Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cavia_20porcellus_20[refseq_20GCF_5F000151735.1_202008-03-03]
3,144 sequences; 2,723,219,641 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq3106 205 1e-46
seq3105 185 1e-40
seq3141 170 3e-36
seq3035 158 2e-32
seq3137 140 5e-27
>seq3106
Length=22756556
Score = 205 bits (226), Expect = 1e-46
Identities = 407/591 (69%), Gaps = 19/591 (3%)
Strand=Plus/Plus
Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775
|| || |||||| | || ||||| ||||||||| | ||||| ||| |||||
Sbjct 216656 GAACCACTGCTGAGAGAGAACCCCCGGCGCTTTGTCATCTTCCCTATCGAATACCATGAC 216715
Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT 1455835
|| ||| | ||||| | |||| ||||||||||||||||||| || |||||||| || ||
Sbjct 216716 ATTTGGCAGATGTATAAGAAAG-CCGAGGCCTCCTTTTGGACGGCAGAGGAGGTGGATCT 216774
Query 1455836 CGGCGCCGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCA 1455895
| |||| ||||||| | |||| ||| ||| | | || || ||
Sbjct 216775 TTCCAAAGACATTCAGCACTGGGAAGCCCTGAAGCCCGAGGAGAGATACTTTATATCACA 216834
Query 1455896 CGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCT 1455955
||| || || || ||| ||||||||||||||||| || ||||| ||| | || |
Sbjct 216835 CGTTCTGGCTTTCTTT-GCCGCCAGCGATGGCATAGTCAATGAGAATTTGGTGGAGCGGT 216893
Query 1455956 TTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCG 1456015
| | |||| || ||| | ||||||| || | || ||||| |||||||||||||| |
Sbjct 216894 TCAGCCAAGAAGTTCAAATCACAGAGGCTCGCTGTTTCTACGGCTTCCAGATCGCCATGG 216953
Query 1456016 AAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCG 1456075
||||||| || ||||||| ||| ||||| ||||| || || |||| || | |
Sbjct 216954 AAAACATTCATTCTGAAATGTACAGTCTCCTCATCGATACTTATATCAAAGATTCCAGAG 217013
Query 1456076 AGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACT 1456135
| | ||| |||||| |||||||| || |||| | ||| ||| ||| | ||||
Sbjct 217014 AAAGGGAGTTCCTCTTCAATGCCATCGAGACCATGCC--CTGTG-TGAAGAAGTCGGACT 217070
Query 1456136 GGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTT-TGCCGAGCGGCTCGTCG 1456191
|||| || ||||| |||| ||| | ||||| || || || | || |
Sbjct 217071 GGGCCTTGCGCTGGATTGGGGACAAAGAG------GCCACTTATGGGGAACGCGTGGTAG 217124
Query 1456192 GCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCATCTTTTGGCTC 1456249
|||||| | ||| || ||||||||||| || || ||| |||| | ||||| |||||
Sbjct 217125 CCTTTGCTGCCGTGGAAGGCATCTTTTTTTCTGGTTCTTT-TGCGTCGATCTTCTGGCTG 217183
Query 1456250 AAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAG 1456300
||||| || || ||||||||||| | || |||| ||| ||| | |||||
Sbjct 217184 AAGAAACGGGGACTCATGCCCGG-CCTCACCTTTTCCAATGAACTCATCAG 217233
>seq3105
Length=21505965
Score = 185 bits (204), Expect = 1e-40
Identities = 179/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||||||||||||||||||| || || |||| || |||| |||||
Sbjct 20450644 TACAAGGTGCTCAAGCAGGTGCACCCCGACAC-----GGGCATC-TCTTCCAAGGCCATG 20450591
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| | |||||| |||
Sbjct 20450590 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCGTCGCGC 20450531
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| |||| ||||||||||| ||||||||
Sbjct 20450530 CTGGCGCACTACAACAAGCGCTCCACCATCACGTCGCGGGAGATCCAGACTGCCGTGCGG 20450471
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| || ||||||||||
Sbjct 20450470 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCGGAGGGCACCA 20450422
Score = 185 bits (204), Expect = 1e-40
Identities = 179/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||||||||||||||||||| || || |||| || |||| |||||
Sbjct 20495519 TACAAGGTGCTCAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 20495572
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| | |||||| |||
Sbjct 20495573 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCGTCGCGC 20495632
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| |||| ||||||||||| ||||||||
Sbjct 20495633 CTGGCGCACTACAACAAGCGCTCCACCATCACGTCGCGGGAGATCCAGACTGCCGTGCGG 20495692
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| || ||||||||||
Sbjct 20495693 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCGGAGGGCACCA 20495741
Score = 185 bits (204), Expect = 1e-40
Identities = 179/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||||||||||||||||||| || || |||| || |||| |||||
Sbjct 20516803 TACAAGGTGCTCAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 20516750
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| | |||||| |||
Sbjct 20516749 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCGTCGCGC 20516690
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| |||| ||||||||||| ||||||||
Sbjct 20516689 CTGGCGCACTACAACAAGCGCTCCACCATCACGTCGCGGGAGATCCAGACTGCCGTGCGG 20516630
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| || ||||||||||
Sbjct 20516629 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCGGAGGGCACCA 20516581
Score = 176 bits (194), Expect = 6e-38
Identities = 177/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||||||||||||||||||| || || |||| || |||| |||||
Sbjct 20508853 TACAAGGTGCTCAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 20508906
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| | || ||||||| | |||||| |||
Sbjct 20508907 GGCATCATGAACTCCTTCGTCAACGACATTTTTGAGCGCATCGCCGGCGAGGCGTCACGC 20508966
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || ||||||||| ||| ||| |||| ||||||||||| ||||||||
Sbjct 20508967 CTGGCGCACTACAACAAGCGATCCACCATCACGTCGCGGGAGATCCAGACGGCCGTGCGG 20509026
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| || ||||||||||
Sbjct 20509027 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCGGAGGGCACCA 20509075
Score = 176 bits (194), Expect = 6e-38
Identities = 177/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||||||||||||||||||| || || |||| || |||| |||||
Sbjct 20572136 TACAAGGTGCTCAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 20572189
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| || || | | |||||| |||
Sbjct 20572190 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGTATTGCCGGCGAGGCGTCGCGC 20572249
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| |||| ||||||||||| ||||||||
Sbjct 20572250 CTGGCGCACTACAACAAGCGCTCCACCATCACGTCGCGGGAGATCCAGACGGCCGTGCGG 20572309
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| || ||||||||||
Sbjct 20572310 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCGGAGGGCACCA 20572358
Score = 158 bits (174), Expect = 2e-32
Identities = 173/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
|||||||||||||| ||||||||||| || | ||| || |||| |||||
Sbjct 20382451 TACAAGGTGCTCAAACAGGTGCACCCAGACACAGG-----CATT-TCGTCCAAGGCCATG 20382398
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| |||||| |||
Sbjct 20382397 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCAGGCGAGGCATCGCGC 20382338
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| |||| ||||||||||| || ||| |
Sbjct 20382337 CTGGCGCACTACAACAAGCGCTCCACCATCACGTCGCGGGAGATCCAGACTGCTGTGAGG 20382278
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||| ||||||||||||||||
Sbjct 20382277 CTGTTGCTGCCCGGGGAGCTGGCCAAGCACGCTGTCTCCGAGGGCACCA 20382229
Score = 149 bits (164), Expect = 9e-30
Identities = 171/229 (75%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||||||||||||||| ||| || || |||| || |||| |||||
Sbjct 20553505 TACAAGGTGCTCAAGCAGGTGCATCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 20553558
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|| |||||||| || ||||||||||| |||| ||||||| | |||||| |||
Sbjct 20553559 GGCATTATGAACTCTTTCGTCAACGACATCTTCGAACGCATCGCCGGCGAGGCGTCGCGC 20553618
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||| ||| ||| ||| |||| ||||||||||| ||||| ||
Sbjct 20553619 CTGGCGCACTACAACAAACGCTCCACCATCACGTCGCGGGAGATCCAGACGGCCGTCCGA 20553678
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| || || || |||| ||| || || || ||||||||||
Sbjct 20553679 CTGCTGCTGCCAGGAGAGCTAGCCAAGCATGCTGTGTCAGAGGGCACCA 20553727
Score = 102 bits (112), Expect = 1e-15
Identities = 168/237 (71%), Gaps = 14/237 (6%)
Strand=Plus/Plus
Query 724910 TATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTC 724969
||||||||||||||| |||||||| || || || || |||| ||| ||| |
Sbjct 19952219 TATCTACAAGGTGCTAAAGCAGGTTCATCCAGACAC-----GGGCATC-TCCTCAAAGGC 19952272
Query 724970 CATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGC--ATCGGCACCGAGGCC 725027
||| ||| |||| || |||||| ||||| | || || |||| ||||||
Sbjct 19952273 TATGAGCATCTTGAATTCCTTTGTCTCTGACATATTTGAACGGGTATCGTG--CGAGGCA 19952330
Query 725028 GGTCGCCTGGCGCGCTCCAACAAGCG--CAACACGATCGGCACGCGCGAGATCCAGACCG 725085
|||||||| | || ||||||||| |||| || |||| | |||||||||| |
Sbjct 19952331 TCACGCCTGGCACACTACAACAAGCGTTCAACCATTTCATCACGGG--AGATCCAGACGG 19952388
Query 725086 CCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
| ||||| ||| | ||| ||| || ||||||| |||||| || |||||||||||||
Sbjct 19952389 CTGTGCGGCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCTGTGTCCGAGGGCACCA 19952445
>seq3141
Length=78381119
Score = 170 bits (188), Expect = 3e-36
Identities = 176/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| |||| |||| || |||| |||||
Sbjct 10969295 TACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 10969242
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| |||||| |||
Sbjct 10969241 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCTGGCGAGGCGTCGCGC 10969182
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||| | || |||||||||| || ||| | |||||||||||||| |||||||||
Sbjct 10969181 CTGGCACACTACAACAAGCGCTCGACCATCACGTCCCGCGAGATCCAGACGGCCGTGCGC 10969122
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||||| ||||||| ||||||||| || ||||||||||
Sbjct 10969121 CTGCTGCTGCCGGGCGAGCTGGCCAAGCACGCCGTGTCGGAGGGCACCA 10969073
Score = 167 bits (184), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 10937033 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 10937086
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||| |||||| || ||||| ||||| |||| ||||||| |||||| ||||
Sbjct 10937087 GGCATCACGAACTCCTTCGTCAATGACATCTTCGAGCGCATCGCTGGCGAGGCGTCTCGC 10937146
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||| | || |||||||||| || ||| | |||||||||||||| |||||||||
Sbjct 10937147 CTGGCACACTACAACAAGCGCTCGACCATCACGTCCCGCGAGATCCAGACGGCCGTGCGC 10937206
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||||| ||||||| ||||||||| || ||||||||||
Sbjct 10937207 CTGCTGCTGCCGGGCGAGCTGGCCAAGCACGCCGTGTCGGAGGGCACCA 10937255
Score = 167 bits (184), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 10948684 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 10948631
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||| |||||| || ||||| ||||| |||| ||||||| |||||| ||||
Sbjct 10948630 GGCATCACGAACTCCTTCGTCAATGACATCTTCGAGCGCATCGCTGGCGAGGCGTCTCGC 10948571
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||| | || |||||||||| || ||| | |||||||||||||| |||||||||
Sbjct 10948570 CTGGCACACTACAACAAGCGCTCGACCATCACGTCCCGCGAGATCCAGACGGCCGTGCGC 10948511
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||||| ||||||| ||||||||| || ||||||||||
Sbjct 10948510 CTGCTGCTGCCGGGCGAGCTGGCCAAGCACGCCGTGTCGGAGGGCACCA 10948462
Score = 152 bits (168), Expect = 7e-31
Identities = 172/229 (75%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| ||||| |||| |||| || |||| |||||
Sbjct 10917661 TACAAGGTGCTGAAGCAGGTCCACCCGGACACCGG-----CATC-TCGTCCAAGGCCATG 10917608
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| |||||| |||
Sbjct 10917607 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCTGGCGAGGCGTCGCGC 10917548
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||| | || |||||||||| || ||| | || ||||||||||| |||||||||
Sbjct 10917547 CTGGCACACTACAACAAGCGCTCAACCATCACGTCCCGTGAGATCCAGACGGCCGTGCGC 10917488
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||||| ||||||| ||| ||||| || ||||||||||
Sbjct 10917487 CTGCTGCTGCCAGGCGAGCTGGCCAAGCATGCCGTGTCAGAGGGCACCA 10917439
>seq3035
Length=4563218
Score = 158 bits (174), Expect = 2e-32
Identities = 173/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||| |||||||| || || |||| || |||| |||||
Sbjct 1658511 TACAAGGTGCTGAAGCAAGTGCACCCGGACAC-----GGGCATC-TCGTCCAAGGCCATG 1658458
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||||||||| |||||||| |||| ||||||| |||||| |||
Sbjct 1658457 GGCATCATGAACTCGTTTGTGAACGACATCTTCGAGCGCATCGCGGGCGAGGCTTCGCGC 1658398
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| ||||||||
Sbjct 1658397 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCTCGGGAGATCCAGACGGCCGTGCGT 1658338
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||| || || ||||||||||
Sbjct 1658337 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCGGTGTCGGAGGGCACCA 1658289
Score = 152 bits (168), Expect = 7e-31
Identities = 172/229 (75%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||| |||||||| || || |||| || |||| |||||
Sbjct 1624117 TACAAGGTGCTGAAGCAAGTGCACCCGGACAC-----GGGCATC-TCGTCCAAGGCCATG 1624064
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| || |||||||| |||| ||||||| |||||| |||
Sbjct 1624063 GGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCGGGCGAGGCTTCGCGC 1624004
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| ||||||||
Sbjct 1624003 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCTCGGGAGATCCAGACGGCCGTGCGT 1623944
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||| || || ||||||||||
Sbjct 1623943 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCGGTGTCGGAGGGCACCA 1623895
Score = 152 bits (168), Expect = 7e-31
Identities = 172/229 (75%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||| |||||||| || || |||| || |||| |||||
Sbjct 1645201 TACAAGGTGCTGAAGCAAGTGCACCCGGACAC-----GGGCATC-TCGTCCAAGGCCATG 1645254
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| || |||||||| |||| ||||||| |||||| |||
Sbjct 1645255 GGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCGGGCGAGGCTTCGCGC 1645314
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| ||||||||
Sbjct 1645315 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCTCGGGAGATCCAGACGGCCGTGCGT 1645374
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||| || || ||||||||||
Sbjct 1645375 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCGGTGTCGGAGGGCACCA 1645423
Score = 143 bits (158), Expect = 4e-28
Identities = 170/229 (74%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| || || |||||||| || || |||| || |||| |||||
Sbjct 1665556 TACAAGGTGCTGAAACAAGTGCACCCGGACAC-----GGGCATC-TCGTCCAAGGCCATG 1665609
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| || |||||||| |||| ||||||| |||||| |||
Sbjct 1665610 GGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCGGGCGAGGCTTCGCGC 1665669
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | || ||||||||||| ||||||||
Sbjct 1665670 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCTCGGGAGATCCAGACGGCCGTGCGT 1665729
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | | | ||| || ||||||| |||||| || || ||||||||||
Sbjct 1665730 CTGCTGCTCCCCGGGGAGCTGGCCAAGCACGCGGTGTCGGAGGGCACCA 1665778
Score = 134 bits (148), Expect = 2e-25
Identities = 168/229 (73%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||| |||||||| || || |||| || |||| | |||
Sbjct 1914893 TACAAGGTGCTGAAGCAAGTGCACCCGGACAC-----GGGCATC-TCGTCCAAGGCTATG 1914946
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| || |||||||| |||| ||||||| ||||| |||
Sbjct 1914947 GGTATCATGAACTCGTTCGTGAACGACATTTTCGAGCGCATCGCGGGTGAGGCGTCGCGC 1915006
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || ||||||||| || ||| | || ||||||||||| ||||||||
Sbjct 1915007 CTGGCGCACTACAACAAGCGTTCGACCATCACATCTCGGGAGATCCAGACGGCCGTGCGT 1915066
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||| || || || |||||||
Sbjct 1915067 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCGGTGTCGGAAGGCACCA 1915115
>seq3137
Length=61187194
Score = 140 bits (154), Expect = 5e-27
Identities = 168/229 (73%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || | | | ||| ||| |||||
Sbjct 599638 TACAAGGTGCTGAAGCAGGTGCACCCCGACACAGGCATGTCTTCC------AAGGCCATG 599585
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| | ||||||||||| |||| | ||||| || |||||| |||
Sbjct 599584 GGCATCATGAACTCCATCGTCAACGACATCTTCGAGCACATCGCCATCGAGGCGTCGCGC 599525
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || || ||||||| || |||| || | ||| | | ||| |||||||||
Sbjct 599524 CTGGCGCACTACAGCAAGCGCTTGACCATCGTGTCGGGAGAGGTGCCGACGGCCGTGCGC 599465
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| || | |||| |||
Sbjct 599464 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCTGCGGGCCCCA 599416
Score = 105 bits (116), Expect = 1e-16
Identities = 134/185 (72%), Gaps = 6/185 (3%)
Strand=Plus/Plus
Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971
||||||||||||| ||||||||||||||| || | | | ||| ||| |||
Sbjct 587353 TCTACAAGGTGCTGAAGCAGGTGCACCCCGACACAGGCATGTCTTCC------AAGGCCA 587406
Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031
|| ||||||||||| || ||||| ||||| |||| ||||||| || |||||| |
Sbjct 587407 TGGGCATCATGAACTCCTTCGTCAATGACATCTTCGAGCGCATCGCCATCGAGGCTTCGC 587466
Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091
||||||||| || || ||||||| || ||| || | ||| | | || |||||||
Sbjct 587467 GCCTGGCGCACTACAGCAAGCGCTTGACCATCCTGTCGGGAGAGGTGCCCACGGCCGTGC 587526
Query 725092 GCCTG 725096
|||||
Sbjct 587527 GCCTG 587531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177507955421328
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |