Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cavia_20porcellus_20[refseq_20GCF_5F000151735.1_202008-03-03] 3,144 sequences; 2,723,219,641 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq3108 156 3e-32 seq3124 147 2e-29 seq3129 129 4e-24 seq3134 122 7e-22 seq3114 111 1e-18 seq3099 109 4e-18 seq3143 98.7 7e-15 seq3127 89.7 4e-12 >seq3108 Length=23989115 Score = 156 bits (172), Expect = 3e-32 Identities = 462/706 (65%), Gaps = 11/706 (2%) Strand=Plus/Plus Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 || |||||||||||| || | | || | ||| | ||| | | |||| || | | Sbjct 13304429 TTGTCAAAATCTTCATCTACG---TGGGTGTCTCCAGCTTTAGATTTCACTTCAAAGATT 13304485 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 |||||||||| || | | | |||||| | ||||| | | ||||||| | || Sbjct 13304486 CCATCTTCAATAGTGAGGATTGACACATCAAAAATGCCACCTACTAAATCAAAAGTCAGC 13304545 Query 282311 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 282370 ||||| |||| | ||||| || || ||||| |||| ||||||||| ||||| Sbjct 13304546 ACATTTCTTTCAGCTCCAACCTTTTTGTCTAGGCCATAGGCAACAGCAGCAGCTGTTGGC 13304605 Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 282430 ||||| |||||||| || ||||||||||||||||| |||| ||| |||| || || || Sbjct 13304606 TCATTGATAATTCTAAATACATTAAGACCAGCAATGTTTCCAGCAACTTTGGTTGCCTGA 13304665 Query 282431 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCA 282490 | || || || ||||| || || || |||| | || |||| || || || ||| Sbjct 13304666 CACTGAGAGTCATTAAAGTAAGCTGGCTCAGTGACCACAGCATTGGTAACAGTCTTCCCA 13304725 Query 282491 ATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGA 282550 | |||||| ||| ||| ||||| || | | | ||| ||||| | || | |||| Sbjct 13304726 AGATAAGCTTCTGCAATTTCCTTCATCTTTGTCAGCACCATAGATGATACTTTCTTTGGA 13304785 Query 282551 GAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTA 282610 | | ||| | || || ||| |||| || | || | | |||| Sbjct 13304786 CAGAAGCTCTTTGTCTCTCCTTTGTATTCTACTGGAACTTTGGGCCT----GCCTCATTC 13304841 Query 282611 ATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT-CT 282669 | || | || ||||||| |||||||| || || ||| | ||| | |||||| | Sbjct 13304842 ACCACCATGAAGGGCCAATGCTTCATATCAGACTGGACAATAGCATCA-TGAAATCTACA 13304900 Query 282670 ACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTT 282729 ||| | | | || |||| |||| || |||| ||| || | ||| |||||| ||| Sbjct 13304901 TCCAGTCAGATGCTTGGCATTGAAAACTGTGTTGGCTGGTTTTATTGCCACTTGATTTTT 13304960 Query 282730 GGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCG 282789 || |||||| |||||| ||| || | | | || || || |||||| | | Sbjct 13304961 TGCAGCATCTTGAATCAGTCCTTCGGTGTTAATTACAGAGACGTAACTTGGAGTGATTTG 13305020 Query 282790 ATTACCTTGATCATTCGCAATAATTTCAACTTTACC-ATTTTGCCATACACCTACACAAC 282848 ||| | |||||||| ||||| || || ||||| || || | | ||| | ||||| Sbjct 13305021 ATTTTCCTGATCATT-GCAATGATCTCCACTTTTCCAATGCTAGAAGACATCCACACAGG 13305079 Query 282849 TAAAAGTTGTTCCTAAATCAATACCAATAGCAATTTTATCTGACAT 282894 || || || || | |||| |||||| |||| || | |||||| Sbjct 13305080 AGAAGGTGGTGCCAAGATCAGTACCAACAGCAGTTCCCTTTGACAT 13305125 >seq3124 Length=37078832 Score = 147 bits (162), Expect = 2e-29 Identities = 368/552 (67%), Gaps = 14/552 (3%) Strand=Plus/Minus Query 281777 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 281836 |||||||| |||||||| || ||||| || | | | | ||| | || ||| |||||||| Sbjct 25402231 GCACCATAAGCAACAGCCTCGTCAGGGTTGATACTCTTATTCAATTCTTTTCCATTGAAG 25402172 Query 281837 AAATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 281895 |||| | ||||||| ||| | ||| |||||||||| || || || || || ||||| Sbjct 25402171 AAATCTTGTAGAAGTT-TCTGGATCTTGGGAATACGAGTAGAACCACCCACCAAGACAAT 25402113 Query 281896 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 281955 ||||| | |||||| || || || || | ||| | | | || || || || || || Sbjct 25402112 GTCATGGATCTGTGACTTGTCAAGCTTAGCATCTCGCAGAGCCTTCTCCACAGGGTCTAG 25402053 Query 281956 ACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATT 282015 | | | ||||| ||| | | || ||||| ||| ||| | ||||| | | || Sbjct 25402052 AGTGCCACGAAACAGGTCAGCATTCAGCTCTTCAAATCGAGCACGAGTAATGGAGGTATA 25401993 Query 282016 ATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG 282075 | || || ||||| | | ||||||| ||||| | | ||| || ||||| || Sbjct 25401992 GAAGTCGATCCCTTCATAGAGGGAATCAATCTCAATACTGGCTTGGGTGCTGGAAGAGAG 25401933 Query 282076 TGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA-AG---GCTTTTGCTGATT 282131 | | ||||| ||||||||||| || | || | || | || ||| | || | | Sbjct 25401932 GGTTCTCTTAGCTCGTTCACATGCAGTGCGAAGACGGCGGACAGCTCTCTTGTTCTCACT 25401873 Query 282132 GATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACG 282189 ||| || | |||| || | |||||| || ||| | | ||| | || | || Sbjct 25401872 GAT----GTCCTTCTTATGCTTGCGCTTGAACTCAGCAATAAA--ATGGTTGACCATCCG 25401819 Query 282190 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 282249 || ||||||||||| || || || | || | ||| | |||| | |||||| |||| Sbjct 25401818 GTTGTCAAAATCTTCTCCACCTAAGTGGGTGTCTCCAGCTGTAGATTTTACTTCAAAAAT 25401759 Query 282250 TCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAG 282309 ||||||||||| || | | | |||||| || ||||| || | ||||||||| || Sbjct 25401758 TCCATCTTCAATAGTGAGGATTGACACATCAAAAGTGCCACCTCCTAAATCAAAAATCAG 25401699 Query 282310 TACATTCATTTC 282321 || || |||| Sbjct 25401698 CACGTTTCTTTC 25401687 Score = 116 bits (128), Expect = 3e-20 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || | ||||| |||| ||||||||| ||||| ||||| |||||||| | ||| Sbjct 25401594 TTTTTGTCTAAGCCATAGGCAATAGCAGCAGCTGTTGGCTCATTGATAATTCTAAGTACA 25401535 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 |||||||||||||| | || |||||||| || || || | || || || |||||||| Sbjct 25401534 TTAAGACCAGCAATGGTCCCAGCATCTTTGGTAGCCTGGCGCTGAGAGTCATTAAAATAA 25401475 Query 282452 GCAGGAACAGTAATAACGGCAT 282473 || || ||||||| || |||| Sbjct 25401474 GCTGGCACAGTAACCACAGCAT 25401453 >seq3129 Length=43247874 Score = 129 bits (142), Expect = 4e-24 Identities = 438/679 (65%), Gaps = 44/679 (6%) Strand=Plus/Minus Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 || |||||||| || || || || || | |||| |||| | | |||| ||| | | Sbjct 28183376 TTGTCAAAATCATCTCCACCTAAGGGGGTGTCACCTGCTGTAGATTTCACTTTGAAGATT 28183317 Query 282251 CCATCTTCAAGAGACAAAAGAGTA---ACATCATGGGTTCCACCACCCATATCAAAAATA 282307 ||| ||||| | || || | |||||| || | ||| || | ||||||||| Sbjct 28183316 CCACCTTCA---GTCATGAGGATTGACACATCAAAAGTGCTACCTCCTAAATCAAAAATC 28183260 Query 282308 AGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTT 282367 |||||||| |||| | ||||| || | ||||| |||| |||||| Sbjct 28183259 AGTACATTTCTTTCAACTCCAACCTTTTTGTCTAAGCCATAAGCAATAGCAGC------- 28183207 Query 282368 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 282427 ||||| ||||||| | ||||||||||||||||| |||| |||||||| || | Sbjct 28183206 ---TCATTGATAATTCCAAGTACATTAAGACCAGCAATGGTTCCAGCATCTTTGGT-TCC 28183151 Query 282428 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTT 282487 || | || || || ||||| || || || |||||| || |||| || || || Sbjct 28183150 TGACGCTGAGAGTCATTAAAGTAAGCTGGCCCAGTAACCACAGCATTGGTAACAGTCTTC 28183091 Query 282488 CCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCT 282547 |||| ||| ||| ||| |||| |||| || | | | | || || | | ||| Sbjct 28183090 CCAAGATACGCGTCTGCAGTTTCCTTCACCTTTGTCAGCACTGTAGAAGACACCTTCTCT 28183031 Query 282548 GGAGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACA 282607 ||| || | || ||| | || ||| ||||| || | || | || || Sbjct 28183030 GGACAAACT--CT----TTCTCTCTG-TATTCTACTTGAACCTTGGGCCTGCCTGCATCA 28182978 Query 282608 TTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT 282667 || | || |||| ||||||| |||| | | || || ||| | |||| | || | Sbjct 28182977 TTCACCACCATAAAGGGCCAATGCTTCACACCAGACTGGACAATAGCATCATCATCATAT 28182918 Query 282668 CTA---CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGA 282724 ||| ||||| | |||| ||||||||| || ||||| || || ||||| ||||| Sbjct 28182917 CTACGTCCAATCAGATGTTTGGCATCAAAAGCTGTGTTGGTGGGGTTCACTGCCACTTGA 28182858 Query 282725 TATTTGGCTGCATCTCCAATCAGATGTTCTG-----TCTCTG--------TAAATGAA-- 282769 | ||| || ||||||| || || |||| || |||||| | | |||| Sbjct 28182857 TTTTTTGCAGCATCTCTGATGAGTTGTTTTGCAGTATCTCTGATCAATCTTTAGTGAAAG 28182798 Query 282770 --ACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCAT 282827 ||||| |||||| || |||| || |||||||| ||||| || || ||||| |||| Sbjct 28182797 CGACATAACTTGGAGTGGTTTGATTTCCCTGATCATTGGCAATTATCTCCACTTTTCCAT 28182738 Query 282828 TTTGCCATACACCTACACA 282846 || | ||||| | ||| Sbjct 28182737 GCTGGGAGACACCCATACA 28182719 >seq3134 Length=59225736 Score = 122 bits (134), Expect = 7e-22 Identities = 771/1227 (63%), Gaps = 45/1227 (4%) Strand=Plus/Minus Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||| | |||| || ||||| |||||||||||||||||||||||| | || | Sbjct 50880721 GTCATGACTCCACTAGGAGTTTCAGTACCAAGAGAAAGAGGAGTGACATCCAAAAGCAGC 50880662 Query 281723 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 281782 | || ||||| |||||| | | ||| ||||| || || |||| ||| | |||| Sbjct 50880661 AAATCTTGAACATTTTCAGACTTATCTCCAGATAGAATGGCAGCCTGAACAGCTGAACCA 50880602 Query 281783 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-T 281841 || | |||||| || ||||| || | | | ||| |||| ||| ||||||||||| | | Sbjct 50880601 TAAGTAACAGCCTCCTCAGGGTTGATGCTCTTATTCAGTTCTTTTCCATTGAAAAAGTCT 50880542 Query 281842 TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATG 281901 || | || |||| | ||| || ||| || || || || ||| ||| | ||||| Sbjct 50880541 TGTAGGAGCTTGT-GGATCTTGGGGATATGAATAGAGCCACCCACTTGGACATTGTCATG 50880483 Query 281902 CACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGC 281961 | |||| | || || ||||| | ||| | | | || || | || || ||| | Sbjct 50880482 GATCTGTCACTTGTCAAGTTTGGCATCTTGAAGAGCCTTCTCCTCAGGGTCCAGAGTGCC 50880423 Query 281962 TCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATC 282021 | || | ||| | || ||||| || | ||| | ||||| | |||| || Sbjct 50880422 ACAGAATAGGTCCACATTCAGCTCTTCAAACTGAGCACAAGTAATGGAGACACAGATGTC 50880363 Query 282022 AATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACG 282081 ||||||||| | | ||||||| ||| || | | ||| | ||||| | | Sbjct 50880362 AATTCCTTCATAGAGGGAATCAATCTCAGTCCTGGCTTGGATGCTGGAAGAGAAGATTCT 50880303 Query 282082 TTTAGCACGTTCACATGCTGTCCTTAG-TCTTCGTAAGG---CTTTTGCTGATTGATTCA 282137 ||||| |||||||||| || || | | ||| ||| | || | |||| Sbjct 50880302 CTTAGCTTGTTCACATGCAGTATGAAGATGGCAGACAGGTCTCTTGTTCTCACTGAT--- 50880246 Query 282138 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAA 282197 || | | |||| || ||||| || || | | | | | | || |||| Sbjct 50880245 -ATTTTTCTTATGCTTGTGATTGAATTCAGTAATAAAACGATTGATCGTTTGGTTGTCAA 50880187 Query 282198 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 282257 |||||||| || | | |||| || | |||||| | | || || | || ||| | Sbjct 50880186 AATCTTCATCT---ACATGGGTATCTCTAGCTGTAGCTTTCAGTTCAAAGATTCTATCAT 50880130 Query 282258 CAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 282317 ||| || | | | |||||| || | || |||||| || | |||| Sbjct 50880129 CAATAGTGAGGAATGACACATCAAAAGT--------GCTGATAAAAAATCAGCATATTCC 50880078 Query 282318 TTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAA 282377 |||| | ||||| | | ||||| |||| ||||||||| |||| ||||| | Sbjct 50880077 TTTCAGCTCCAACCTTTTTGTTTAAGCCATAGGCAATAGCAGCAGCTGTTGACTCATTGA 50880018 Query 282378 TAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTG 282437 ||||||| | ||||||||||||||||| |||| | | || | || || || | Sbjct 50880017 TAATTCTAAGTACATTAAGACCAGCAATGGTTCCAGTACCT----TAGCCTGATGCTGAG 50879962 Query 282438 AATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAG 282497 | || ||||| | || ||||||| ||| ||| || || || |||| |||| Sbjct 50879961 AGTCATTAAA-----CTGGCACAGTAACAACAGCACTGGTAACAGTCTTCCCAAGATAAA 50879907 Query 282498 CGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATT 282557 || ||| ||| ||||| || ||| |||| || | | ||| | | | Sbjct 50879906 CGTCTGCAATTTCCTTCATCTTTGTTAGCATCA-----GACACCTCCACTGTATAGAAGC 50879852 Query 282558 GCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATT-AATAACT 282616 ||| | || ||| ||| ||||| || | ||| | || |||| || | Sbjct 50879851 TCTTTGTCTCTCTTTTGTATTCTACTTGAACCT-TGG--GCCTTCCTGCATTGTATGCCA 50879795 Query 282617 T--TAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT-CTACCA 282673 | | || ||||||| |||||||| || |||||| ||| ||||| || | ||| Sbjct 50879794 TCATGAAGGGCCAATGCTTCATATCAGACTGAACAACAGCATCA-TAAAAGCTACATCCA 50879736 Query 282674 ATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCT 282733 || | | || |||| |||| || |||||||| || || |||||| ||| || Sbjct 50879735 ATAAGATGCTTGGCATTGAAAACTGTGTTGGTTGGGTTCGTTGTCACTTGATTTTTTGCA 50879676 Query 282734 GCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTA 282793 |||||||||||||| |||| || | | || | | ||| |||| | || | ||| Sbjct 50879675 GCATCTCCAATCAGTTGTTTAGTGTTGGCGAAAGCAGTATAACTTGGAATAGTTCAATTT 50879616 Query 282794 CCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAA 282853 || |||||||| | || || || ||||| | | || | ||||| |||||| | Sbjct 50879615 CCCTGATCATTGG--ATTATCTCCACTTTTCAGTGCTGGAAGACACCCACACAAGAGTAG 50879558 Query 282854 GTTGTTCCTAAATCAATACCAATAGCA 282880 | || || | |||||| |||| |||| Sbjct 50879557 GCAGTGCCAAGATCAATGCCAACAGCA 50879531 >seq3114 Length=26790417 Score = 111 bits (122), Expect = 1e-18 Identities = 170/240 (71%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 281672 CCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGA 281731 |||||||| ||||| | |||||||||||||| || |||||| | || | | || ||| Sbjct 7927027 CCACCAGCCGTTTCAATACCAAGAGAAAGAGAAGAGACATCTAAAAGCAGCAAATCTTGG 7927086 Query 281732 AGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACA 281791 | |||| | | | ||| ||||| || || |||| ||| |||||||| ||||| Sbjct 7927087 ACATTTTTAGACTTGTCTCCAGATAGAATGGCAGCCTGAACAGCTGCACCATAAACAACA 7927146 Query 281792 GCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGT 281851 ||||||||||| || | | | | | | || ||| |||||||| || | | |||||| Sbjct 7927147 GCTTCATCAGGGTTGATGCTCTTACTCAATTCTTTTCCATTGAAGAAGTCTTGTAGAAGT 7927206 Query 281852 TGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGA 281910 | ||| | ||| |||||| ||| || | || || | ||||| ||||| | |||||| Sbjct 7927207 T-TCTGGATCTTGGGAATATGAGTAGAACTACCCACCAGGACAATGTCATGGATCTGTGA 7927265 Score = 100 bits (110), Expect = 2e-15 Identities = 122/165 (74%), Gaps = 1/165 (1%) Strand=Plus/Plus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || | | ||| |||| ||||||||| |||| || ||| |||||||| | ||| Sbjct 7927638 TTTTTGTCTAAGCAATAGGCAATAGCAGCAGCTGTTGCTT-ATTGATAATTCTAAGTACA 7927696 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 |||||||||||||| |||| |||||| | || || || || ||||| ||||| || Sbjct 7927697 TTAAGACCAGCAATAGTTCCAGCATCTGTGGTTGCCTGATGCTGAGAATCATTAAAGTAA 7927756 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAA 282496 || || ||||||| || |||| || || || |||| |||| Sbjct 7927757 GCTGGCACAGTAACCACAGCATTGGTAACAGTGTTCCCAAGATAA 7927801 >seq3099 Length=15920349 Score = 109 bits (120), Expect = 4e-18 Identities = 240/360 (67%), Gaps = 0/360 (0%) Strand=Plus/Minus Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 || ||||||||||| || || || | || | || | ||| | | |||| || | | Sbjct 2306941 TTGTCAAAATCTTCTCCACCTAAGTGGGTGTCACCAGCTATAGATTTCACTTCAAAGATT 2306882 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 |||||||||| || | | | |||||| || ||||| || | || |||||| || Sbjct 2306881 CCATCTTCAATAGTGAGGACTGACACATCAAAAGTGCCACCTCCTAAATAAAAAATCAGC 2306822 Query 282311 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 282370 ||||| |||| | ||||| || | ||||| |||| ||||||| | ||||| Sbjct 2306821 ACATTTCTTTCAGCTCCAATCTTTTTCTCTAAGCCATAGGCAATAGCAGCATCTGTTGGC 2306762 Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 282430 ||||| |||||||| | ||||||||||||||||| | | |||| ||| || || || Sbjct 2306761 TCATTGATAATTCTAAGTACATTAAGACCAGCAATGGCTGCAGCATTTTTGGTTGCCTGA 2306702 Query 282431 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCA 282490 || || ||||| || || || ||||||| || ||| | || || ||| Sbjct 2306701 TGATGACGGTCATTAAAGTAAGCTGGCACAGTAACTACAGCAATGATAACAGTCTTCCCA 2306642 Query 282491 ATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGA 282550 | |||||| | | |||| ||||| || | | | ||| ||||| | | |||||| Sbjct 2306641 AGATAAGCTTCTTCAGTTTCCTTCATCTTTGTCAGCACCATAGATGATACGTCCTCTGGA 2306582 Score = 98.7 bits (108), Expect = 7e-15 Identities = 184/262 (70%), Gaps = 10/262 (4%) Strand=Plus/Minus Query 281672 CCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACAT-CAACTAGGACAATATTTTG 281730 |||||||| ||||| | || |||||||||||||||||||| |||| | ||| || ||| Sbjct 2307415 CCACCAGCAGTTTCAATACTAAGAGAAAGAGGAGTGACATCCAACAACAGCAA-ATCTTG 2307357 Query 281731 AA-GTTTTTCATCAGTTTGAC--CAACAAGAATAGCTGCTTGAATAGCAGCACCATATGC 281787 || |||||| | ||| | ||| || || || || || ||||| | |||||| | Sbjct 2307356 AACGTTTTTGGAC---TTGTCTTCAAATAGGATGGCAGCCTGGATAGCTGAACCATAAAC 2307300 Query 281788 AACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAG 281847 |||||| |||||||| || | | | || | || ||| |||||||| || | | | Sbjct 2307299 AACAGCCTCATCAGGGTTGATGCTCTTCTTCAATTATTTTCCATTGAAGAAGTCTTGTGG 2307240 Query 281848 AAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCT 281906 ||| | ||| | ||| || |||| || | || || || | ||||| ||||| | || Sbjct 2307239 AAGCT-TCTGGATCTTGGGGATACAAGTAAAACCACCCACCAGGACAATGTCATGAATCT 2307181 Query 281907 GTGATTTATCCAGTTTTGAATC 281928 |||| || || || || | ||| Sbjct 2307180 GTGACTTGTCAAGCTTAGCATC 2307159 >seq3143 Length=88675666 Score = 98.7 bits (108), Expect = 7e-15 Identities = 183/263 (70%), Gaps = 7/263 (3%) Strand=Plus/Plus Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||| | |||||||| |||| | ||||| |||||||||||||||||| | || | Sbjct 45737275 GTCATGACTCCACCAGCAATTTCAATACCAACAGAAAGAGGAGTGACATCCAAGAGCAGC 45737334 Query 281723 ATATTTTGA--AGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCAC 281780 | || |||| ||||| | ||||| || ||| | | ||| |||| ||| |||| Sbjct 45737335 AAATCTTGAATAGTTTCAGACTTGTTTG--CAGATAGATTGGTTGCCTGAACAGCTGCAC 45737392 Query 281781 CATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT 281840 |||| ||||||| |||||| | || | | | ||| | || ||| ||| ||||||| | Sbjct 45737393 CATAATCAACAGCCTCATCAAGGTTGATCCTCTTATTCAATTCTTTTCCA-TGAAAAAGT 45737451 Query 281841 TTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCA 281899 | | ||||| | ||| | ||| || |||| | || || || || | ||||| | Sbjct 45737452 CTTATAGAAGCT-TCTGGATCTTGGGGATACTGGTAGAACCACCCACCAGGACAATGCTA 45737510 Query 281900 TGCACCTGTGATTTATCCAGTTT 281922 || | |||||| || || ||||| Sbjct 45737511 TGGATCTGTGACTTGTCTAGTTT 45737533 Score = 93.3 bits (102), Expect = 3e-13 Identities = 161/228 (71%), Gaps = 7/228 (3%) Strand=Plus/Plus Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTC---TTTGTCTTGG 282331 |||||| || ||| ||| | || |||||| || ||||| |||| | ||| Sbjct 45737803 ACATCAAAAGTAACACTACCTAAATAAAAAATCAGCACATTTCTTTCAGCTCCAACTTT- 45737861 Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 |||| ||| | | ||| |||| ||||||||| ||||||||||| |||||||| | ||| Sbjct 45737862 TTTTAATCTAAGCAATAAGCAATAGCAGCAGCTGTTGGTTCATTGATAATTCTGAGTACA 45737921 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 ||||||||||||| || | |||||||| || || || || | || || ||||| Sbjct 45737922 ATAAGACCAGCAATGGTTTCAGCATCTTTGGTTGCCTGATGCTGAAAGTCATT-AAATAA 45737980 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTACTTCTTTT-CCAATATAAGC 282498 || || ||||| | || ||| || || | |||| |||| ||||| Sbjct 45737981 GCTGGTACAGTGACCACAACAT-TGGTAATAGTTTTCCCAAGGTAAGC 45738027 >seq3127 Length=41527808 Score = 89.7 bits (98), Expect = 4e-12 Identities = 182/266 (68%), Gaps = 7/266 (3%) Strand=Plus/Minus Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||| | ||| |||| || | | ||||||||||||||||| ||||| | || | | Sbjct 10662855 GTCATGACTCCAGCAGCAATTGCAATACCAAGAGAAAGAGGAGCAACATCCAAAAGCAGA 10662796 Query 281723 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 281782 | |||||||| |||| | | | ||| ||||| ||||| || | ||| |||||| Sbjct 10662795 A-ATTTTGAACATTTTTAGACTTGTTTCCAGATAGAATGGCTGCCTGTAAAGCTGCACCA 10662737 Query 281783 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT 281842 | ||| |||| |||| || ||| ||| | ||| || ||| ||| |||| || | | Sbjct 10662736 TGAGCAGCAGCCTCATTAGCATTGACA----CTCTTAATTATTTTCCACTGAAGAAGTCT 10662681 Query 281843 GAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 281902 | |||| | | | | ||| || ||| | | || || || |||| ||||| | || Sbjct 10662680 TACAGAAACT-TATGAACTT-GGGATATGGGTAGAACCACCCACTAGGACAATGTTATAG 10662623 Query 281903 ACCTGTGATTTATCCAGTTTTGAATC 281928 | |||||| || || ||||| | ||| Sbjct 10662622 ATCTGTGACTTGTCTAGTTTAGCATC 10662597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740476042886544