGAGCGCTTGTTGTAGTGT 10917542
Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651
|||||||| |||||| ||||||| |||| ||||||||||| || |||||||||
Sbjct 10917543 GCCAGGCGCGACGCCTCGCCAGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCATG 10917602
Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAA 1485711
|| ||| | ||| |||||||| ||| ||||| |||||||| |||||||||||
Sbjct 10917603 ATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGACCTGCTTCAGCACCTTGTAC 10917662
Query 1485712 ACA 1485714
|||
Sbjct 10917663 ACA 10917665
>seq3035
Length=4563218
Score = 197 bits (218), Expect = 2e-44
Identities = 190/244 (78%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || || |||||| ||||||| || ||| |||
Sbjct 1658271 TGTACTTGGTGACGGCCTTGGTGCCCTCCGACACCGCGTGCTTGGCCAGCTCCCCGGGCA 1658330
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| |||||||| ||||||||||| || | ||| || ||||||||| |
Sbjct 1658331 GCAGCAGACGCACGGCCGTCTGGATCTCCCGAGACGTGATGGTCGAGCGCTTGTTGTAGT 1658390
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| ||||||| |||| |||||||| |||||||||||||
Sbjct 1658391 GCGCCAGGCGCGAAGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACAAACGAGTTCA 1658450
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| ||| |||||||| ||||| ||||||||||
Sbjct 1658451 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCCGGGTGCACTTGCTTCAGCACCTTGT 1658510
Query 1485710 AAAC 1485713
| ||
Sbjct 1658511 ACAC 1658514
Score = 192 bits (212), Expect = 9e-43
Identities = 189/244 (77%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| || || |||||| ||||||| || ||| |||
Sbjct 1623877 TGTACTTGGTGACGGCCTTGGTGCCCTCCGACACCGCGTGCTTGGCCAGCTCCCCGGGCA 1623936
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| |||||||| ||||||||||| || | ||| || ||||||||| |
Sbjct 1623937 GCAGCAGACGCACGGCCGTCTGGATCTCCCGAGACGTGATGGTCGAGCGCTTGTTGTAGT 1623996
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| ||||||| |||| |||||||| || ||||||||||
Sbjct 1623997 GCGCCAGGCGCGAAGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTTCA 1624056
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| ||| |||||||| ||||| ||||||||||
Sbjct 1624057 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCCGGGTGCACTTGCTTCAGCACCTTGT 1624116
Query 1485710 AAAC 1485713
| ||
Sbjct 1624117 ACAC 1624120
Score = 188 bits (208), Expect = 1e-41
Identities = 188/244 (77%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || || |||||| ||||||| || ||| |||
Sbjct 1645441 TGTACTTGGTGACCGCCTTGGTGCCCTCCGACACCGCGTGCTTGGCCAGCTCCCCGGGCA 1645382
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| |||||||| ||||||||||| || | ||| || ||||||||| |
Sbjct 1645381 GCAGCAGACGCACGGCCGTCTGGATCTCCCGAGACGTGATGGTCGAGCGCTTGTTGTAGT 1645322
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| ||||||| |||| |||||||| || ||||||||||
Sbjct 1645321 GCGCCAGGCGCGAAGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTTCA 1645262
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| ||| |||||||| ||||| ||||||||||
Sbjct 1645261 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCCGGGTGCACTTGCTTCAGCACCTTGT 1645202
Query 1485710 AAAC 1485713
| ||
Sbjct 1645201 ACAC 1645198
Score = 183 bits (202), Expect = 5e-40
Identities = 194/256 (76%), Gaps = 0/256 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || || |||||| ||||||| || ||| | |
Sbjct 1665796 TGTACTTGGTGACCGCCTTGGTGCCCTCCGACACCGCGTGCTTGGCCAGCTCCCCGGGGA 1665737
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| |||||||| ||||||||||| || | ||| || ||||||||| |
Sbjct 1665736 GCAGCAGACGCACGGCCGTCTGGATCTCCCGAGACGTGATGGTCGAGCGCTTGTTGTAGT 1665677
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| ||||||| |||| |||||||| || ||||||||||
Sbjct 1665676 GCGCCAGGCGCGAAGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTTCA 1665617
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| ||| |||||||| || || ||||||||||
Sbjct 1665616 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCCGGGTGCACTTGTTTCAGCACCTTGT 1665557
Query 1485710 AAACAAAGGACGAGTA 1485725
| ||| | ||||||
Sbjct 1665556 ACACATACACCGAGTA 1665541
Score = 174 bits (192), Expect = 2e-37
Identities = 185/244 (76%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| || || || || |||||| ||||||| || ||| |||
Sbjct 1915133 TGTACTTGGTGACAGCCTTGGTGCCTTCCGACACCGCGTGCTTGGCCAGCTCCCCGGGCA 1915074
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| |||||||| ||||||||||| || | ||| || |||||||| |
Sbjct 1915073 GCAGCAGACGCACGGCCGTCTGGATCTCCCGAGATGTGATGGTCGAACGCTTGTTGTAGT 1915014
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| ||||| ||||||| |||| |||||||| || ||||||||||
Sbjct 1915013 GCGCCAGGCGCGACGCCTCACCCGCGATGCGCTCGAAAATGTCGTTCACGAACGAGTTCA 1914954
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| ||| |||||||| ||||| ||||||||||
Sbjct 1914953 TGATACCCATAGCCTTGGACGAGATGCCCGTGTCCGGGTGCACTTGCTTCAGCACCTTGT 1914894
Query 1485710 AAAC 1485713
| ||
Sbjct 1914893 ACAC 1914890
>seq3137
Length=61187194
Score = 165 bits (182), Expect = 1e-34
Identities = 184/246 (75%), Gaps = 0/246 (0%)
Strand=Plus/Plus
Query 1485468 GTTGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCG 1485527
||||| || ||||||||| |||| ||| | || ||||||||| ||||||| || ||| |
Sbjct 599396 GTTGTGCTGGGTGACGGCTTTGGGGCCCGCAGACACGGCGTGCTTGGCCAGCTCCCCGGG 599455
Query 1485528 CATGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGT 1485587
|| | |||||||||||| ||| | | ||| | | |||| || ||||||| |
Sbjct 599456 CAGCAGCAGGCGCACGGCCGTCGGCACCTCTCCCGACACGATGGTCAAGCGCTTGCTGTA 599515
Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647
| |||||||||| |||||| || ||||| | |||| ||||||||||| | |||||
Sbjct 599516 GTGCGCCAGGCGCGACGCCTCGATGGCGATGTGCTCGAAGATGTCGTTGACGATGGAGTT 599575
Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707
|||||| ||| | ||| || ||||| |||||||||||||||||| ||||||||
Sbjct 599576 CATGATGCCCATGGCCTTGGAAGACATGCCTGTGTCGGGGTGCACCTGCTTCAGCACCTT 599635
Query 1485708 GTAAAC 1485713
||| ||
Sbjct 599636 GTACAC 599641
Score = 111 bits (122), Expect = 2e-18
Identities = 135/184 (73%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 1485534 CAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGC 1485593
|||||||||||| || | | ||| | | ||| || ||||||| | | ||||
Sbjct 587531 CAGGCGCACGGCCGTGGGCACCTCTCCCGACAGGATGGTCAAGCGCTTGCTGTAGTGCGC 587472
Query 1485594 CAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGAT 1485653
|||||| |||||| || ||||||| |||| ||||| ||||| || |||||||||||
Sbjct 587471 CAGGCGCGAAGCCTCGATGGCGATGCGCTCGAAGATGTCATTGACGAAGGAGTTCATGAT 587412
Query 1485654 CGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAAC 1485713
||| | ||| || ||||| |||||||||||||||||| ||||||||||| ||
Sbjct 587411 GCCCATGGCCTTGGAAGACATGCCTGTGTCGGGGTGCACCTGCTTCAGCACCTTGTAGAC 587352
Query 1485714 AAAG 1485717
| ||
Sbjct 587351 ATAG 587348
>seq3106
Length=22756556
Score = 138 bits (152), Expect = 2e-26
Identities = 224/319 (70%), Gaps = 14/319 (4%)
Strand=Plus/Minus
Query 794353 CTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAG 794412
||||| | ||| ||| |||| ||||||||||||||| || || ||||| ||||| |||
Sbjct 217233 CTGATGAGTTCATTGGAAAAGGTGAGGCCGGGCATGAGTCCCCGTTTCTTCAGCCAGAAG 217174
Query 794413 ATGG-CACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCG 794471
|| | | || ||| || || ||||||||||| || ||||| |||||| | || | ||
Sbjct 217173 ATCGACGCA-AAAGAACCAGAAAAAAAGATGCCTTCCACGGCAGCAAAGGCTACCACGCG 217115
Query 794472 CTCGGCAAAAGTGTCCAGGCCCTCTTTGT---TGATCCACTTCATCGCCCACTCTGCCTT 794528
|| || |||| | ||||||||| ||||| || ||||| || | |
Sbjct 217114 TTCCCCATAAGT------GGCCTCTTTGTCCCCAATCCAGCGCAAGGCCCAGTCCGAC-- 217063
Query 794529 TTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTC 794588
||| |||| |||||| || |||||||| |||||| ||| | || | ||
Sbjct 217062 -TTCTTCACACAGGGCATGGTCTCGATGGCATTGAAGAGGAACTCCCTTTCTCTGGAATC 217004
Query 794589 CTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGAT 794648
|||| || || ||||||||||| ||| | || || || |||||||| ||||||||
Sbjct 217003 TTTGATATAAGTATCGATGAGGAGACTGTACATTTCAGAATGAATGTTTTCCATGGCGAT 216944
Query 794649 CTGGAAGCCATAAAAGCAG 794667
||||||||| || || |||
Sbjct 216943 CTGGAAGCCGTAGAAACAG 216925
Score = 109 bits (120), Expect = 9e-18
Identities = 189/275 (69%), Gaps = 0/275 (0%)
Strand=Plus/Minus
Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200
||||| | ||||| | | ||| || || | |||| || | ||| ||||||
Sbjct 216930 AAACAGCGAGCCTCTGTGATTTGAACTTCTTGGCTGAACCGCTCCACCAAATTCTCATTG 216871
Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260
|| ||||| ||||||||||| || || || || ||||| ||||||| | ||| |||
Sbjct 216870 ACTATGCCATCGCTGGCGGCAAAGAAAGCCAGAACGTGTGATATAAAGTATCTCTCCTCG 216811
Query 796261 TCGCTGAGCGAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAA 796320
| || | ||||||| |||| | || || |||||||| || ||||||
Sbjct 216810 GGCTTCAGGGCTTCCCAGTGCTGAATGTCTTTGGAAAGATCCACCTCCTCTGCCGTCCAA 216751
Query 796321 AAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGA 796380
|||||||||||||| || || ||||||| ||| || ||||| ||| ||||| |
Sbjct 216750 AAGGAGGCCTCGGCTTTCTTATACATCTGCCAAATGTCATGGTATTCGATAGGGAAGATG 216691
Query 796381 ACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415
|||||||| ||||||||| | ||||| || ||
Sbjct 216690 ACAAAGCGCCGGGGGTTCTCTCTCAGCAGTGGTTC 216656
>seq3140
Length=75551126
Score = 87.8 bits (96), Expect = 3e-11
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 2035614 GTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCC 2035673
|| |||||| ||||| ||||| | || || || || |||||||| ||||||||
Sbjct 46046849 GTTGACCAAGGAACCCTTTTTGAACTTATTCTGGCAGCAAACTACCTAGACATCAAAGGT 46046908
Query 2035674 CTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGAC 2035733
| || ||| | |||||||| || ||||| | |||||||| || | || |||||
Sbjct 46046909 TTGCTTGATGTTACATGCAAGACTGTTGCCAATATGATCAAGGGGAAAACTCCTGAGGAG 46046968
Query 2035734 ATCCGCAAGACCTTTAACATCAA 2035756
|| |||||||||||||| |||||
Sbjct 46046969 ATTCGCAAGACCTTTAATATCAA 46046991
>seq3018
Length=3443724
Score = 87.8 bits (96), Expect = 3e-11
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 796303 ACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGG 796362
|||||||| || |||||||||||||||||||| || || ||||||| ||| || |||
Sbjct 3379086 ACCTCCTCTGCCGTCCAAAAGGAGGCCTCGGCTTTCTTATACATCTGCCAAATGTCATGG 3379145
Query 796363 TAGCGGATGGGGAACAGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415
|| ||| ||||| | |||||||| ||||||||| | ||||| || ||
Sbjct 3379146 TATTCGATAGGGAAGATGACAAAGCGCCGGGGGTTCTCTCTCAGCAGTGGTTC 3379198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915911958380216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |