Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cavia_20porcellus_20[refseq_20GCF_5F000151735.1_202008-03-03]
3,144 sequences; 2,723,219,641 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq3106 87.8 6e-12
>seq3106
Length=22756556
Score = 87.8 bits (96), Expect = 6e-12
Identities = 110/150 (73%), Gaps = 1/150 (1%)
Strand=Plus/Plus
Query 443715 GTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTG 443774
|| || ||||||| || ||||| | || ||| || |||| || || ||||||||
Sbjct 217121 GTAGCCTTTGCTGCCGTGGAAGGCATCTTTTTTTCTGGTT-CTTTTGCGTCGATCTTCTG 217179
Query 443775 GTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGA 443834
| |||| || || ||||| |||| ||| || |||||| || ||||| ||||| | ||
Sbjct 217180 GCTGAAGAAACGGGGACTCATGCCCGGCCTCACCTTTTCCAATGAACTCATCAGCAGAGA 217239
Query 443835 CGAGGGTTTGCATTGCGACTTCGCCTGTCT 443864
||||| |||| || ||||||||||| ||
Sbjct 217240 TGAGGGCCTGCACTGTGACTTCGCCTGCCT 217269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588272017855080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |