Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cavia_20porcellus_20[refseq_20GCF_5F000151735.1_202008-03-03]
3,144 sequences; 2,723,219,641 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq3129 120 2e-22
>seq3129
Length=43247874
Score = 120 bits (132), Expect = 2e-22
Identities = 125/164 (76%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267
|| || |||||||| || |||||||| ||||| || | ||||||||| ||||| |||||
Sbjct 41738265 AGGCCCGTGACGTGCGCAATCATGTAGGTGAGCAGGGCGTAGCTGGCAATGTTGAAGGGC 41738206
Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327
|| || || ||||||||||| || | |||||| |||||||| || | || || |
Sbjct 41738205 ACGCCCAGGCCCATGTCCCCAGAGCGCTGGTACAGCTGACAGGACAATTCCCCGTTCACC 41738146
Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAG 27371
||||| ||||| || | || ||| || ||||| || ||||| ||
Sbjct 41738145 ACGTAGAACTGGCAGAGGGTGTGACAGGGAGGCAGCGCCATCAG 41738102
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369493041407864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |