Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cavia_20porcellus_20[refseq_20GCF_5F000151735.1_202008-03-03]
3,144 sequences; 2,723,219,641 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq3143 82.4 8e-11
>seq3143
Length=88675666
Score = 82.4 bits (90), Expect = 8e-11
Identities = 84/110 (76%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 60002 CGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGG 60061
|||||| || | |||||||| || || || ||||| |||||||| || ||| | ||
Sbjct 4807039 CGTGGAGGGCGTGTTCTTCTCGGGGTCCTTTGCGGCTATCTTCTGGCTGAAGAAGAGAGG 4807098
Query 60062 CCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGG 60111
|||| |||| ||||| | |||||||||||||| || | |||||||||
Sbjct 4807099 CCTCCTGCCCGGCCTCACCTTCTCCAACGAGCTCATCAGCAGGGACGAGG 4807148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548503242975360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |