Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cavia_20porcellus_20[refseq_20GCF_5F000151735.1_202008-03-03]
3,144 sequences; 2,723,219,641 total letters
Query= NC_028238.1
Length=188534
Score E
Sequences producing significant alignments: (Bits) Value
seq3139 96.9 4e-15
>seq3139
Length=61496919
Score = 96.9 bits (106), Expect = 4e-15
Identities = 118/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 32670 GCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCATA 32729
|||||||||| || || | |||||||| | || ||| | || || | || || ||
Sbjct 52688634 GCCTTGTGGTGGTACTTCGTATCTAAAGGAGTGGAGTATTTGGACACAGTATTTTTTATC 52688575
Query 32730 ATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTT 32789
|||| |||||| ||||||||| || |||||||| || || || | |||||||||
Sbjct 52688574 CTGAGGAAGAAAAACAACCAAGTTTCTTTCTTGCACGTGTATCATCACTGTACCATGTTC 52688515
Query 32790 ACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830
|| | | ||||| || ||||| ||| |||||||||||||
Sbjct 52688514 ACACTGTGGTGGATTGGAATTAAGTGGGTTGCAGGAGGACA 52688474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 603157094994560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |